Sequence details NCBI ID: XM_004857428.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Tnfsf13
Gene Name tumor necrosis factor (ligand) superfamily, member 13, transcript variant X1
Entrez Gene ID 101726318

Database interlinks

Part of NW_004624786.1 (Scaffold)

For more information consult the page for NW_004624786.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ENSCPOG00000004894 (Guinea pig)

Gene Details

Uncharacterized protein

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000020659, Guinea pig)

Protein Percentage 90.44%
CDS Percentage 91.83%
Ka/Ks Ratio 0.25407 (Ka = 0.0497, Ks = 0.1955)

Tnfsf13 ENSRNOG00000014171 (Rat)

Gene Details

tumor necrosis factor (ligand) superfamily, member 13 (Tnfsf13), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000053740, Rat)

Protein Percentage 73.75%
CDS Percentage 76.81%
Ka/Ks Ratio 0.31579 (Ka = 0.1892, Ks = 0.599)

Genome Location

Sequence Coding sequence

Length: 1227 bp    Location: 10166168..10179500   Strand: +
Raw sequence   
>XM_004857428.1
ATGGCCGCCCGTCGGAGCCAGAGGCGGAGGGGGCGCCGGGGGGAGCCGGGCACCGCCCTACTGGCCCCGCTTGTGCTGGGCCTGGGCCTGGCGCTGGCCTGCCTTGGCCTCCTGCTAGCCGTGGTCAGCCTGGGGAGCCGGGCATCGCTGTCTGCCCAGCAGGATCCTTCCCAGGGGGAGCTGGAGGCAGAGGACCAGGAGCCACGGGAACTGAATCCCCAGACAGAGGAGAGCCAGGATGTTGTGCCTTTCCAGAAACTAGTCCGGTCTCGCAGAAGTGCACCTAAAGGCCGGAAAATACGGGCTCGAAGAGCAATTGCAGCTCACTATGAAGTTCACCCACGACCGGGACAGGACGGAGCGCAGGCAGGTATGGATGGGACAGTGAGTGGCTGGGAAGAAGCCAAAATCAACAGCTCCAACCCTCTGCGCTATGATCGTCAGACTGCGGAATTTAGAGTCACCAGGGCTGGGCTCTACTACCTGTACTGTCAGGTGCACTTTGATGAGGGGAAGGCTGTTTACCTGAAGCTGGACTTGCTGGTGGATGATGTGCTGGCCCTGCGCTGCCTGGAGGAGTTTTCAGCCACAGCAGCAAGTTCCCTCGGGCCCCAGCTTCGACTCTGTCAAACAGAGCTGCGAAGCCTAAGGAGGGAAGTGAGCCAGCTGCAGAAGAGCGGAGGGCCCTCCCAGAAAGGGGAAGGGTATCCCTGGGAGAGCCTCCTTCAGCAGAGTCCTGATGTCCTGGAAGCCTGGGAAAATGGGGAGAGATGGAGGAGAAGGAGAGCAGTGCTCACCCAGAAGCGGAAGAAGAAGCGCTCAGTTCTACATCTTGTTCCCATTAACGTTACTTCCAAGGAGGATTCTGATGTGACAGAGGTGATGTGGCAGCCAGCTCTCAGGCGTGGAAGAGGTCTGCAGGCCCAAGGATTCGTTGTCCGAGTCTGGGACGCTGGAGTTTATCTGCTGTATAGCCAGGTCCTGTTTCATGATGTGACTTTCACCATGGGTCAGGTGGTCTCTCGGGAAGGCCACGGAAGGCAGGAGACTCTATTTCGATGTATACGAAGCATGCCCTCTGACCCTGACAGGGCCTACAATAGCTGCTACAGTGCAGGTGTCTTCCATTTACACCAAGGGGATACTCTCAGTGTCATAATTCCCCGGGCAAAGGCGAAACTTAGTCTCGCTCCACATGGAACCTTTCTGGGGTTTGTGAAACTGTGA

Related Sequences

XP_004857485.1 Protein

Tnfsf13 PREDICTED: tumor necrosis factor ligand superfamily member 13-like isoform X1 [Heterocephalus glaber]

Length: 408 aa      
>XP_004857485.1
MAARRSQRRRGRRGEPGTALLAPLVLGLGLALACLGLLLAVVSLGSRASLSAQQDPSQGELEAEDQEPRELNPQTEESQDVVPFQKLVRSRRSAPKGRKIRARRAIAAHYEVHPRPGQDGAQAGMDGTVSGWEEAKINSSNPLRYDRQTAEFRVTRAGLYYLYCQVHFDEGKAVYLKLDLLVDDVLALRCLEEFSATAASSLGPQLRLCQTELRSLRREVSQLQKSGGPSQKGEGYPWESLLQQSPDVLEAWENGERWRRRRAVLTQKRKKKRSVLHLVPINVTSKEDSDVTEVMWQPALRRGRGLQAQGFVVRVWDAGVYLLYSQVLFHDVTFTMGQVVSREGHGRQETLFRCIRSMPSDPDRAYNSCYSAGVFHLHQGDTLSVIIPRAKAKLSLAPHGTFLGFVKL