Details from NCBI annotation

Gene Symbol Alox12b
Gene Name arachidonate 12-lipoxygenase, 12R type, transcript variant X1
Entrez Gene ID 101708945

Database interlinks

Part of NW_004624786.1 (Scaffold)

For more information consult the page for NW_004624786.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ALOX12B ENSCPOG00000012894 (Guinea pig)

Gene Details

arachidonate 12-lipoxygenase, 12R type

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000011607, Guinea pig)

Protein Percentage 94.0%
CDS Percentage 91.43%
Ka/Ks Ratio 0.06414 (Ka = 0.027, Ks = 0.4205)

ALOX12B ENSG00000179477 (Human)

Gene Details

arachidonate 12-lipoxygenase, 12R type

External Links

Gene Match (Ensembl Protein ID: ENSP00000315167, Human)

Protein Percentage 85.88%
CDS Percentage 86.12%
Ka/Ks Ratio 0.10846 (Ka = 0.0707, Ks = 0.6522)

Alox12b ENSMUSG00000032807 (Mouse)

Gene Details

arachidonate 12-lipoxygenase, 12R type

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000035250, Mouse)

Protein Percentage 85.31%
CDS Percentage 84.4%
Ka/Ks Ratio 0.11499 (Ka = 0.0792, Ks = 0.689)

Alox12b ENSRNOG00000022210 (Rat)

Gene Details

arachidonate 12-lipoxygenase, 12R type (Alox12b), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000033009, Rat)

Protein Percentage 86.88%
CDS Percentage 84.69%
Ka/Ks Ratio 0.0983 (Ka = 0.0715, Ks = 0.727)

Genome Location

Sequence Coding sequence

Length: 2106 bp    Location: 10659310..10647451   Strand: -
>XM_004857472.1
ATGGCCACCTACAAAGTCAGGGTGGCCACAGGCACCGATGTCTTGTCAGGGACGCTGGACTGCATCTCACTGACCATCGTGGGGACCCAAGGAGAGAGCCACAAGCAGCGGCTAAACCACTTTGGCAGAGACTTCGCCGCGGGGGCGGTGGATGACTACACTGTCCAGTGCCAGCAGGACCTGGGGGAGCTCATCATCATCCGCCTGTACAAGGAGCGCTCCTCCTTCTTCCCCAAGGACCCCTGGTACTGCAACTACGTGCAGATCTGTGCCCCCAATGGTCGCATCTACCACTTCCCTGCCTACCAGTGGATGGACGGCTATGAGACCCTGGCACTCCGAGAGGCTACAGGAAAGACAACAGCAGATGATTCACTTTCCATCCTTCTGCAACACAGACAAGAGGAAATCAGAACCAAGCAGGACTTCTACCACTGGAGGGTCTTCGTTCCTGGCCTCCCCAACTATGTGCACATCCCCAGTTACCACCCTCCTGTCCGGCGGTGCCGCAACCCCAACCGGCCTGAGTGGAATGGCTATGTTCCAGGATTTCCAATTCTCATCAACGTCAAGGCCACTAAGTTTCTAAATTTAAATCTCCGTTTCTCTTTCCTCAAGACAGCCTCCTTCTTCTTACGCCTGGCGCCCATGTCTCTGGCACTCAAAATCCGTGGCCTGCTGGACTGCAAACGTTCGTGGAAGAGACTAAAGGACATCGGGAACATTTTCCCTGCCACCAAGACTGTTGTTTCTGAGTATGTGGCTGACCACTGGATGGAGGACACCTTCTTCGGGTACCAGTATCTCAATGGCATAAACCCAAATGTGATCCGCCGCTGCACATGTATCCCAGACAAATTCCCTGTCACAGATGACATGGTGGCCCCATTCCTGGGAGAGGGAACGTGCTTGCAAGCGGAGCTGGAGAAGGGGAACATTTACCTGGCAGACTATCGCATCTTGGAGGGCATCCCCACCGTGGAGCTCAATGGCCAGAAGCAGTTTCACTGTGCGCCTATCTGCCTGCTGCACCTTAATTCCCAGGGCAACGTGATGCCCATCGCCATCCAGCTTAGCCAGACCCCTGGGCCTGACTGCCCCATCTTCCTGCCCAGTGATTGTGAGTGGGACTGGCTGCAGGCCAAGACGTGGGTGCGCTATGCCGAGTTCTACTGTCACGAGGCCATCGCGCACCTGCTGGAGACCCACCTCATCGGCGAAGCCTTTAGCCTGGCCATGCTGAGGCACCTACCCATGTGCCACCCTCTGTACAAGCTCCTCATCCCCCACACCCGCTTCACTGTCCAGATCAACAGCATCGGGCGGGCCCTTCTCCTTAACGAGGGTGGGCTCTCTGCCAGGGCCATGAGCCTAGGCCTGAAGGGCTTTGCTGAGGTGATGGTGCGGGCTCTGTCTGAGCTCACCTACGACAACCTCTGTGTCCCCAATGACTTCATGGAGCGTGGGGTCCAGGACCTCCCTGGGTACTATTTCCGCGATGACAGCTTGGCAGTGTGGGATGCAATGGAGAGGTATGTGACGGACATCATCACCTATTATTACCCAAGTGATGCAGCTGTGGAGGGTGACCCGGAATTGCAGTGCTGGGTGCAGGAAATATTCAAGGAGTGTTTGCTAGAGCGGCAGAGCTCAGGCTTCCCCACGTGCTTGCGAACAGTGCCTGAGCTGATCCGATATGTCACCACCATCATATATACCTGCTCTGCCAGGCATGCAGGTGTCAACTCAGGCCAGCTGGAGTTCACCTCCTGGATGCCCAACTTCCCCCCCTCCATGCGGAGACCGCCGTTGGAGGCCAAGGGGCTCAGCACTCAGCAGACCTTCATGGATACGCTGCCTGACGTGAAGACCACATGCATCGTGCTCTTGGTGCTCTGGACACTCAGTCGAGAGCCCGATGACAAGCGGCCCCTTGGCCACTTCCCCGACATCCACTTCGTGGAGGATGCGCCGCGCAGGAGCATGGAGGCCTTCCGCCACAGGCTGAACCAGATCTCGCACGACATCCGTCAGCGCAACAAGTGCCTCCCCATTCCATATAACTACCTGGACCCTGTACTGATCGAGAACAGCATTTCTATCTAA

Related Sequences

XP_004857529.1 Protein

Alox12b PREDICTED: arachidonate 12-lipoxygenase, 12R-type isoform X1 [Heterocephalus glaber]

Length: 701 aa      View alignments
>XP_004857529.1
MATYKVRVATGTDVLSGTLDCISLTIVGTQGESHKQRLNHFGRDFAAGAVDDYTVQCQQDLGELIIIRLYKERSSFFPKDPWYCNYVQICAPNGRIYHFPAYQWMDGYETLALREATGKTTADDSLSILLQHRQEEIRTKQDFYHWRVFVPGLPNYVHIPSYHPPVRRCRNPNRPEWNGYVPGFPILINVKATKFLNLNLRFSFLKTASFFLRLAPMSLALKIRGLLDCKRSWKRLKDIGNIFPATKTVVSEYVADHWMEDTFFGYQYLNGINPNVIRRCTCIPDKFPVTDDMVAPFLGEGTCLQAELEKGNIYLADYRILEGIPTVELNGQKQFHCAPICLLHLNSQGNVMPIAIQLSQTPGPDCPIFLPSDCEWDWLQAKTWVRYAEFYCHEAIAHLLETHLIGEAFSLAMLRHLPMCHPLYKLLIPHTRFTVQINSIGRALLLNEGGLSARAMSLGLKGFAEVMVRALSELTYDNLCVPNDFMERGVQDLPGYYFRDDSLAVWDAMERYVTDIITYYYPSDAAVEGDPELQCWVQEIFKECLLERQSSGFPTCLRTVPELIRYVTTIIYTCSARHAGVNSGQLEFTSWMPNFPPSMRRPPLEAKGLSTQQTFMDTLPDVKTTCIVLLVLWTLSREPDDKRPLGHFPDIHFVEDAPRRSMEAFRHRLNQISHDIRQRNKCLPIPYNYLDPVLIENSISI