Sequence details NCBI ID: XM_004857414.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Spem1
Gene Name spermatid maturation 1
Entrez Gene ID 101722000

Database interlinks

Part of NW_004624786.1 (Scaffold)

For more information consult the page for NW_004624786.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SPEM1 ENSCPOG00000022568 (Guinea pig)

Gene Details

spermatid maturation 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000016644, Guinea pig)

Protein Percentage 76.8%
CDS Percentage 84.53%
Ka/Ks Ratio 0.43936 (Ka = 0.1355, Ks = 0.3085)

SPEM1 ENSG00000181323 (Human)

Gene Details

spermatid maturation 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000315554, Human)

Protein Percentage 65.57%
CDS Percentage 77.38%
Ka/Ks Ratio 0.46762 (Ka = 0.227, Ks = 0.4854)

Spem1 ENSMUSG00000041165 (Mouse)

Gene Details

sperm maturation 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000037500, Mouse)

Protein Percentage 69.74%
CDS Percentage 78.4%
Ka/Ks Ratio 0.42456 (Ka = 0.201, Ks = 0.4735)

Spem1 ENSRNOG00000015419 (Rat)

Gene Details

spermatid maturation 1 (Spem1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000020676, Rat)

Protein Percentage 70.26%
CDS Percentage 77.56%
Ka/Ks Ratio 0.35896 (Ka = 0.1974, Ks = 0.5499)

Genome Location

Sequence Coding sequence

Length: 921 bp    Location: 10034685..10036388   Strand: +
Raw sequence   
>XM_004857414.1
ATGGCCATGGCTGAGCATCCACAGCCTGGGTGGGCCTTGTATCACAGCCCCACCAACAACAACTGCCAGGACGTGGGCAATTCTATCCTACTGCTATTGGGTCTCATCATCTGCATTAACATTGGCATCAATATGGTGACCCTGCTCTGGAGCCGAGTCCGTGTCATCTTACACCGAATGTTCCATATCATCTGTGAGAAAGAAACTGCTAAGTCATCCTCACTTGGGAAACCAACCAAGCTGAAGAAGCAGAGCTCCCCTGCAGTCCATCTTCGATGCACTATGGACCCTGTGAAAATGACCATGACCCCTCTATCCACTCGTCATCATCGCCATCGAGCCTCTCCATTGTTCTGTGCCTACCACCCACTAGCTTGGACCCCTGATACTGAGGATGAAAAGCCCCCAAATTGGAACCCAACAATCTGTACCCACCACTGGAAAGGCCCCAAAGACTGGGGAGGTTTCCAACACACACCAGAGACCTGGGATTCCTGGACTCAGGACACTCTGGAGCTACCTCCCCATACTATCTGCTTCCAGCAAACTGTAGAGAAAAAGCCACTCAAAACAGAGATCCAGTCCGAGCAGAGCCTAGAGGCCTATGTATATCCGGTAAACCCCTCACCTCCTTGTGGGGAGGCTGTGAACCACAAGAACACTAGGGCAGGGGGAGAGGCTGAGGCCACACAGAGTCACCCTGCCCCACCACCCTTCCTGGGCCCAGCAATCATCCCTGAAATCCCCCGGCGACGGTCCTCGGGCCGTACAGTGTATGATGCCCGAGATGTGAGACGGCGGCTTCAGGAACTGACCCAGGAGGTGGAGGCCTTGTCCCACTGCTACCCCTTTGTGTCTGGATCCAGCACTGCTGAGGGGACAGGCAAGGACTGGGTGTATCATTCTGTGGCAGGGAGGTGA

Related Sequences

XP_004857471.1 Protein

Spem1 PREDICTED: spermatid maturation protein 1 [Heterocephalus glaber]

Length: 306 aa      View alignments
>XP_004857471.1
MAMAEHPQPGWALYHSPTNNNCQDVGNSILLLLGLIICINIGINMVTLLWSRVRVILHRMFHIICEKETAKSSSLGKPTKLKKQSSPAVHLRCTMDPVKMTMTPLSTRHHRHRASPLFCAYHPLAWTPDTEDEKPPNWNPTICTHHWKGPKDWGGFQHTPETWDSWTQDTLELPPHTICFQQTVEKKPLKTEIQSEQSLEAYVYPVNPSPPCGEAVNHKNTRAGGEAEATQSHPAPPPFLGPAIIPEIPRRRSSGRTVYDARDVRRRLQELTQEVEALSHCYPFVSGSSTAEGTGKDWVYHSVAGR