Sequence details NCBI ID: XM_004857466.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Cntrob
Gene Name centrobin, centrosomal BRCA2 interacting protein, transcript variant X4
Entrez Gene ID 101706536

Database interlinks

Part of NW_004624786.1 (Scaffold)

For more information consult the page for NW_004624786.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CNTROB ENSCPOG00000007169 (Guinea pig)

Gene Details

centrobin, centrosomal BRCA2 interacting protein

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000006466, Guinea pig)

Protein Percentage 89.17%
CDS Percentage 89.06%
Ka/Ks Ratio 0.18731 (Ka = 0.059, Ks = 0.3151)

CNTROB ENSG00000170037 (Human)

Gene Details

centrobin, centrosomal BRCA2 interacting protein

External Links

Gene Match (Ensembl Protein ID: ENSP00000369614, Human)

Protein Percentage 85.94%
CDS Percentage 87.63%
Ka/Ks Ratio 0.25378 (Ka = 0.0795, Ks = 0.3131)

Cntrob ENSMUSG00000032782 (Mouse)

Gene Details

centrobin, centrosomal BRCA2 interacting protein

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000090651, Mouse)

Protein Percentage 82.19%
CDS Percentage 82.75%
Ka/Ks Ratio 0.18033 (Ka = 0.1023, Ks = 0.5675)

Cntrob ENSRNOG00000008270 (Rat)

Gene Details

centrobin, centrosomal BRCA2 interacting protein (Cntrob), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000011185, Rat)

Protein Percentage 83.28%
CDS Percentage 83.8%
Ka/Ks Ratio 0.19393 (Ka = 0.0973, Ks = 0.5018)

Genome Location

Sequence Coding sequence

Length: 2727 bp    Location: 10514609..10532563   Strand: +
Raw sequence   
>XM_004857466.1
ATGGCCACATCAACTACCAGCCCCAGTTCACCTCTCCGGGCAGAGGATCTCCTGAGTGAGTCATCAGAACCCCCTGGACTGAACCAAGTGTCCTCTGAGGTGACCTCCCAGCTCTATACTTCTTTGCACCTCAGCCGTCAGGCAGAGGCCACTGCTCGAGCTCAGCTGTATTTAGCCTCCACCTCCCCACCTCCACATGAGGCCTTAGACAGCCTGGCTCAAGAGCTGAGTCGCAGCTTGTCAGTCGGATTAGAGAACAACTTGAAGAAAAAGGATGGTTTTAAGCATATCTTTGAGATGGAAAGTGTTCGAGGTCAACTCCAGACCATGCTCCAAACCTCACATGATGCAGCCTATCGGGACCCCCTCACTGCAGGTGCTGGCATAGAGAAGCGGGAAGAGGAGTCCTTTGACAGTGACAGCACAGCTACCTTGCTCAACACCCAGCTCCTGCAAGACATATCTCCACCCAGTTCAGCACAAGCTTTGGAGGAGTTGTTTCCCCGCTACACCAGTCTTCGACCGGGGCTCCCAGTTAATCCCCCGGATTTTCAGAGGCTGAGAGATGCACTGGATTCAGAGCATACCCGCCGCAAGCATTGTGAACGCCACATTCAGAGCCTGCAGACCCGAGTTCTAGAGCTACAGCAGCAGTTAGCTGTGGCTGTGGCTGCCGACCGCAAGAAAGATATCATGATTGAACAACTGGACAAGACCCTGGCCCGAGTGGTGGAGGGCTGGAATCGGCATGAGGCTGAGCGGACAGAAGTGCTTCGGGGACTACAAGAGGAACGCCAGGCAGCAGAACTCACCAGAAGCAAGCAGCAAGAAACAGTAACCCGCCTAGAACAAAGCCTTTCAGAAGCCATGGAGACCCTAAATCGGGAGCAGGAAGGTGCCAGACTGCAACAACGGGAAAGAGAGGTGCTGGAAGAAGAAAGGCAAGCTCTGACCCTGAGCTTGGAGGTTGAACAGCAGCGGAGTCATGCTCTGCAGGAAGAGCGGGATGAGGCTCGGGCTGGGCAACTCAGTGAGCATCGGAAGCTGGAGACCCTTCAGGTTGCCCTGGAAGAAGAGCGACAGGCCTGGGCCCAGCAAGAGCACCAGCTTAAGGAGCGCTATCAGACATTGCAGGGGGAGAGCCAGGCTCAGCTGGAAAGAGAAAAGGGGAACAGCCAGAGGGAGGCCCAAGCAGCTCGGGAAGCCCAGCAAGAGTTGGCATTGGTGCAGTCTGAGGTGCGGCGGCTGGAAGGGGAGCTGGACACGGCTCGGAGAGAGAGAGATGCCCTGCAGCTGGAGATGAGCTTGGTGCAGGCCCGGTTTGAAAGGCAGCGGATCCAGATGGAGTCAGAGCTGGCTGTGCAGCTAGAGCAGCAGGTGATGGAGCGGATGGCGCAGGCTCAGGAGAGCAGCCTACGGCAAGCAGCCTCCCTGAGGGAACATCACAGGAAGCAGCTGCAGGACCTTAATGGACAGCACCAGCAAGAACTGGCCACTCAGCTGGCTCAATTCAAAGTGGAAATGGCAGAACGAGAGGAACGGCAACAGCAGGTGGCTCAGGACTATGAGCTCAGACTGGCACGGGAGCAAGCACGGGTACGGGACCTTCAGAGTGGGAACAAGCAGCTGGAGGAGCAGCGAGTGGAGCTGGTGGAACGGCTCCAGGCCATGCTGCAGGCCCACTGGGATGAGGTCAACCAGCTGCTCGGCACTACCCTCCAGCCTCCTAACTCTCCAGTTCCTCCCACTGGGCCCTCCAGCTCTGATCTCCCAGAGACAGAGAAGGGGGAGAGGAGGATCTGGACCATGCCTCCTGTGGCTGTGGCCCTAAAGCCTGCGTTGCAGCAGAGCCGGGAAGCCAGGGATGCCAGGGACGAGCTGCCTGGAGTGCCTCCTGTTGACTGCAGCCCCTCCCCAGACCTTAGCCTCCTTCTGGGCCCCTCTTTTCTGAGCCAGCATTCCTTCCAGCCTCTGGAGCCCAAACCAGATCTCACTCCATCCATAGCTGAAGACTTCTCTGCACTTGGGGCCTTCCAAACTGATCACAGAGCAGAACGGCCATTCCCTGAGGAAGATGTAGGATCTGAGGGAGATGGCTTCCTAAAGCAAGGGCTGCCACCTGCTTCTCAGCTGGAAGGCCTCAAGAATTTTTTGCAGCAGCTGCTGGAAACAGTACCACAGAACAATGAGAGCCCCTCTGTTGATCTGCTGCCTCCCAAGTATGGTCCCCAGACTGTGCCATCTTGGGAAGAAGCCTCTCAAGTGCCACGCCTTCCACCCCCTGTCCATAAAACCAAAGTCCCTTTAGCCATGGCATCTAGTTGTTTCCGAGTCCATGAGGTTCCCTCTTCCTATTCACAAGGCAGTGGTCCCAGCACTGGCTCCCCAGAGAAAGGTGCAGATGGGCTCAGCTCCTCAAGGCAGCTGATGGAGATGTCTCAGCTGTTACGACAGTACCAGGCTCGGGGCTGGGGGACTCTTTCTGCTGAGGACCTGCTGCTGTGCTTGAAGAAGCTGGAACATGGCGGGACTGATAGCCGAGGGGAGAATGTCCCCAGAAGGAACCCAGACTCCCGCTTGGGTGAGATCTCCCGGAAAGAGATCCCTTCACAGGCTGTCCCTCGCTGCCTTGCTACAGCTCCTAAGTCTGATAAACCTCCTGCTCGGAAGAAAAGCAGCCACCCTACCCCTAGCAGCATGAGGAGTCGGGGAGGAATCTGGAAATGA

Related Sequences

XP_004857523.1 Protein

Cntrob PREDICTED: centrobin isoform X4 [Heterocephalus glaber]

Length: 908 aa      View alignments
>XP_004857523.1
MATSTTSPSSPLRAEDLLSESSEPPGLNQVSSEVTSQLYTSLHLSRQAEATARAQLYLASTSPPPHEALDSLAQELSRSLSVGLENNLKKKDGFKHIFEMESVRGQLQTMLQTSHDAAYRDPLTAGAGIEKREEESFDSDSTATLLNTQLLQDISPPSSAQALEELFPRYTSLRPGLPVNPPDFQRLRDALDSEHTRRKHCERHIQSLQTRVLELQQQLAVAVAADRKKDIMIEQLDKTLARVVEGWNRHEAERTEVLRGLQEERQAAELTRSKQQETVTRLEQSLSEAMETLNREQEGARLQQREREVLEEERQALTLSLEVEQQRSHALQEERDEARAGQLSEHRKLETLQVALEEERQAWAQQEHQLKERYQTLQGESQAQLEREKGNSQREAQAAREAQQELALVQSEVRRLEGELDTARRERDALQLEMSLVQARFERQRIQMESELAVQLEQQVMERMAQAQESSLRQAASLREHHRKQLQDLNGQHQQELATQLAQFKVEMAEREERQQQVAQDYELRLAREQARVRDLQSGNKQLEEQRVELVERLQAMLQAHWDEVNQLLGTTLQPPNSPVPPTGPSSSDLPETEKGERRIWTMPPVAVALKPALQQSREARDARDELPGVPPVDCSPSPDLSLLLGPSFLSQHSFQPLEPKPDLTPSIAEDFSALGAFQTDHRAERPFPEEDVGSEGDGFLKQGLPPASQLEGLKNFLQQLLETVPQNNESPSVDLLPPKYGPQTVPSWEEASQVPRLPPPVHKTKVPLAMASSCFRVHEVPSSYSQGSGPSTGSPEKGADGLSSSRQLMEMSQLLRQYQARGWGTLSAEDLLLCLKKLEHGGTDSRGENVPRRNPDSRLGEISRKEIPSQAVPRCLATAPKSDKPPARKKSSHPTPSSMRSRGGIWK