Details from NCBI annotation

Gene Symbol Usp43
Gene Name ubiquitin specific peptidase 43, transcript variant X3
Entrez Gene ID 101723762

Database interlinks

Part of NW_004624786.1 (Scaffold)

For more information consult the page for NW_004624786.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

USP43 ENSG00000154914 (Human)

Gene Details

ubiquitin specific peptidase 43

External Links

Gene Match (Ensembl Protein ID: ENSP00000285199, Human)

Protein Percentage 84.86%
CDS Percentage 84.65%
Ka/Ks Ratio 0.15008 (Ka = 0.0845, Ks = 0.5629)

Usp43 ENSMUSG00000020905 (Mouse)

Gene Details

ubiquitin specific peptidase 43

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000021288, Mouse)

Protein Percentage 81.81%
CDS Percentage 81.99%
Ka/Ks Ratio 0.15014 (Ka = 0.1033, Ks = 0.6877)

Usp43 ENSRNOG00000003785 (Rat)

Gene Details

ubiquitin specific peptidase 43 (Usp43), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000062751, Rat)

Protein Percentage 80.28%
CDS Percentage 80.54%
Ka/Ks Ratio 0.15296 (Ka = 0.1149, Ks = 0.7511)

Genome Location

Sequence Coding sequence

Length: 3366 bp    Location: 12050297..12117919   Strand: +
>XM_004857520.1
ATGGAGCCGGGCCTGGGGGACGCGGCGGGAGAGGGGCGGCCCGCGCCCCGGCCCCGCCGCCGCCGCTCCCTGCGCCGCCTGCTTCACCGCTTCCTGCTGGCGCTGGGCAGCCGCTCTCGCCCTAGGGACTCTCCGCCCCGGCCCCAGCCCCACGCCCAGCCCGGACACTGCGATGGCGACGGCGAGGGGGGCTTTGCCTGCGCCCCGGGCCCGGCTCCAGCGGCCCCCGGGAGCCCCGGAGCGGAGCGACCCCCCGCGCCCCAGCTCCAGCTCCCCGCGGGCAACGGGGCGCGGCCGCCGGGCGCTCAGGGTTTGAAGAACCACGGTAACACCTGCTTCATGAACGCCGTGGTGCAGTGCCTCAGCAACACCGATCTGCTGGCCGAGTTCCTGGCGCTCGGGCGCTACCGGGCGGCGCCGGGCCGCGCCGAGGTCACCCAGCAGCTGGCGGCGCTGGTGCGCGCGCTCTGGACCCGCGAGTACACGCCCCAACTTTCCGCCGAGTTCAAGAATGCTGTTTCCAAGTATGGCTCCCAGTTCCAAGGCAATTCCCAACATGACGCCCTGGAATTCCTGCTCTGGTTACTGGACCGTGTCCACGAGGACTTGGAGGGCTCTTCCCGAGGGCTGGTCGCCTCCCAACTGTTGCCTGAAGCCAGTAAAACCCCTGAGAACCTCCAGTCCTCATCAGCTCAGCTTTCTCTAGGCCAGAGCTTTGTGCAAAGCCACTTTCAAGCACAATACAGATCTTCTTTGACATGTCCCCACTGCCTGAAACAGAGCAACACCTTTGACCCCTTCCTGTGCGTGTCCCTTCCGATCCCCTTGCGCCAGACGAGATTCTTGACCGTCACGTTGGTCTTCCCCTGTAAGAGTCAGCGGTTCCTGCGGGTTGGCCTGGCCGTGCCAATCCTAAGCACAGTGGCCGCTCTGAGGAAGATGGCGGCGGAGGAAGGCGGAGTCCCTGCTGATGAGGTCATCTTAGTTGAGCTGTATCCCAACGGATTCCAGAGGTCTTTCTTTGATGAAGAGGACTTGAATACCATAGCAGAGGGAGACAATGTGTATGCCTTCCAAGTCCCTCCATCTCCCAGCCAGGGGACACTCTCAGCTCATGCACCCAGTCTGCCATTGTCCCCGCGCTTGGTGGCCCAAGAGGGTCAGCGATTCTCCCTGCCTCTCCACAGTGAGAACAAAGTGCTCATCCTCTTCTGTAACCTGGTGGGCTCAGGCCAGCAGGCCAGCAGGTTTGGACCTCCTTTCCTGATAAGGGAAGACAGGACCATTTCCTGGGCCCAGCTCCAGCAGTGTATCCTCAGTAAGGTCCGCTGTCTCATGAGGAGTGATGCCCCTGCCCAGAACCTGGGGTCTCTGTTCTCCATCCGGGTTGTGGGACTGCCCTTGGCCTGCAGCTACTTGTCCCCACTGGACAGTCGGCCCCTTTGCCACTGGGCAGTGGACAGGGCTTTGCACCTCAGGAGGCCTGGAGGCCCACCCCATGTCAAGTTGGCTGTGGAGTGGGACTGTGCCACCAAGGAGTGCCTGTTTGGGAGCCTCCAGGAGGAGCAAGTCCCTGACGCAGACAGCGTGTGGCGGCAACAGCAGGCACACCAGCAGCCCAGCTGTACCCTGGATGAGTGCTTTCAGTTCTACACCAAGGAGGAGCAGTTGGCCCAGGATGACGCATGGAAGTGCCCCCACTGCAAAGTCCTCCAGCAGGGTATGGTGAAGCTGAGTCTGTGGACACTGCCCAACATCCTCATCATCCACCTCAAGAGGTTCTGTCAGGTGGGGGAGAGAAGGAACAAGCTGTCCACACTCATCAAGTTTCCACTCTCGGGACTCGACATGGCTCCCCACGTGGCTCAGAGGAGTACCAGCTGCAAGCCGGTGCCAGGTCCCTGGCCCTCCTGGAAGCAGCCAGCCAGCCTGCCCACCTCCTACCCAGTGGACTTCCTGTACGATTTGTATGCTGTCTGTAACCACCACGGCAGCCTGCAAGGTGGGCATTACACAGCTTACTGCCGGAACTCTCTGGATGGCCAGTGGTACAGCTATGATGACAGCACAGTGGAGCCCATTCAGGAAGACGAGGTCAACACCAGAGGGGCATACATCCTATTTTATCAGAAGCGGAACAGTATCCCTCCATGGTCGGCCAGCAGCTCCATGAGAGGCTCCACCAGCTCCTCCTTGTCTGACCACTGGCTCATGAGGCTCGGGAGCAACAGCGGCAACAGCACCCGAGGCAGCCTGCTGTCCTGGAGCTCTACCCCCTGCCCCTCACTGGCCCGGGTGCCCGACTCTCCTATCTCCACAAACAGCCTCTGCCACCAGGAGAAGGGAGGGTTGGAGTCCAGGCCTCTGGTTCGGGGTGCCTGCAGCAGAAGCATTAGCATGAAGGTGCCCACCGCATCCCGAGCCAGCCAGGGGCCCTTTAAGACCATGCCCCTCCGGTGGTCCTTCGGGCACAGGGAGAAGCGACCTGGTGCATCTGTGGAGTTGGTGGAGTACCTGGAGTCCAGACGCAGACCTCGTCGAACTACCAGCCAGTCCATTGTGCCACTGCTGACTGGCTCGGCTGGAGGGGATGAGAAGTCAGCATCTCCCAGGTCACATGGTACCCTTTCTGTTGAAGACAGTGGCCAAGCTAATGGGAGGGTGCCCCGTCCCTCAGGCCCCCCAGACCACCCCCCGGCCACTGGAAACTCTGATGTTCTAAACACAACCAGGACACGGAAGGAAAATGCAAGTCAGGATATCCGGCTTCCCAAAAAGTTTGACCTGCCCCTCACTGTGATGCCCTCCCTTGGGAATGAGAAGCCAGCCCGCCCAGAGGGCCAGAAGACCTCCAGCTGGAAGGGAAGCCAGAGCAGCCCACCGTCCCCCTCCGTAGGTTTGTCTAGAAACTGTCAGGACAGTGGCCAAGGGACCTTACCCAAGGTGAGGGCTGCAGCGGAGGAGAGGGCCTCCGAGAAGGACAGACTCCCACAAAGCACGTTCACCCTGCTGAGGTCTGTGTTTTGGAAGAAGGAGAGCCGGAAGCCAGACAGGGCCTCCGGCTCCCTGGGGAGTGGCCGGCTGAGCCCTGCTGTGGACAAACAGGCTCCAGGCTCCTCTCCTGCACTCAGGATTCCCGAGGGCCTGGCCAGAGGCCTGGGCGGCCGCCTCGAGAGGGATGTCCGGTCTGCGCCCAGCTCGATCCACCTCCCCCGCAAGGCCAGCAGGTTCCCAAGACCCAGTGCCACCAGCTTCTCACAGAAGAGTGTTCCCGGGGAGCAGACTTCTTATGGCACCTTGCAGAGGGTGAAATACCACACTCTTTCCTTAGGGCGCAAGAAAACCCTACCAGAGTCCAGCTTCTGA

Related Sequences

XP_004857577.1 Protein

Usp43 PREDICTED: ubiquitin carboxyl-terminal hydrolase 43 isoform X3 [Heterocephalus glaber]

Length: 1121 aa     
>XP_004857577.1
MEPGLGDAAGEGRPAPRPRRRRSLRRLLHRFLLALGSRSRPRDSPPRPQPHAQPGHCDGDGEGGFACAPGPAPAAPGSPGAERPPAPQLQLPAGNGARPPGAQGLKNHGNTCFMNAVVQCLSNTDLLAEFLALGRYRAAPGRAEVTQQLAALVRALWTREYTPQLSAEFKNAVSKYGSQFQGNSQHDALEFLLWLLDRVHEDLEGSSRGLVASQLLPEASKTPENLQSSSAQLSLGQSFVQSHFQAQYRSSLTCPHCLKQSNTFDPFLCVSLPIPLRQTRFLTVTLVFPCKSQRFLRVGLAVPILSTVAALRKMAAEEGGVPADEVILVELYPNGFQRSFFDEEDLNTIAEGDNVYAFQVPPSPSQGTLSAHAPSLPLSPRLVAQEGQRFSLPLHSENKVLILFCNLVGSGQQASRFGPPFLIREDRTISWAQLQQCILSKVRCLMRSDAPAQNLGSLFSIRVVGLPLACSYLSPLDSRPLCHWAVDRALHLRRPGGPPHVKLAVEWDCATKECLFGSLQEEQVPDADSVWRQQQAHQQPSCTLDECFQFYTKEEQLAQDDAWKCPHCKVLQQGMVKLSLWTLPNILIIHLKRFCQVGERRNKLSTLIKFPLSGLDMAPHVAQRSTSCKPVPGPWPSWKQPASLPTSYPVDFLYDLYAVCNHHGSLQGGHYTAYCRNSLDGQWYSYDDSTVEPIQEDEVNTRGAYILFYQKRNSIPPWSASSSMRGSTSSSLSDHWLMRLGSNSGNSTRGSLLSWSSTPCPSLARVPDSPISTNSLCHQEKGGLESRPLVRGACSRSISMKVPTASRASQGPFKTMPLRWSFGHREKRPGASVELVEYLESRRRPRRTTSQSIVPLLTGSAGGDEKSASPRSHGTLSVEDSGQANGRVPRPSGPPDHPPATGNSDVLNTTRTRKENASQDIRLPKKFDLPLTVMPSLGNEKPARPEGQKTSSWKGSQSSPPSPSVGLSRNCQDSGQGTLPKVRAAAEERASEKDRLPQSTFTLLRSVFWKKESRKPDRASGSLGSGRLSPAVDKQAPGSSPALRIPEGLARGLGGRLERDVRSAPSSIHLPRKASRFPRPSATSFSQKSVPGEQTSYGTLQRVKYHTLSLGRKKTLPESSF