Sequence details NCBI ID: XM_004857409.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Plscr3
Gene Name phospholipid scramblase 3, transcript variant X5
Entrez Gene ID 101719533

Database interlinks

Part of NW_004624786.1 (Scaffold)

For more information consult the page for NW_004624786.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TMEM256-PLSCR3 ENSCPOG00000009287 (Guinea pig)

Gene Details

TMEM256-PLSCR3 readthrough (NMD candidate)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000008337, Guinea pig)

Protein Percentage 91.41%
CDS Percentage 89.58%
Ka/Ks Ratio 0.14086 (Ka = 0.0455, Ks = 0.3227)

TMEM256-PLSCR3 ENSG00000187838 (Human)

Gene Details

TMEM256-PLSCR3 readthrough (NMD candidate)

External Links

Gene Match (Ensembl Protein ID: ENSP00000438547, Human)

Protein Percentage 93.9%
CDS Percentage 90.4%
Ka/Ks Ratio 0.09102 (Ka = 0.0313, Ks = 0.3438)

Plscr3 ENSMUSG00000019461 (Mouse)

Gene Details

phospholipid scramblase 3

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000104273, Mouse)

Protein Percentage 91.53%
CDS Percentage 85.08%
Ka/Ks Ratio 0.08135 (Ka = 0.0479, Ks = 0.5883)

Plscr3 ENSRNOG00000027914 (Rat)

Gene Details

phospholipid scramblase 3 (Plscr3), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000035566, Rat)

Protein Percentage 90.17%
CDS Percentage 85.76%
Ka/Ks Ratio 0.10364 (Ka = 0.0539, Ks = 0.5203)

Genome Location

Sequence Coding sequence

Length: 888 bp    Location: 10017381..10003626   Strand: -
Raw sequence   
>XM_004857409.1
ATGGCAGGTTACTTACCCCCCAAAGGCTACGCCCCTTCGCCCCCACCTCCCTACCCTGTGACCACCGGGTACCCGGAGCCCGTGCTGCATCCTGGGCCCGTGCAGGCTCCCCTGCCCGCCCAGGTGCCTCCCCCTGCGCCTGGCTTCGCTCTCTTCCCTTCGCCGGGCCCCGTGGCCCCCGGGCCTCCTGCCCCCTTCTCGCCACTGCCAGGGCTGCCTTCTGGCCTCGAGTTCCTGGCACAGATTGATCAGATCTTGATTCACCAGAAGGCTGAGCGAGTGGAAACGTTCCTAGGCTGGGAGACCTGTAACCGGTATGAATTGCGCTCAGGCGCCGGGCAGCCCCTGGGCCAGGCGGCTGAGGAGAGCAACTGCTGTGCCCGCCTGTGCTGTGGTGCCCGCCGGCCGCTTCGTGTCCGCCTGGCAGACTCCGGGGACCGAGAAGTGCTTCGCCTGATCCGTCCACTCCACTGTGGCTGCCTGTGCTGCCCCTGTGGCCTCCAGGAGATGGAAGTACAGGCTCCACCAGGCACTACCATTGGCCATGTTCTACAGACCTGGCATCCCTTTCTCCCTAAGTTCTCCATCCAAGATGCCGATCGCCAGACAGTCCTGCGAGTGGTGGGACCTTGCTGGACCTGTGGCTGTGGCATAGACACCAACTTTGAGGTGAAGACCAGGGATGAATCACGCAGTGTAGGCCGCATCAGCAAGCAGTGGGGGGGGCTCCTGCAAGAAGCCCTCACAGATGCTGATGACTTCGGCCTACAATTTCCTCTGGATCTGGATGTGAGGGTGAAGGCTGTGCTGCTGGGGGCCACATTCCTCATTGACTACATGTTCTTCGAGAAACGAGGAGGTGCTGGGCCCTCTGCCATCACCAGTTAG

Related Sequences

XP_004857466.1 Protein

Plscr3 PREDICTED: phospholipid scramblase 3 isoform X5 [Heterocephalus glaber]

Length: 295 aa      View alignments
>XP_004857466.1
MAGYLPPKGYAPSPPPPYPVTTGYPEPVLHPGPVQAPLPAQVPPPAPGFALFPSPGPVAPGPPAPFSPLPGLPSGLEFLAQIDQILIHQKAERVETFLGWETCNRYELRSGAGQPLGQAAEESNCCARLCCGARRPLRVRLADSGDREVLRLIRPLHCGCLCCPCGLQEMEVQAPPGTTIGHVLQTWHPFLPKFSIQDADRQTVLRVVGPCWTCGCGIDTNFEVKTRDESRSVGRISKQWGGLLQEALTDADDFGLQFPLDLDVRVKAVLLGATFLIDYMFFEKRGGAGPSAITS