Sequence details NCBI ID: XM_004857439.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Mpdu1
Gene Name mannose-P-dolichol utilization defect 1
Entrez Gene ID 101698908

Database interlinks

Part of NW_004624786.1 (Scaffold)

For more information consult the page for NW_004624786.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

MPDU1 ENSCPOG00000004911 (Guinea pig)

Gene Details

mannose-P-dolichol utilization defect 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000004421, Guinea pig)

Protein Percentage 90.69%
CDS Percentage 89.2%
Ka/Ks Ratio 0.17055 (Ka = 0.0542, Ks = 0.318)

MPDU1 ENSG00000129255 (Human)

Gene Details

mannose-P-dolichol utilization defect 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000250124, Human)

Protein Percentage 92.31%
CDS Percentage 87.99%
Ka/Ks Ratio 0.11048 (Ka = 0.0464, Ks = 0.4203)

Mpdu1 ENSMUSG00000018761 (Mouse)

Gene Details

mannose-P-dolichol utilization defect 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000018905, Mouse)

Protein Percentage 88.66%
CDS Percentage 87.31%
Ka/Ks Ratio 0.16337 (Ka = 0.0633, Ks = 0.3874)

Mpdu1 ENSRNOG00000012162 (Rat)

Gene Details

mannose-P-dolichol utilization defect 1 (Mpdu1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000017201, Rat)

Protein Percentage 85.43%
CDS Percentage 86.1%
Ka/Ks Ratio 0.22867 (Ka = 0.0854, Ks = 0.3736)

Genome Location

Sequence Coding sequence

Length: 744 bp    Location: 10199141..10202984   Strand: +
Raw sequence   
>XM_004857439.1
ATGGCGGCCGAGAGAGATCGGCTGCTCAAACGGGTGCTGGTGCCAATTCTTTTACCTGAGAAATGTTACGACCAACTTTTCGTCCAGTGGGATTTACTTCATGTTCCTTGCCTCAAGATTCTCCTCAGCAAAGGCCTGGGGCTGGGCATTGTGGCTGGGTCACTTCTCGTAAAGCTGCCCCAGGTATTTAAAATCCTGGGAGCCAAGAGTGCAGAAGGGCTGAGCCTCCAGTCTGTAATTCTGGAGCTAGTGGCATTAACTGGGACTGTGGTCTACAGCCTCACCAACAACTTCCCTTTCAGCTCTTGGGGTGAAGCCCTGTTCCTGATGCTCCAGACAATTACCATCTGCTTCCTGATTATGCACTTCAGAGGACAGACTGTAAAAGGAGTTGCTTTCCTAGCCTGCTACGTGCTGATCCTGCTGGTGCTGCTTTCACCACTTACACCACTGACTGTAGTCACCCTGCTCCAGGCTTCTAATGTGCCTGCTGTGGTAGTGGGAAAGCTGCTCCAGGCAGCCGCGAACTACAGCAATGGGCACACAGGTCAGCTCTCAGCTATCACAGTTTTTCTGCTATTTGGGGGCTCCCTGACCAGAATCTTTACTTCCATCCAGGAAACTGGAGACCCCCTCATGGCTGGAGTCTTTGTGGTCTCTTCCCTCTGCAATGGCCTCATTGCTGCCCAGGTCCTCTTCTACTGGAACACAAAGCCTCCCCACAAGCAGAAAAAGGAGCAGTAG

Related Sequences

XP_004857496.1 Protein

Mpdu1 PREDICTED: mannose-P-dolichol utilization defect 1 protein [Heterocephalus glaber]

Length: 247 aa      View alignments
>XP_004857496.1
MAAERDRLLKRVLVPILLPEKCYDQLFVQWDLLHVPCLKILLSKGLGLGIVAGSLLVKLPQVFKILGAKSAEGLSLQSVILELVALTGTVVYSLTNNFPFSSWGEALFLMLQTITICFLIMHFRGQTVKGVAFLACYVLILLVLLSPLTPLTVVTLLQASNVPAVVVGKLLQAAANYSNGHTGQLSAITVFLLFGGSLTRIFTSIQETGDPLMAGVFVVSSLCNGLIAAQVLFYWNTKPPHKQKKEQ