Details from NCBI annotation

Gene Symbol Per1
Gene Name period circadian clock 1, transcript variant X4
Entrez Gene ID 101710492

Database interlinks

Part of NW_004624786.1 (Scaffold)

For more information consult the page for NW_004624786.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PER1 ENSCPOG00000013328 (Guinea pig)

Gene Details

period circadian clock 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000011999, Guinea pig)

Protein Percentage 94.34%
CDS Percentage 92.59%
Ka/Ks Ratio 0.12395 (Ka = 0.0283, Ks = 0.2283)

PER1 ENSG00000179094 (Human)

Gene Details

period circadian clock 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000314420, Human)

Protein Percentage 92.75%
CDS Percentage 89.76%
Ka/Ks Ratio 0.10611 (Ka = 0.0378, Ks = 0.3567)

Per1 ENSMUSG00000020893 (Mouse)

Gene Details

period circadian clock 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000021271, Mouse)

Protein Percentage 92.81%
CDS Percentage 88.38%
Ka/Ks Ratio 0.09683 (Ka = 0.0404, Ks = 0.417)

Per1 ENSRNOG00000007387 (Rat)

Gene Details

period circadian clock 1 (Per1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000053964, Rat)

Protein Percentage 93.11%
CDS Percentage 87.95%
Ka/Ks Ratio 0.08595 (Ka = 0.0385, Ks = 0.448)

Genome Location

Sequence Coding sequence

Length: 3852 bp    Location: 10722019..10706495   Strand: -
>XM_004857480.1
ATGAGTGGCCCCTTGGAAGGGGCTGATGGGGGAGGGGACCCTAGGCCAGGAGAATCCTTTTGTCCTAGAGAAGTCCCATCCCCTGGCCCCCCGCAACACCGGCCTTGCCCAGGCCCCAGCCTGGCTGATGACACCGATGCCAATAGCAATGGCTCAAGTGGCAATGAGTCCAATGGGAATGAGTCCAGGGGTGCATCCCAGCGGAGCTCACATAGCTCCTCCTCTGGCAATGGCAAGGACTCCGCCCTGTTGGAGACCACTGAGAGCAGCAAGAGCACAAACTCTCAGAGCCTATCCCCACCCAGCAGTTCCATTGCCTACAGCCTCCTGAGTGCCAGCTCAGAGCATGACAACCCATCTACCAGTGGCTGCAGCAGTGAACAATCAGCCCGGGCGAGGACTCAGAAGGAACTCATGACAGCACTTAGGGAGCTCAAGCTTCGACTGCCACCAGAACGTAGAGGCAAGGGCCGTTCTGGTACCCTCGCCACACTACAGTATGCACTGGCCTGTGTCAAGCAGGTGCAAGCCAACCAAGATTACTACCAGCAGTGGAGCCTGGAGGAAGGCGAGCCTTGTGCCATGGATATGTCCACCTATACCCTGGAGGAGCTGGAGCACATCACATCTGAGTACACGCTTCGAAACCAGGATACCTTCTCCGTGGCTGTCTCCTTCCTGACAGGCCGAATTGTCTACATTTCGGAGCAGGCAGGTGTCCTGCTACGGTGCAAGCGGGATGTGTTCCGGGGTGCCCGCTTCTCAGAGCTCCTGGCTCCCCAGGATGTGGGTGTTTTCTATGGCTCTACTGCTCCATCTCGTCTGCCCACATGGGGCACTGGGGCCTCTGCAGGTTCAGGCCTCAAGGACTTTACTCAAGAGAAGTCTGTCTTCTGCCGTATCAGAGGAGGTCCTGACCGGGATCCAGGGCCTCGGTACCAGCCATTCCGGCTAACCCCATATGTGACCAAGATCCGAGTCTCAGATGGGGCCCCCGCACAGCCATGCTGCTTGCTCATTGCAGAGCGCATCCACTCGGGTTATGAAGCTCCCCGGATCCCCCCTGACAAGAGAATCTTCACCACTCGGCACACACCCAGCTGCCTATTCCAGGATGTGGATGAAAGGGCTGCTCCACTGCTGGGCTACCTACCCCAGGACCTCCTGGGGGCCCCAGTGCTCCTCTTTCTGCATCCCGAGGACCGGCCTCTCATGCTGGCCATCCACAAGAAGATCCTGCAGCTGGCCGGCCAGCCCTTTGACCACTCCCCTATCCGCTTTTGTGCCCGCAATGGGGAGTATGTCACCATGGACACCAGCTGGGCTGGCTTCGTACATCCCTGGAGTCGCAAGGTGGCCTTTGTGTTGGGCCGCCACAAAGTACGCACGGCACCCTTGAATGAGGACGTGTTCACTCCGCCAGCCCCCAGCCCAGCTCTGTCCCTAGACTCTGATATACAGGAGCTCTCAGAGCAGATCCACCGGCTGCTGTTGCAGCCTGTGCACAGCTCCAGCCCCCCTGGGCTTTGTGGAGTTGGCCCTGTGGCATCCCCAGGTCCTCTTCATAGCCCTGGCTCCTCCAGTGATAGCAATGGGGGTGATGCTGAGGGGCCTGGGCCTCCTGCTCCAGTGACTTTCCAGCAGATCTGTAAGGATGTGCATCTGGTGAAACACCAGGGACAGCAGCTTTTCATTGAGTCCCGGGCCCGGCCTCCACCCCGGCCTCGCCTCCCTGCCACAGGAACATTCAAGGCCAAGGCCCTTCCCTCACAGTCCCGAAACCCAGAGCTGGAGGCTGTCCCTGCTCCCATCCAATCCCCATTATCCTTGGCCCCTGAGGAGGCTGAGAGGAAAGAAACCTCCAGCTGTTCCTACCAGCAGATCAACTGCCTGGACAGCATCCTCAGGTACCTGGAGAGCTGCAACATCCCCAGCACGACCAAGCGAAAATGTGCCTCCTCTTCCTCCTGTACTGCCTCCTCAGCCTCTGATGATGACAAGCAAAGGACAGGTCCAGTCCCTGTGGGGGCCAAGAAAGATCCACCGTCGGCATTGCTGTCTGGGGAGGGGGCCACTCCTCGGAAGGAGCCAGTGGTGGGAGGCACCCTGAGCCCGCTCGGCCTGGCCAATAAGGCAGAGAGTGTGGTGTCTGTCACCAGTCAGTGTAGCTTCAGCTCGACCATCGTCCATGTGGGAGACAAGAAGCCCCCGGAGTCGGACATCATCATGATGGAGGACCTGCCTGGTTTAGCTCTGGGCCCAGCCCTCAGCCCGGCCCCCAGCCCCACAGTAGCTCCTGACCCAGCCCCAGATGCCTACCGCCCAGTGGGCCTGACCAAGGCCGTGCTGTCCCTGCACACACAGAAGGAAGAGCAAGCCTTCCTCAGCCGCTTCCGAGACCTTGGCCGGCTACGTGGACTTGACGGCTCTTCCACAGCCCCCTCGGCCCCTGGGGAACGAGGCTGCCACCATGGCCCCACGCCCCCCAGCCGCCGACACCACTGCCGATCCAAAGCCAAGCGCTCACGCCGCCATCAGACCTCCCGTGCTGAAGCCCCCTGCTATGTCCCCCACCCCTCACCTGTACCGCCCTCTGGCCCCTGGCCACCCCCACCAGCCACTACCCCCTTTCCAGCAGTGGTCCAGCCCTACCCCGTCCCAGTGTTCTCCCCCCGAGGAGGTCCCCAGCCTCTTCCCACTGCCCCCACCTCTGTGCCCCCTGCCACCTTCTCTACCCCCCTGGTAACCCCAGTGGTGGCCTTGGTGCTACCTAACTATCTGTTCCCCACCCCATCCAGCTATCCCTATGGGGTACACCAGGCCCCTGCTGAGGGGCCCCCTACCCCTGCCTCCCACTCGCCTTCACCGTCCCTGCTGCCACTGCCCCCTAGCCCCCCGCACCACCCGGACTCCCCACTGTTCAACTCAAGATGCAGCTCTCCACTCCAGCTTAATCTGCTGCAGCTGGAGGAACCCTCCCGCACTGAGGGGGGTGCTGTTGCAGGGGGCCCTGGGAGCAGTGCTGGGCCCCCCCCACCTTCTGCAGAGGAGGCTGCGGAGCCAGAGACCAGACTGGTGGAGGTAAATGAGTCCTCTAATCAGGATGCGCTGTCTGGCTCCAGTGACCTGCTGGAGCTGCTGCTCCAAGAGGACTCTCGCTCTGGCACAGGCTCTGCAGCTTCAGGCTCCCTGGGCTCTGGCTTGGGCTCCGGGTCTGGCTCAGGCTCCCATGAGGGTGGCAGCACCTCAGCCAGCATTACTCGCAGCAGTCAGAGCAGCCACACAAGCAAGTACTTCGGCAGCATTGACTCTTCAGAGGCTGAGGCTGGGGCTGCTCAGGCCCAGGCTGAGCCAGGGGACCAGGTCATTAAGTATGTGCTCCAGGATCCCATCTGGCTGCTCATGGCCAATGCTGACCAGCATGTCATGATGACCTACCAGGTGCCCTCCAGGGACATGGCTTCAGTGCTGAAGCAGGACCGGGAGCGGCTCCGGGCCATGCAGAAGCAGCAGCCTCGGTTCTCAGAGGACCAGCGGCGGGAACTGGGTGCTGTGCACTCCTGGGTCCGGAAGGGCCAGCTCCCTCAGGCCCTTGATGTGATGGCCTGTGTGGACTGTGGTAGCAGCACCCAAGACCCTGGCCACTCTGATCATCCACTCTTCTCAGAGCTGGACGGACTGGGGCTGGAGCCCATGGAGGAGGGTGGAGGCGAGGGTGAGGGTGGTGAGGAGCCTGGGGCCCAAGCTGAGGCCAAGGTCTCAGGCTCTCAGGACTCAGCCATGGAGGAGGAAGAACAAGGTGGGAGCTCATCCAGTCCAACCTTACCAACTGCAGAAAATGGCACCAGCTAG

Related Sequences

XP_004857537.1 Protein

Per1 PREDICTED: period circadian protein homolog 1 isoform X4 [Heterocephalus glaber]

Length: 1283 aa      View alignments
>XP_004857537.1
MSGPLEGADGGGDPRPGESFCPREVPSPGPPQHRPCPGPSLADDTDANSNGSSGNESNGNESRGASQRSSHSSSSGNGKDSALLETTESSKSTNSQSLSPPSSSIAYSLLSASSEHDNPSTSGCSSEQSARARTQKELMTALRELKLRLPPERRGKGRSGTLATLQYALACVKQVQANQDYYQQWSLEEGEPCAMDMSTYTLEELEHITSEYTLRNQDTFSVAVSFLTGRIVYISEQAGVLLRCKRDVFRGARFSELLAPQDVGVFYGSTAPSRLPTWGTGASAGSGLKDFTQEKSVFCRIRGGPDRDPGPRYQPFRLTPYVTKIRVSDGAPAQPCCLLIAERIHSGYEAPRIPPDKRIFTTRHTPSCLFQDVDERAAPLLGYLPQDLLGAPVLLFLHPEDRPLMLAIHKKILQLAGQPFDHSPIRFCARNGEYVTMDTSWAGFVHPWSRKVAFVLGRHKVRTAPLNEDVFTPPAPSPALSLDSDIQELSEQIHRLLLQPVHSSSPPGLCGVGPVASPGPLHSPGSSSDSNGGDAEGPGPPAPVTFQQICKDVHLVKHQGQQLFIESRARPPPRPRLPATGTFKAKALPSQSRNPELEAVPAPIQSPLSLAPEEAERKETSSCSYQQINCLDSILRYLESCNIPSTTKRKCASSSSCTASSASDDDKQRTGPVPVGAKKDPPSALLSGEGATPRKEPVVGGTLSPLGLANKAESVVSVTSQCSFSSTIVHVGDKKPPESDIIMMEDLPGLALGPALSPAPSPTVAPDPAPDAYRPVGLTKAVLSLHTQKEEQAFLSRFRDLGRLRGLDGSSTAPSAPGERGCHHGPTPPSRRHHCRSKAKRSRRHQTSRAEAPCYVPHPSPVPPSGPWPPPPATTPFPAVVQPYPVPVFSPRGGPQPLPTAPTSVPPATFSTPLVTPVVALVLPNYLFPTPSSYPYGVHQAPAEGPPTPASHSPSPSLLPLPPSPPHHPDSPLFNSRCSSPLQLNLLQLEEPSRTEGGAVAGGPGSSAGPPPPSAEEAAEPETRLVEVNESSNQDALSGSSDLLELLLQEDSRSGTGSAASGSLGSGLGSGSGSGSHEGGSTSASITRSSQSSHTSKYFGSIDSSEAEAGAAQAQAEPGDQVIKYVLQDPIWLLMANADQHVMMTYQVPSRDMASVLKQDRERLRAMQKQQPRFSEDQRRELGAVHSWVRKGQLPQALDVMACVDCGSSTQDPGHSDHPLFSELDGLGLEPMEEGGGEGEGGEEPGAQAEAKVSGSQDSAMEEEEQGGSSSSPTLPTAENGTS