Details from NCBI annotation

Gene Symbol Ntn1
Gene Name netrin 1
Entrez Gene ID 101722127

Database interlinks

Part of NW_004624786.1 (Scaffold)

For more information consult the page for NW_004624786.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

NTN1 ENSCPOG00000013697 (Guinea pig)

Gene Details

netrin 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000012335, Guinea pig)

Protein Percentage 99.61%
CDS Percentage 95.01%
Ka/Ks Ratio 0.00317 (Ka = 0.0015, Ks = 0.4814)

NTN1 ENSG00000065320 (Human)

Gene Details

netrin 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000173229, Human)

Protein Percentage 99.01%
CDS Percentage 93.93%
Ka/Ks Ratio 0.00567 (Ka = 0.0038, Ks = 0.6756)

Ntn1 ENSMUSG00000020902 (Mouse)

Gene Details

netrin 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000104314, Mouse)

Protein Percentage 98.51%
CDS Percentage 90.78%
Ka/Ks Ratio 0.00604 (Ka = 0.006, Ks = 0.9931)

Ntn1 ENSRNOG00000003947 (Rat)

Gene Details

netrin 1 (Ntn1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000005255, Rat)

Protein Percentage 98.34%
CDS Percentage 90.78%
Ka/Ks Ratio 0.00779 (Ka = 0.0067, Ks = 0.8641)

Genome Location

Sequence Coding sequence

Length: 1815 bp    Location: 11526050..11703340   Strand: +
>XM_004857514.1
ATGATGCGCGCAGTGTGGGAGGCGTTGGCAGCGCTGGTCGCGCTGGCGTGCCTGGTGGGCGCGGTGCGCGGCGGTCCCGGGCTCAGCATGTTTGCGGGCCAGGCGGCGCAGCCGGACCCCTGCTCGGACGAGAACGGCCACCCACGCCGCTGCATCCCGGATTTTGTCAATGCGGCCTTCGGCAAGGACGTGCGCGTCTCCAGCACCTGTGGCCGGCCCCCGGCGCGTTACTGTGTGGTGAGCGAGCGCGGCGAGGAGCGGCTGCGCTCGTGCCACCTCTGCAACGCGTCGGACCCCAAGAAGGCTCACCCACCAGCCTTCCTCACCGACCTCAACAATCCACACAACCTGACGTGCTGGCAGTCGGAGAACTTCCTGCAGTTCCCGCACAACGTCACGCTCACACTGTCACTCGGGAAGAAGTTCGAGGTGACCTACGTGAGTCTGCAGTTCTGCTCGCCACGGCCCGAGTCCATGGCCATCTACAAGTCCATGGACTACGGGCGCACGTGGGTGCCCTTTCAGTTCTACTCCACGCAGTGCCGCAAGATGTACAACCGGCCGCACCGCGCGCTCGTCACCAAGCAGAACGAGCAGGAGGCCGTGTGCACCGACTCGCACACCGACATGCGCCCGCTCTCTGGCGGCCTCATCGCCTTCAGCACTCTGGATGGGCGGCCCTCGGCACACGACTTCGACAACTCTCCGGTGCTGCAGGACTGGGTCACAGCCACCGACATCCGTGTGGCCTTCAGCCGCCTGCACACGTTTGGCGACGAGAACGAAGACGACTCGGAGCTGGCGCGCGACTCGTACTTCTATGCTGTGTCCGATTTGCAGGTGGGCGGCCGCTGCAAGTGCAATGGCCACGCGGCCCGTTGCGTGCGCGATCGCGACGACAGCCTGGTGTGCGACTGCAGGCACAACACGGCGGGCCCGGAATGCGATCGCTGCAAACCGTTTCACTACGACCGACCCTGGCAGCGCGCCACGGCCCGCGAGGCCAACGAGTGCGTGGCCTGTAACTGCAACCTGCATGCCCGGCGCTGTCGCTTCAACATGGAACTCTACAAGCTGTCGGGTCGCAAGAGCGGGGGTGTCTGCCTCAACTGCCGCCACAACACAGCTGGTCGCCACTGCCATTACTGCAAGGAGGGTTTCTACCGAGACATGGGCAAGCCCATCACCCACCGGAAGGCCTGCAAAGCCTGTGATTGCCACCCTGTTGGTGCTGCTGGCAAGACCTGCAACCAGACCACCGGCCAGTGTCCCTGCAAGGATGGAGTGACAGGCATCACCTGCAACCGCTGCGCCAAGGGCTACCAGCAGAGTCGCTCACCCATCGCGCCCTGCATCAAGATCCCTGTAGCACCACCAACCACTGCAGCTAGCAGCGTGGAGGAGCCGGAAGACTGCGATTCCTACTGCAAGGCCTCCAAAGGGAAGCTGAAGATTAACATGAAAAAGTACTGCAAGAAGGACTATGCCGTCCAGATCCACATCCTGAAGGCAGACAAGGCAGGGGACTGGTGGAAGTTCACAGTCAACATCATCTCCGTGTACAAGCAGGGCACGAGCCGCATCCGCCGCGGTGACCAGAGCTTGTGGATCCGCTCCCGTGATATCGCCTGCAAGTGCCCCAAAATCAAGCCCCTCAAGAAGTACCTGCTGCTGGGCAACGCTGAGGACTCGCCTGACCAGAGCGGCATCGTGGCAGACAAGAGCAGCCTGGTGATCCAGTGGCGGGACACGTGGGCACGGCGGCTGCGCAAATTCCAGCAGCGGGAGAAAAAGGGCAAGTGCAAGAAGGCCTAG

Related Sequences

XP_004857571.1 Protein

Ntn1 PREDICTED: netrin-1 [Heterocephalus glaber]

Length: 604 aa      View alignments
>XP_004857571.1
MMRAVWEALAALVALACLVGAVRGGPGLSMFAGQAAQPDPCSDENGHPRRCIPDFVNAAFGKDVRVSSTCGRPPARYCVVSERGEERLRSCHLCNASDPKKAHPPAFLTDLNNPHNLTCWQSENFLQFPHNVTLTLSLGKKFEVTYVSLQFCSPRPESMAIYKSMDYGRTWVPFQFYSTQCRKMYNRPHRALVTKQNEQEAVCTDSHTDMRPLSGGLIAFSTLDGRPSAHDFDNSPVLQDWVTATDIRVAFSRLHTFGDENEDDSELARDSYFYAVSDLQVGGRCKCNGHAARCVRDRDDSLVCDCRHNTAGPECDRCKPFHYDRPWQRATAREANECVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFYRDMGKPITHRKACKACDCHPVGAAGKTCNQTTGQCPCKDGVTGITCNRCAKGYQQSRSPIAPCIKIPVAPPTTAASSVEEPEDCDSYCKASKGKLKINMKKYCKKDYAVQIHILKADKAGDWWKFTVNIISVYKQGTSRIRRGDQSLWIRSRDIACKCPKIKPLKKYLLLGNAEDSPDQSGIVADKSSLVIQWRDTWARRLRKFQQREKKGKCKKA