Sequence details NCBI ID: XM_004857454.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Kdm6b
Gene Name lysine (K)-specific demethylase 6B
Entrez Gene ID 101703654

Database interlinks

Part of NW_004624786.1 (Scaffold)

For more information consult the page for NW_004624786.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

KDM6B ENSCPOG00000004414 (Guinea pig)

Gene Details

lysine (K)-specific demethylase 6B

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000003983, Guinea pig)

Protein Percentage 88.52%
CDS Percentage 88.59%
Ka/Ks Ratio 0.27601 (Ka = 0.0722, Ks = 0.2617)

KDM6B ENSG00000132510 (Human)

Gene Details

lysine (K)-specific demethylase 6B

External Links

Gene Match (Ensembl Protein ID: ENSP00000254846, Human)

Protein Percentage 92.59%
CDS Percentage 90.53%
Ka/Ks Ratio 0.13865 (Ka = 0.04, Ks = 0.2882)

Kdm6b ENSMUSG00000018476 (Mouse)

Gene Details

KDM1 lysine (K)-specific demethylase 6B

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000091620, Mouse)

Protein Percentage 91.53%
CDS Percentage 87.89%
Ka/Ks Ratio 0.10477 (Ka = 0.0443, Ks = 0.4233)

Kdm6b ENSRNOG00000037613 (Rat)

Gene Details

lysine (K)-specific demethylase 6B (Kdm6b), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000060247, Rat)

Protein Percentage 90.58%
CDS Percentage 87.66%
Ka/Ks Ratio 0.12487 (Ka = 0.0512, Ks = 0.4096)

Genome Location

Sequence Coding sequence

Length: 4983 bp    Location: 10425230..10435117   Strand: +
Raw sequence   
>XM_004857454.1
ATGCATCGGGCAGTGGACCCTCCAGGGGCCCGCGCTGCACGGGAAGCCTTTGCCCTTGGGGGCCTGAGCTGCTCTGGGGCCTGGAGCTCCTGTCCGCCCCACCCCCTGCCTCGTAGTGCTTGGCTGCCTGGAGGCAGATGCTCAGCCAGTATTGGGCAGCCCCCACTCCCTGCTCCCCCACCCCCTTCACATGGCAGTAGCTCTGCGCACCCCAACAAACCATATTATGCTCCAGGGACGCCCACCCCAAGACCCCTCCATGGGAAGTTGGAATCCCTGCATGGCTGTGTACAGGCATTGCTCCGGGAGCCAGCCCAGCCAGGGCTGTGGGAACAGCTTGGACAGCTGTATGAGTCAGAGCATGACAGTGAGGAGGCCATACGCTGCTACCATAGCGCCCTTCGGTATGGGGGAAGCTTTGCTGAGCTGGGGCCCCGCATTGGCCGACTGCAGCAGACCCAGCTCTGGAACTTTCATGCCGGCTCCTGCCAACACCGAGCCAAGGTCCTGCCCCCGCTGGAGCAAGTGTGGAACCTGCTGCACCTTGAGCACAAGCGGAACTATGGGACCAAGCGGGGAGGTCCTCCAGTGAAGCGAGCTGCTGAACCCCCAGTTGTACAGCCTGTACCTCCTGCAGCACTCTCAGGGCCCTCAGGGGAAGAGGGCCTTAGCCCTGGAGGCAAGCGCAGGAGAGGCTGCAGCTCTGAACAGACTGGCCTTCCCCCTGGGCTGCCACTGCCTCCACCACCATTACCACCCCCACCCCCACCCCCTCTCTCTGGCCTGGTTACCAGCCCCCCGTTTCAGCTGAACAAGCCAGGGCTGTGGAGTACCCTGCATGGAGATGCCTGGGGCCCTGAGCGCAAGGGTTCAGGACCCCCAGAGCGCCAGGAGCAGCGGCACTTGCTGTCTCACTCATATCCCTACCCAGCTCCAGCCTACACCACGCATCCTCCCAGCCACCGGCTGGTCCCTACTGCACCCCCAGGCCCCGGCCCCCGCCCCCCAGGAGCAGAGAGCCATGGCTGCCTGCCTGCCACCCGTCCCCCCGGAAGTGACCTTAGAGAGAGCAGAGTTCAGAGGTCGCGGATGGACTCCAGCGTTTCACCAGCAGCAACTATCGCCTGCGTGCCTTACGCCCCTTCCCGGCCCCCTGGCCTCCCTGGCATTACCACCAGCAGCAGCAGCAGTAGCAGCAGCAGCGGCACCAGTCTCCGGGGTGTGGAGCTGAGTCCAGGCCTTCCTGGCGCTGACCATTACCAAACTCACTCGCTGGAGGTCTCCTCTCACCAGGGCCGCCTGGGGCCCTCGGCACACAGCAGTCGGAAACCGTTTTCGGCGGCTCCCACTGCCACTCCCCACCTACCCCTGCCACCTGGGCCCACCTCACCCCCTCCACCCCCCTGTCCTCGCCTCTTTCGTCCCCCACCACCTCCTTCCTGGGTGAAGGGCCCAGCCTGCCGGTCAGCCCGAGAAGATGGAGAGATCTTGGAGGAGCTCTTCTTTGGGGCTGAAGGACCCTCTCGCCCTCCGCCCCCTGCCCTCCCCCCACGTGAGGGCTTCTTGGGGCCGCCAGCCCCCCGCTTTTCTGTGGGCACTCAGGATTCACACCCCCCTCCCACTCCCCCAGCCACCAGCAGCAGCAGCAGCAGCAACAGCAACCACAACCACAACCACAGCCACAGCAGCAGCCCTAATGGGCCTGTGCCCTTCTCACCACCTCCTTATCTGTCCAGAAGTATAGAGCCCCTTCCCCGGCCACCCAGCCCAACACTGAGCCCCCAGGACCCCCCTCTTGCACCCCTGACCCTTGCCCTGCCTCCAGCTCCTCCCTCCTCTTGCCACCAAAATACCTCAGGAAGCTTCAGGCACTCGGAGAGCCCACGGCCCAGGGTCTCCTTCCCAAAGACCCCCGAGGTGGAGCCGGGGCCACTCCCAGGCCCCCTGAGTAAAGCCCCTCAGCCTGTGCCGCCTGGGGTTGGGGAACTGCCTGCCCGAGGCCCACGACTCTTTGATTTTCCCTCAACCCCTCTGGAGGACCAGTTTGAAGAGCCAGCTGAATTCAAGATCCTACCTGATGGGCTGGCTAACATCATGAAGATGCTGGATGAATCCATTCGAAAGGAGGAAGAACAGCAACAAGAGGCAGGAGTGGTTCCCCCACCTCCACTGAAGGAGCCCTTTGCGTCTCTACAGCCTCCATTCCCCAGTGACACAGCCCCAACTACCACTGCTGCCACCACTACTGCTGATGCCACCACCACCATCACTACCGCCACAACCACCGCTGCCGCCACCATTGCCACTGCCAATGCCACCACCCAGGAAGAGGAGAAGAAGCCACCACCAGCCCTACCACCACCACCACCGCCTCTAGCCAAGTTCCCTCCACCCTCCCAGCCACAGACAGCACCACCCCTACCACCCCCACCAGCCAGCCCGGCCAGCCTGCTCAAATCCTTGGCCTGCGTGCTGGAGGGACAGAAGTACTGTTACCGGGGGAATGGAGCAGCCGTTTCCACCCGGCCTGGACCTTTGCCCACCAGTCAGTATTCCCCTGGCCCCCCATCAGGTGCTACTGCCCCACCGCCCACCTCAGTGGCCCCTAGCACCCAGGGCTCTCCACAGCCCTCTGCTTCCTCGTCATCTCAGTTTTCTACCTCAGGCGGGCCCTGGGCCCGGGAGCACAGGGCGGGTGAAGAGCCAGCCCCGGGTCCTGCGACCTCCACCCAGCCACCCCCACCCTTGCCTCTGCCACCTGCTCGCTCTGAGTCTGAGGTGCTAGAAGAGATCAGTCGGGCTTGTGAAACCCTTGTAGAGCGGGTGGGCCGGAGTGCCATCGACCCAGGAGACACAGTGGACACAGCAGACCCATTGGACAGTGTGGCTGAGCGACTGGTGCCTCCTGCACAGGTCAAGGAGGAGAGTGGTGGTGTGGTGACAGCAGCAGCAGCAGGGCCAGGCAGTGGCAAGAGGCGCCAGAAGGAGCACCTGAAGGAGCACCGAAGGCACAGGCGGGCCTGTAAAGACAGTGTGGGTCGGCGGCCCCGAGAAGGGAGGGCAAAGGCCAAGGCACCCAAAGAGAAAAGCCGTCGGGTGCTAGGGAACCTGGACCTGCAAAGCGAGGAGATCCAAGGTCGTGAGAAGGTCCGGCCTGATCTTGGTGGGGCCTCTAAGGCCAAGCCACCCACAGCTCCTGCCCTTCAACCAGTTCCTGCCCCCTCTGCCCAGCCCACACCCCCATCAGCCCCTGTCCCCGGGAAGAAGACTCGGGAGGAAGCTCCAGGGCCTCCAGGTGTCAGCCGTGCTGACATGCTGAAGCTACGCTCACTTAGTGAGGGGCCCCCCAAGGAGCTGAAGATCAGGCTCATCAAGGTAGAGAGTGGTGACAAGGAAACCTTTATCGCCTCTGAGGTGGAAGAACGTCGACTGCGAATGGCAGACCTCACTATCAGCCACTGTGCTGCTGATGTCGTACGTGCCAGCAAGAATGCCAAGGTGAAAGGGAAATTTCGCGAGTCCTACCTTTCTCCTGCCCAGTCTGTAAAACCGAAGATCAATACTGAGGAGAAGCTTCCACGAGAAAAACTCAACCCCCCTACACCCAGCATCTATCTGGAGAGCAAACGAGATGCATTCTCACCGGTGCTGCTGCAGTTCTGTACAGACCCTCGAAATCCTATCACCGTGATCCGAGGCCTGGCAGGATCCCTGCGGCTTAACTTGGGCCTCTTCTCCACCAAGACGCTGGTGGAGGCAAGTGGTGAGCACACTGTAGAGGTACGAACCCAGGTGCAGCAGCCCTCAGATGAGAACTGGGATCTGACCGGCACGAGACAGATCTGGCCTTGTGAGAGCTCCCGTTCCCACACCACCATTGCCAAGTATGCGCAGTACCAGGCCTCGTCCTTCCAGGAGTCACTGCAGGAGGAGAAGGAGAGTGAGGATGAAGAGTCAGAGGAGCCAGACAGCACCACAGGAACCCCTCCTAGCAGCAATGCACCTGACCCAAAGAACCATCACATCATCAAATTTGGCACTAACATCGACCTGTCTGATGCCAAGCGGTGGAAGCCCCAGCTTCAGGAGTTGCTGAAGCTGCCTGCTTTCATGCGGGTAACATCCACAGGCAACATGCTCAGCCATGTGGGCCACACCATCCTGGGCATGAACACCGTGCAGCTATACATGAAGGTCCCCGGCAGCCGAACGCCAGGCCACCAAGAGAACAACAATTTCTGCTCTGTCAATATTAACATTGGCCCAGGAGACTGTGAATGGTTTGCAGTGCATGAGCACTACTGGGAGACCATCAGCGCCTTCTGTGATCGGCATGGTGTGGACTACTTAACAGGTTCCTGGTGGCCTATCCTGGATGACCTCTATGCTTCCAATATCCCTGTATACCGCTTCGTGCAGCGCCCAGGAGACCTTGTGTGGATTAATGCAGGGACTGTGCACTGGGTGCAGGCCACTGGCTGGTGCAACAACATTGCCTGGAACGTGGGACCCCTCACTGCCTATCAGTACCAGCTGGCCCTGGAACGATATGAGTGGAACGAGGTGAAGAACGTCAAATCCATTGTGCCCATGATTCATGTGTCCTGGAATGTAGCTCGAACAGTCAAAATCAGCGACCCCGACTTATTCAAGATGATCAAGTTCTGCCTCCTGCAGTCCATGAAGCACTGCCAGGTGCAGAGGGAGAGCCTAGTTCGGGGAGGGAAGAAAATAGCTTACCAGGGCCGAGTCAAGGACGAGCCCGCCTACTACTGCAATGAGTGCGATGTGGAGGTGTTCAATATCTTGTTCGTGACAAGTGAGAACGGCAGCCGCAACACATACCTGGTGCACTGTGAGGGCTGCGCGCGGCGCCGCAGCGCAGGCTTGCAGGGCGTGGTGGTGCTGGAGCAGTACCGCACCGAGGAGCTGGCGCAGGCCTACGACGCCTTCACGCTGGCCCCCACCAGTACGTCGCGATGA

Related Sequences

XP_004857511.1 Protein

Kdm6b PREDICTED: lysine-specific demethylase 6B [Heterocephalus glaber]

Length: 1660 aa      View alignments
>XP_004857511.1
MHRAVDPPGARAAREAFALGGLSCSGAWSSCPPHPLPRSAWLPGGRCSASIGQPPLPAPPPPSHGSSSAHPNKPYYAPGTPTPRPLHGKLESLHGCVQALLREPAQPGLWEQLGQLYESEHDSEEAIRCYHSALRYGGSFAELGPRIGRLQQTQLWNFHAGSCQHRAKVLPPLEQVWNLLHLEHKRNYGTKRGGPPVKRAAEPPVVQPVPPAALSGPSGEEGLSPGGKRRRGCSSEQTGLPPGLPLPPPPLPPPPPPPLSGLVTSPPFQLNKPGLWSTLHGDAWGPERKGSGPPERQEQRHLLSHSYPYPAPAYTTHPPSHRLVPTAPPGPGPRPPGAESHGCLPATRPPGSDLRESRVQRSRMDSSVSPAATIACVPYAPSRPPGLPGITTSSSSSSSSSGTSLRGVELSPGLPGADHYQTHSLEVSSHQGRLGPSAHSSRKPFSAAPTATPHLPLPPGPTSPPPPPCPRLFRPPPPPSWVKGPACRSAREDGEILEELFFGAEGPSRPPPPALPPREGFLGPPAPRFSVGTQDSHPPPTPPATSSSSSSNSNHNHNHSHSSSPNGPVPFSPPPYLSRSIEPLPRPPSPTLSPQDPPLAPLTLALPPAPPSSCHQNTSGSFRHSESPRPRVSFPKTPEVEPGPLPGPLSKAPQPVPPGVGELPARGPRLFDFPSTPLEDQFEEPAEFKILPDGLANIMKMLDESIRKEEEQQQEAGVVPPPPLKEPFASLQPPFPSDTAPTTTAATTTADATTTITTATTTAAATIATANATTQEEEKKPPPALPPPPPPLAKFPPPSQPQTAPPLPPPPASPASLLKSLACVLEGQKYCYRGNGAAVSTRPGPLPTSQYSPGPPSGATAPPPTSVAPSTQGSPQPSASSSSQFSTSGGPWAREHRAGEEPAPGPATSTQPPPPLPLPPARSESEVLEEISRACETLVERVGRSAIDPGDTVDTADPLDSVAERLVPPAQVKEESGGVVTAAAAGPGSGKRRQKEHLKEHRRHRRACKDSVGRRPREGRAKAKAPKEKSRRVLGNLDLQSEEIQGREKVRPDLGGASKAKPPTAPALQPVPAPSAQPTPPSAPVPGKKTREEAPGPPGVSRADMLKLRSLSEGPPKELKIRLIKVESGDKETFIASEVEERRLRMADLTISHCAADVVRASKNAKVKGKFRESYLSPAQSVKPKINTEEKLPREKLNPPTPSIYLESKRDAFSPVLLQFCTDPRNPITVIRGLAGSLRLNLGLFSTKTLVEASGEHTVEVRTQVQQPSDENWDLTGTRQIWPCESSRSHTTIAKYAQYQASSFQESLQEEKESEDEESEEPDSTTGTPPSSNAPDPKNHHIIKFGTNIDLSDAKRWKPQLQELLKLPAFMRVTSTGNMLSHVGHTILGMNTVQLYMKVPGSRTPGHQENNNFCSVNINIGPGDCEWFAVHEHYWETISAFCDRHGVDYLTGSWWPILDDLYASNIPVYRFVQRPGDLVWINAGTVHWVQATGWCNNIAWNVGPLTAYQYQLALERYEWNEVKNVKSIVPMIHVSWNVARTVKISDPDLFKMIKFCLLQSMKHCQVQRESLVRGGKKIAYQGRVKDEPAYYCNECDVEVFNILFVTSENGSRNTYLVHCEGCARRRSAGLQGVVVLEQYRTEELAQAYDAFTLAPTSTSR