Sequence details NCBI ID: XM_004857494.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Arhgef15
Gene Name Rho guanine nucleotide exchange factor (GEF) 15, transcript variant X2
Entrez Gene ID 101715980

Database interlinks

Part of NW_004624786.1 (Scaffold)

For more information consult the page for NW_004624786.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ARHGEF15 ENSCPOG00000010445 (Guinea pig)

Gene Details

Rho guanine nucleotide exchange factor (GEF) 15

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000009381, Guinea pig)

Protein Percentage 92.59%
CDS Percentage 91.08%
Ka/Ks Ratio 0.1544 (Ka = 0.0404, Ks = 0.2619)

ARHGEF15 ENSG00000198844 (Human)

Gene Details

Rho guanine nucleotide exchange factor (GEF) 15

External Links

Gene Match (Ensembl Protein ID: ENSP00000355026, Human)

Protein Percentage 88.19%
CDS Percentage 87.15%
Ka/Ks Ratio 0.18085 (Ka = 0.0681, Ks = 0.3763)

Arhgef15 ENSMUSG00000052921 (Mouse)

Gene Details

Rho guanine nucleotide exchange factor (GEF) 15

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000104311, Mouse)

Protein Percentage 87.1%
CDS Percentage 84.23%
Ka/Ks Ratio 0.15611 (Ka = 0.0818, Ks = 0.5241)

Arhgef15 ENSRNOG00000004566 (Rat)

Gene Details

Rho guanine nucleotide exchange factor (GEF) 15 (Arhgef15), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000060721, Rat)

Protein Percentage 81.0%
CDS Percentage 78.67%
Ka/Ks Ratio 0.1927 (Ka = 0.1382, Ks = 0.7174)

Genome Location

Sequence Coding sequence

Length: 2529 bp    Location: 10890204..10902948   Strand: +
Raw sequence   
>XM_004857494.1
ATGTCAGCCCAGTCCCTTCCTGCAGCAACACCCCCCACCCAGAAACCCTCTCGGATCATCCGCCCTCGGCCCCCTTCCCGCCCACGGGCTCCCCACTCCCCAGGGCCTCCTCACCATGGCTCTTCTCCACAGGCACTTCCCCAAACTTCCAGTGATGCATCAGCTCCAATGTGCACCCCCATTTTCTGGGAGCCCCCAGCCACATCCCTCAAGCCCCCTGCCCTTTTGCCTCTATCGGCTTCTAGAACCAGCCTCGACTCCCAGCCTTCCCCAGACTCATGTTCCAGCACCCCCAGTCCAGTGTCCAGGCGCTCTGGCTCCCCAGAACTGGCTGTCTGTTCTCCAGTTCCCCCACCCAAGCCCTCTGGGTCACCTCGCACACCTCTGCCCCTGCTCCCCATGGCTGGGGGCCTGAAGCAGGATGGTCTGGCCTCGGCCCCTGGCACTGTGCGGAGACTGGCAGGCAGGTTTGAATGGGGGGCTGAAGACAGGACCCAGGCTGCAGACTCTCTGGAGTGGGGTCCCCAAGGGGGAGCGGATGTGAATGGGGAGAGAAAGGATGCTGCTGGGAACCGGTCCCAGGAGAATGGTGCTCTGGATGCTATCCTGGCCTGCCCTCCTTGCTGCCCTTGTGTCTGCCACATAACCCGGCCTGGGCTGGAGCTCCGATGGGTGCCTGTGGGGGGCCCTGAGGGTGGCCTCAGAGCCCCCTGCAGGGCCTCTCCACTGCGCACCTCCCGCTCCCGCCCTAACCCTCCGAGCATCAGTCGCCCTGCAGTCGTCCTCACGTCCTATCGTTCCACCGCTGAGCGAAAACTTCTGCCACCCCTTAAACCTCCCAAGCCAACTCGGGTCAGACAGGATGCCACTGTCTCTGGGGACCCCCCCCAGCCAGATCTTGATTTGCCTTCTGAAGATGGAATCCAAACAGGGGACAGCCCTGATGATGCTCCTCTGAACCAGAACCCCTTCCCTGCAGCCATGGAGGGAAGGAATGAGGAGGGGCTGGAGGGGCTGAAGGAGCAGAACTGGGAGCTGCCCCTGCAGGACGAACCTTTATACCAGACCTACCGAGCAGCCGTGCTGTCAGAGGAGCTGTGGGGGGTTAGTGAGGACGGGGGCCCCTCTCCAGCAAATCCTGGGGAAGCTCCTGCCTTCACGCGACCTCCTGGGCCTCGAAACACCCTGTGGCAGGAGCTTCCAGCTGTGCGAGTCAGCGGCCTCCTGGAGACCCTCAGCCCCCAGGAGAGGCGCATGCAAGAGAGCCTGTTCGAGGTGGTGACGTCTGAGGCCTCCTACCTGCGCTCCCTGAGGCTGCTCACTGACACTTTCGTGCTGAGCCAGGCACTCCGGGACACGCTTACCCCGAGGGATCACCACACACTCTTCTCCAATGTGCAGCGAGTCCAGGGAGTCAGTGAGCGGTTTCTAGGAACGTTACTGTCCCGGGTGCGTTCTTCTCCTCACATCAGTGACCTGTGCGATGTGGTGCATGTGCATGCGGTGGGGCCTTTCTCCGTGTACGTGGATTATGTGCGGAACCAGCAGTATCAGGAGGAGACCTACAGCCGCCTTATGGACACAAACATGCGTTTCTCCGCGGAGCTTCGGCGGCTGCAGAGCCTCCCCAAGTGTGAGCGGCTCCCGCTACCCTCCTTCCTGCTGCTGCCCTTCCAGCGTATCACCCGGCTCCGCATGCTGCTGCAGAATATCCTGCGCCAGACCGAGGAGGGATCCAGTCGCCAGGAAAATGCCCAGAAGGCCCTGGGTGCTGTCAGTAAGATCATTGAGCGTTGCAGCGCTGAGGTAGGGCGCATGAAGCAGACCGAAGAGCTGATTCGACTCACCCAAAGGCTGCGCTTCCACAAAGTCAAGGCTCTGCCACTGGTCTCCTGGTCGAGGCGCCTGGAGTTGCAGGGGGAGCTGACCGAGTTAGGGTGCCGGAGGGGGGGCGTGCTCTTCACCTCGCGACCCCGCTTTACTCCCCTCTGCCTGCTGCTCTTTAGTGATCTCCTGCTCATCACTCAGCCCAAGAGTGGGCAGCGGCTGCAGGTTCTGGACTATGCCCATCGCTCCCTGGTGCAGGCCCAGCAGGTTCCAGACCCATCTGGACCCCCTACCTTCCGCCTCTCCCTTCTCAGCAACCACCAGGGGCGCCCCACCCACCGGCTGCTCCAAGCTTCCTCCCTATCAGACATGCAGCGCTGGCTGGGAGCCTTCCCTACTCCAGGTCCCCTTCCCTGCTCCCCAGACACCATCTATGAGGACTGTGAGTGTTCCCAGGAACTGTACTCAGAGCCATCTACACCTGTCAAGGCTGAGGGACCAGGTGTGGAGTCCAGGGCTCCCACCAAGCATCTGCACAAGAATCCTGAAGGCTGGCTGAAGGGGCTTCCTGGAGCCTTTCCTGCTCAGTTGGTGTGTGAAGTCACAGGGGAACATGAACGGCGGAAGCACCTTCGTCGGCACCAGAGGCTTCTTGAGGCTATGGGGCCCTCTTCAGGCACCCCCGGTGACCCTTCACCCTAA

Related Sequences

XP_004857551.1 Protein

Arhgef15 PREDICTED: rho guanine nucleotide exchange factor 15 isoform X2 [Heterocephalus glaber]

Length: 842 aa      View alignments
>XP_004857551.1
MSAQSLPAATPPTQKPSRIIRPRPPSRPRAPHSPGPPHHGSSPQALPQTSSDASAPMCTPIFWEPPATSLKPPALLPLSASRTSLDSQPSPDSCSSTPSPVSRRSGSPELAVCSPVPPPKPSGSPRTPLPLLPMAGGLKQDGLASAPGTVRRLAGRFEWGAEDRTQAADSLEWGPQGGADVNGERKDAAGNRSQENGALDAILACPPCCPCVCHITRPGLELRWVPVGGPEGGLRAPCRASPLRTSRSRPNPPSISRPAVVLTSYRSTAERKLLPPLKPPKPTRVRQDATVSGDPPQPDLDLPSEDGIQTGDSPDDAPLNQNPFPAAMEGRNEEGLEGLKEQNWELPLQDEPLYQTYRAAVLSEELWGVSEDGGPSPANPGEAPAFTRPPGPRNTLWQELPAVRVSGLLETLSPQERRMQESLFEVVTSEASYLRSLRLLTDTFVLSQALRDTLTPRDHHTLFSNVQRVQGVSERFLGTLLSRVRSSPHISDLCDVVHVHAVGPFSVYVDYVRNQQYQEETYSRLMDTNMRFSAELRRLQSLPKCERLPLPSFLLLPFQRITRLRMLLQNILRQTEEGSSRQENAQKALGAVSKIIERCSAEVGRMKQTEELIRLTQRLRFHKVKALPLVSWSRRLELQGELTELGCRRGGVLFTSRPRFTPLCLLLFSDLLLITQPKSGQRLQVLDYAHRSLVQAQQVPDPSGPPTFRLSLLSNHQGRPTHRLLQASSLSDMQRWLGAFPTPGPLPCSPDTIYEDCECSQELYSEPSTPVKAEGPGVESRAPTKHLHKNPEGWLKGLPGAFPAQLVCEVTGEHERRKHLRRHQRLLEAMGPSSGTPGDPSP