Sequence details NCBI ID: XM_004857516.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Wdr16
Gene Name WD repeat domain 16, transcript variant X1
Entrez Gene ID 101722827

Database interlinks

Part of NW_004624786.1 (Scaffold)

For more information consult the page for NW_004624786.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ENSCPOG00000002115 (Guinea pig)

Gene Details

Uncharacterized protein

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000001915, Guinea pig)

Protein Percentage 93.24%
CDS Percentage 90.71%
Ka/Ks Ratio 0.09887 (Ka = 0.0326, Ks = 0.3302)

Genome Location

Sequence Coding sequence

Length: 1866 bp    Location: 11992553..12048344   Strand: +
Raw sequence   
>XM_004857516.1
ATGGATGAGAAAATTTCGCCCGAGGCCAAAGAGGTGGCAGACCTGGAACTTGACGCTGTGATTGGCTTCAATGGACATGTTCCCAATGGTCTCAAATGCCATCCTGACCAGGAGCATCTGATTTATCCTCTGGGTTGTACAATACTCATTCAGGCAATAAATACTCAAGAGCAGAATTTCCTACATGGTCATAGTAACAATGTCTCCTGTTTGACCATCTCCAAGAATGGAGATTACATTGCCTCCGGACAAGTCACATTCATGGGGTTCAAGGCAGATATCATTTTGTGGGATTATAAGGAAAGGGAGCTGATTGCTCGGCTGTCACTTCACAAGGGCAAAATTGAAGCTCTGGCCTTTTCACCAAATGATTTGTACTTGGTATCACTAGGAGGCCCAGATGATGGAAGTGTGGTGGTATGGAGCATAGCCAAGCGAGATGCTATCTGTGGCAGCCCTGCCGCTGGACTCAATGTCGGGAATGCCACCACCGTGGTCTTCTCAAGGTGCCGGGACGAGACATTTGTCACTGCTGGAAATGGGACAATTCGAGTGTGGGAACTGGATCTTCCAAATAGAAAGATCTGGCCAACTGAGTGCCAGACAGGACAGATGAAAAGAATAGTCATGAGTATTGCAATGGCTGACGATGACAGTTTTTTCTACCTTGGCACCACAACTGGAGATATTCTCAAAATGAACCCCAGGACAAAGCTGCTGGCAGACACTGGGCCTGCAAAAGACAAGTACAGTTTGGGTGTGTCGGCCATCAGATGCCTGAAGATGGGGGGTTTGTTGGTGGGCTCTGGAGCTGGATTGGTGGTCTTTTGTAAAAGCCCCAGCTACAAACCTGCCAAGAAAATTCAGTTACAAGGTGGCATCACTTCTATCACACTTCAAGGAGAAGGACACCAATTTTTTGTAGGAACAGAAGAATCACACATTTATCGCATCAGCTTCACAGAGTTCAAAGAGACTCTCATTGCGACATGTCACTTTGAAGCTGTCCAGGACATTGTCTTTCCATTTGGCACCGCTGAGCTATTTGCCACCTGTGCCAAGAAAGACATTAGGGTCTGGCACACGATGTCCAATAGAGAGCTGCTGCGGATCACTGTGCCCAACATGACCTGCCATGCCATCGATTTCATGAGGGACGGCAAGAGCATCATTTCAGCATGGAATGACGGTAAAATCCGGGCCTTCGCCCCTGAGACGGGCCGACTGATGTATGTCATTAACAGTGCTCACAGGATCGGAGTGACTGCCATCGCCACCACCAGTGACTGCAAAAGGGTCATCAGCGGTGGTGGGGAAGGGGAGGTGAGGGTGTGGCAGATAGGCTGCAAGACCCAGAAGCTGGAGGAGGCCCTGAAGGAGCACAGATCCTCTGTGTCCTGCATTCGGGTGAAGAAGAACAACGAGGAATGTGTCACAGCCAGCACAGATGGCACTTGCATCATTTGGGACCTCGTGCGTCTTAAGAGGAATCAGATGATCCTGGCCAACACCTTATTCCAATGTGTTTGTTATCACCCCGAAGAGTTCCAGATCATCACTAGTGGGGCAGACAGAAAGATTGCTTACTGGGAAGTATTTGATGGGTCAGTCATCCGAGAGTTGGAAGGTGCCTTGTCTGGGTCAGTAAATGGTATGGATATCACACAGGAGGGAGCGCACTTTGTCACAGGTGGAAACGACCATCTGGTCAAAGTTTGGGATTACAACGAGGGTGAAGTGACTCATGTTGGGATGGGACATAGTGGCAATATCACTCGTGTCCGGATAAGTCCCGGAAATAAGTACATCATTAGCGTAAGTGCTGATGGGGCCATTCTTCGATGGAAGTACCCCTATGCCTCTTGA

Related Sequences

XP_004857573.1 Protein

Wdr16 PREDICTED: WD repeat-containing protein 16 isoform X1 [Heterocephalus glaber]

Length: 621 aa      
>XP_004857573.1
MDEKISPEAKEVADLELDAVIGFNGHVPNGLKCHPDQEHLIYPLGCTILIQAINTQEQNFLHGHSNNVSCLTISKNGDYIASGQVTFMGFKADIILWDYKERELIARLSLHKGKIEALAFSPNDLYLVSLGGPDDGSVVVWSIAKRDAICGSPAAGLNVGNATTVVFSRCRDETFVTAGNGTIRVWELDLPNRKIWPTECQTGQMKRIVMSIAMADDDSFFYLGTTTGDILKMNPRTKLLADTGPAKDKYSLGVSAIRCLKMGGLLVGSGAGLVVFCKSPSYKPAKKIQLQGGITSITLQGEGHQFFVGTEESHIYRISFTEFKETLIATCHFEAVQDIVFPFGTAELFATCAKKDIRVWHTMSNRELLRITVPNMTCHAIDFMRDGKSIISAWNDGKIRAFAPETGRLMYVINSAHRIGVTAIATTSDCKRVISGGGEGEVRVWQIGCKTQKLEEALKEHRSSVSCIRVKKNNEECVTASTDGTCIIWDLVRLKRNQMILANTLFQCVCYHPEEFQIITSGADRKIAYWEVFDGSVIRELEGALSGSVNGMDITQEGAHFVTGGNDHLVKVWDYNEGEVTHVGMGHSGNITRVRISPGNKYIISVSADGAILRWKYPYAS