Details from NCBI annotation

Gene Symbol Rpain
Gene Name RPA interacting protein, transcript variant X3
Entrez Gene ID 101696920

Database interlinks

Part of NW_004624786.1 (Scaffold)

For more information consult the page for NW_004624786.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

RPAIN ENSCPOG00000003675 (Guinea pig)

Gene Details

RPA interacting protein

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000003316, Guinea pig)

Protein Percentage 86.45%
CDS Percentage 88.79%
Ka/Ks Ratio 0.26878 (Ka = 0.0757, Ks = 0.2816)

RPAIN ENSG00000129197 (Human)

Gene Details

RPA interacting protein

External Links

Gene Match (Ensembl Protein ID: ENSP00000385814, Human)

Protein Percentage 75.8%
CDS Percentage 83.26%
Ka/Ks Ratio 0.36486 (Ka = 0.1411, Ks = 0.3867)

Rpain ENSMUSG00000018449 (Mouse)

Gene Details

RPA interacting protein

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000018593, Mouse)

Protein Percentage 72.6%
CDS Percentage 78.23%
Ka/Ks Ratio 0.26353 (Ka = 0.1708, Ks = 0.6483)

Rpain ENSRNOG00000006913 (Rat)

Gene Details

RPA interacting protein (Rpain), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000009082, Rat)

Protein Percentage 72.6%
CDS Percentage 79.0%
Ka/Ks Ratio 0.26863 (Ka = 0.1651, Ks = 0.6145)

Genome Location

Sequence Coding sequence

Length: 783 bp    Location: 9231760..9239065   Strand: +
>XM_004857336.1
ATGGACGGGAAAACAAAGCTTCCCAGAATTTCCTGCGAGCTGAGTTTGGGCCCGAAACTACAACTCCCAGAGTTCTGTGTGCGCTCCTGGGGGCGGGGCTTTGACGGCGGTTCGGGAGAAGAGATGGCGGAGCAGGCTGGCTCTCACCACCGATCACTATACAAACAGGTGTTCTCTCCGCACTGGAAAGAGGCTTTCCGGCAGGGATGCCTGGCAAGAATGAGAAACAGCCGGGACAGGTTCCTGAACAAGTACCGCCAGGCTGGAGGCAGTATGCCAGGGAGAGCTCCAAGTACCCTTCTAGTGCAAGAGGTGATGGTGGAAGAGTGGAACTCTTTCCAGTCAATGCAGAACTATCCAGAGGAGTTGGCTCAGTTGGGGTTGTCGATTGACTTGGCTGTGCTGGAGGAAATCCAACAGGAGCTGATTGATGAAGAACAGTCCATAATCAGCGAGTATGAGAAGAGCTTGCAGTTTGATGAAAAATGTCTCAGCATCATGCTAGCTGAGTGGGAAGCAAACTCCTTCATCTGTCCTGTGTGTACAAAGTACAACTTGAGAGTAATAGGAGGTGTGGTGGTATGTCAGTGTGGCCTAAACATCCCATCTCATTCTGCAGAGCTGACAGAACAGAAGCTGCGTGCCTGTTTAGAGGCTAGTTTAAATGACCACAGTGCACATTGTCCCCATACCCCTGAATTTTCAGTCACTGATGGAACAGAAGAAAAGCCCAGTCTTCTCATGACCTGTCTGGCTTGTGACACTTGGTCTGTGATCCTGTAG

Related Sequences

XP_004857393.1 Protein

Rpain PREDICTED: RPA-interacting protein isoform X3 [Heterocephalus glaber]

Length: 260 aa      View alignments
>XP_004857393.1
MDGKTKLPRISCELSLGPKLQLPEFCVRSWGRGFDGGSGEEMAEQAGSHHRSLYKQVFSPHWKEAFRQGCLARMRNSRDRFLNKYRQAGGSMPGRAPSTLLVQEVMVEEWNSFQSMQNYPEELAQLGLSIDLAVLEEIQQELIDEEQSIISEYEKSLQFDEKCLSIMLAEWEANSFICPVCTKYNLRVIGGVVVCQCGLNIPSHSAELTEQKLRACLEASLNDHSAHCPHTPEFSVTDGTEEKPSLLMTCLACDTWSVIL