Details from NCBI annotation

Gene Symbol Trappc1
Gene Name trafficking protein particle complex 1, transcript variant X2
Entrez Gene ID 101708354

Database interlinks

Part of NW_004624786.1 (Scaffold)

For more information consult the page for NW_004624786.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TRAPPC1 ENSCPOG00000002030 (Guinea pig)

Gene Details

trafficking protein particle complex 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000001837, Guinea pig)

Protein Percentage 99.31%
CDS Percentage 95.63%
Ka/Ks Ratio 0.01661 (Ka = 0.0031, Ks = 0.1877)

TRAPPC1 ENSG00000170043 (Human)

Gene Details

trafficking protein particle complex 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000302783, Human)

Protein Percentage 98.62%
CDS Percentage 95.17%
Ka/Ks Ratio 0.03247 (Ka = 0.0063, Ks = 0.1955)

Trappc1 ENSMUSG00000049299 (Mouse)

Gene Details

trafficking protein particle complex 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000099661, Mouse)

Protein Percentage 97.24%
CDS Percentage 90.8%
Ka/Ks Ratio 0.02646 (Ka = 0.0123, Ks = 0.4658)

Trappc1 ENSRNOG00000037627 (Rat)

Gene Details

trafficking protein particle complex 1 (Trappc1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000053911, Rat)

Protein Percentage 97.24%
CDS Percentage 90.8%
Ka/Ks Ratio 0.02803 (Ka = 0.0125, Ks = 0.446)

Genome Location

Sequence Coding sequence

Length: 438 bp    Location: 10514317..10512569   Strand: -
>XM_004857471.1
ATGACTGTCCACAACCTGTACCTATTTGACCGGAATGGAGTGTGTCTGCACTACAGCGAATGGCACCGCAAGAAGCAAGCAGGGATCCCCAAGGAGGAGGAGTTCAAGCTGATGTACGGGATGCTCTTCTCTATCCGCTCATTTGTCAGCAAGATGTCCCCGCTAGACATGAAGGACGGCTTCCTGGCCTTCCAAACTAGCCGTTACAAACTCCATTACTACGAGACGCCCACTGGGATCAAGGTTGTCATGAATACTGACTTGGGCGTGGGGCCCATCCGAGATGTGCTGCACCACATCTACAGTGCGCTGTACGTGGAACTGGTGGTAAAGAATCCTCTGTGCCCTCTGGGCCAAACTGTGCAAAGTGAGCTCTTCCGCTCCCGCCTAGACTCCTATGTCCGCTCTCTGTCTTTCTTCTCTGCCCGAGCTGGCTGA

Related Sequences

XP_004857528.1 Protein

Trappc1 PREDICTED: trafficking protein particle complex subunit 1 isoform X2 [Heterocephalus glaber]

Length: 145 aa      View alignments
>XP_004857528.1
MTVHNLYLFDRNGVCLHYSEWHRKKQAGIPKEEEFKLMYGMLFSIRSFVSKMSPLDMKDGFLAFQTSRYKLHYYETPTGIKVVMNTDLGVGPIRDVLHHIYSALYVELVVKNPLCPLGQTVQSELFRSRLDSYVRSLSFFSARAG