Sequence details NCBI ID: XM_004857450.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Tp53
Gene Name tumor protein p53, transcript variant X3
Entrez Gene ID 101701769

This gene is present in the GenAge database and has been identified as potentially important to ageing in humans.

Database interlinks

Part of NW_004624786.1 (Scaffold)

For more information consult the page for NW_004624786.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TP53 ENSCPOG00000014252 (Guinea pig)

Gene Details

Cavia porcellus tumor protein p53 (Tp53), mRNA.

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000012841, Guinea pig)

Protein Percentage 87.72%
CDS Percentage 89.26%
Ka/Ks Ratio 0.25804 (Ka = 0.0677, Ks = 0.2623)

TP53 ENSG00000141510 (Human)

Gene Details

tumor protein p53

External Links

Gene Match (Ensembl Protein ID: ENSP00000269305, Human)

Protein Percentage 83.63%
CDS Percentage 85.85%
Ka/Ks Ratio 0.24968 (Ka = 0.0933, Ks = 0.3738)

Trp53 ENSMUSG00000059552 (Mouse)

Gene Details

transformation related protein 53

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000104298, Mouse)

Protein Percentage 78.81%
CDS Percentage 79.93%
Ka/Ks Ratio 0.22006 (Ka = 0.1356, Ks = 0.6164)

Genome Location

Sequence Coding sequence

Length: 1176 bp    Location: 10282677..10266312   Strand: -
Raw sequence   
>XM_004857450.1
ATGGAAGAGCCACAGTCGGATCTCAGCATCGAGCCTCCACTGAGTCAGGAGACATTTTCAGACTTATGGAAACTACTTCCTGAAAACAACGTTCTGTCCAGCTCACTGTCCTCTCCCATGGATGATCTGCTGCTGTCCCCAGAAGATGTTGTAAACTGGCTGGGAGGAAACCCAGATGAAGATGTCCAAGTGTCAGCAGCTCCTGTACCAGAGCCCCCAACACCAGTGGCCCCTGCCCCGGCAGCTCCCGCACCAGCCACTTCCTGGCCTCTGTCATCCTCCGTCCCTTCCCATAAGACCTACCAAGGCAACTATGGTTTCCATCTGGGCTTCCTTCAGTCTGGGACGGCCAAATCTGTCACATGCACGTACTCCCCTGTTCTCAACAAGTTATTCTGCCAACTGGCAAAGACCTGCCCTGTGCAAGTGTGGGTCGAATCACCACCCCCACCTGGCACCCGAGTCCGTGCCATGGCCATCTACAAGAAGTCACAGCACATGACAGAAGTTGTGAGGCGCTGCCCCCACCATGAGCGCTGCTCCGATAGTGATGGCCTGGCCCCTCCTCAGCATCTTATCCGGGTGGAAGGAAATCTGCGTGCAGAATATTTGGATGACAGAACCACTTTTCGCCATAGCGTGGTGGTACCCTATGATCTGCCTGAGGTTGGCTCTGACTGTACCACCATCCACTACAACTATATGTGCAACAGTTCTTGCATGGGGGGCATGAACCGTAGGCCCATCCTCACCATTATCACACTGGAAGACTCCAGTGGGAACCTGCTGGGGCGGAACAGCTTTGAGGTGCGTGTTTGTGCCTGTCCTGGGAGAGACCGGCGCACAGAGGAAGAAAATTTCCACAAGAAAGGGGGGTCATGCCCAGAGCCAACACCAGGAAGCATTAAGCGAGCACTGCCCACTGGCACCAACTCTTCTCCTCAGCCAAAGAAGAAACCACTGGATGGGGAATATTTCACCCTTAAGATCCGTGGGCGTGAACGCTTTGAGATGTTCCGAGAGCTAAATGAGGCCTTGGAACTCAAGGATGCCCAAACTGAGAAGGAGCCAGGGGAGAGCAGGCCTCACTCAAGCTACCTGAAGTCTAAGAAGGGGCAGTCTACCTCCTGTCATAAAAAACTAATGTTCAAGAAAGAAGGACCTGATTCAGACTGA

Related Sequences

XP_004857507.1 Protein

Tp53 PREDICTED: cellular tumor antigen p53 isoform X3 [Heterocephalus glaber]

Length: 391 aa      View alignments
>XP_004857507.1
MEEPQSDLSIEPPLSQETFSDLWKLLPENNVLSSSLSSPMDDLLLSPEDVVNWLGGNPDEDVQVSAAPVPEPPTPVAPAPAAPAPATSWPLSSSVPSHKTYQGNYGFHLGFLQSGTAKSVTCTYSPVLNKLFCQLAKTCPVQVWVESPPPPGTRVRAMAIYKKSQHMTEVVRRCPHHERCSDSDGLAPPQHLIRVEGNLRAEYLDDRTTFRHSVVVPYDLPEVGSDCTTIHYNYMCNSSCMGGMNRRPILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENFHKKGGSCPEPTPGSIKRALPTGTNSSPQPKKKPLDGEYFTLKIRGRERFEMFRELNEALELKDAQTEKEPGESRPHSSYLKSKKGQSTSCHKKLMFKKEGPDSD