Sequence details NCBI ID: XM_004857333.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Rabep1
Gene Name rabaptin, RAB GTPase binding effector protein 1
Entrez Gene ID 101696551

Database interlinks

Part of NW_004624786.1 (Scaffold)

For more information consult the page for NW_004624786.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

RABEP1 ENSCPOG00000003663 (Guinea pig)

Gene Details

rabaptin, RAB GTPase binding effector protein 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000003307, Guinea pig)

Protein Percentage 96.35%
CDS Percentage 93.61%
Ka/Ks Ratio 0.07954 (Ka = 0.0178, Ks = 0.2244)

RABEP1 ENSG00000029725 (Human)

Gene Details

rabaptin, RAB GTPase binding effector protein 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000262477, Human)

Protein Percentage 96.17%
CDS Percentage 92.46%
Ka/Ks Ratio 0.06517 (Ka = 0.0184, Ks = 0.2828)

Rabep1 ENSMUSG00000020817 (Mouse)

Gene Details

rabaptin, RAB GTPase binding effector protein 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000075619, Mouse)

Protein Percentage 95.59%
CDS Percentage 89.98%
Ka/Ks Ratio 0.04463 (Ka = 0.021, Ks = 0.4714)

Rabep1 ENSRNOG00000005015 (Rat)

Gene Details

rabaptin, RAB GTPase binding effector protein 1 (Rabep1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000050017, Rat)

Protein Percentage 95.13%
CDS Percentage 89.87%
Ka/Ks Ratio 0.04976 (Ka = 0.0233, Ks = 0.4678)

Genome Location

Sequence Coding sequence

Length: 2589 bp    Location: 9061082..9190190   Strand: +
Raw sequence   
>XM_004857333.1
ATGGCGCAGCCGGGCCCGGCTCCCCAGCCTGACGTTTCTCTTCAGCAAAGAGTAGCAGAATTGGAAAAAATCAATGCAGAATTTTTACGTGCACAGCAGCAGCTTGAGCAAGAATTTAATCAAAAGAGAGCAAAATTTAAGGAGTTATATTTAGCCAAAGAGGAGGATCTGAAGAGGCAAAATGCAGTACTACAAGCTGCGCAGGATGATTTGGGACACCTGCGAACACAGCTGTGGGAAGCACAAGCAGAAATGGAAAATATTAAGGCTATTGCCACAGTTTCTGAAAATACCAAACAAGAAGCCATAGATGAAGTGAAAAGGCAGTGGAGGGAAGAAGTTGCTTCGCTTCAGGCTGTTATGAAAGAAACAGTTCGTGACTATGAGCACCAGTTTCACCTCAGGCTGGAGCAGGAGCGAACACAGTGGGCACAATATCGAGAATCTTCGGAAAGAGAAATAGCTGATTTGAGACGAATGCTGTCTGAAGGCCAAGAGGAAGAAAATTTAGAAAATGAAATGAAAAAGGCCCAAGAAGATGCTGAAAAACTTCGGTCTGTTGTGATGCCCATGGAGAAGGAAATTGCAGCTTTGAAAGATAAGCTGACAGAGGCTGAAGACAAGATTAAAGAGTTGGAGGCCTCAAAGGTTAAAGAACTGAATCATTATCTGGAAGCTGAGAAATCTTGTAGGACTGATCTGGAGATGTATGTAGCTGTTTTGAATACTCAGAAATCTGTTCTTCAGGAAGATGCTGAAAAACTTCGGAAAGAATTACATGAAGTTTGCCATCTCTTGGAGCAAGAGCGACAGCAACACAACCAGTTAAAACATACATGGCAGAAGGCTAATGACCAGTTTCTGGAATCTCAGCGTTTGCTGATGAGAGACATGCAGCGAATGGAGATTGTGCTAACTTCAGAACAGCTCCGACAAGTTGAAGAACTGAAGAAGAAAGATCAGGAAGATGATGAACAACAGAAACTTAATAAGAGAAAAGATCATAAAAAAACAGACATTGAAGAAGAACTAAAAGTACCAGTAGTATGTGCTTTAACTCAAGAAGAATCTTCAGTCCACTTATCAAATGAAGAGGAGCATGTAGACAGTACCCATGGTTCAGTCCATTCCTTAGATGCAGATTTATTGTTACCGTCTGTAGATCCATTCAGTAAATCGGATAATGACATGTTTAAAGATGGACTCAGGAGAGCACAGTCTACAGACAGCTTGGGAACCTCGGGCTCATTGCAGTCCAAAGCTTTAGGCCATAACTTCAAAGCAAAATCTGCTGGAAACCTTGATGAGTCGGATTTTGGACCTCTGGTAGGAGCAGATTCAGTATCTGAGAACTTTGATACTGCATCACTTGGGTCACTGCAAATGCCAAGTGGGTTTATGTTAACCAAAGATCAAGAAAGAGCAATCAAGGCGATGACACCAGAACAAGAAGAGACAGCATCCCTCCTCTCCAGTGTTACCCAGGGTATGGAGAGTGCTTATGTGTCTCCCAGTGGTTACCGCTTAGTCAGTGAGACAGAGTGGAATCTCCTGCAGAAAGAGGTTCATAATGCTGGAAATAAACTTGGGAGACGTTGTGATATGTGTTCCAATTATGAAAAACAATTACAAGGAATTCAGATTCAGGAGGCTGAAACAAGAGACCAGGTAAAAAAACTTCAGGTGATGCTAAGGCAAGCTAATGATCAGCTAGAGAAGACAATGAAAGATAAACAGGAGCTAGAAGACTTCATCAAGAAGAGCACTGAGGACTCCAGCCATCAGATCTCTGCACTTGTCGTAAGAGCCCAGGCTTCCGAGATCTTACTTGAAGAGTTACAACAGAGTTTTTCCCAAGCAAAGAGGGATGTTCAGGAACAGATGGCGGTGCTGATGCAGTCACGGGAACAGGTTTCAGAAGAGCTGGTGCGATTACAGAAAGACAATGATAGCCTCCAGGGAAAACATAATTTGCACATATCGTTACAGCAAGCAGAAGACTTCATCCTCCCAGATACTATAGAGGTGCTCCGGGAGTTGATATTAAAATACCGTGAGAACATCATTCATGTGAGGACAGCAGCAGACCACATGGAAGAGAAGCTAAAGGCTGAAATACTTTTCCTAAAAGAACAGATTCAAGCAGAACAGTGTTTAAAAGAAAATCTTGAAGAAACTCTGCAGCTAGAAATAGAAAACTGCAAGGAGGAAATAGCTTCCATTTCTAGTCTGAAAGCTGAATTAGAAAGAATAAAAGTAGAAAAAGGACAGTTGGAGTCCACATTAAGAGAGAAGTCTCAGCAGCTTGAGAGTCTTCAGGAAATAAAGATCACTTTGGAAGAACAGTTAAAGAAAGAGACTGCTGCTAAGGTTTCTGTTGAACAACTGATGTTTGAAGAGAAGAACAAAGCTCAGAGGTTACAAACAGAATTAGATGTCAGTGAACAAGTCCAGAGAGATTTTGTAAAGCTTTCTCAGACCCTACAGGTGCAGTTAGAGCGAATTCGGCAAGCAGACTCCTTGGAGAGAATCCGGGCAATTCTGAATGATACCAAACTGACAGACATTAACCAGCTACCCGAGACATGA

Related Sequences

XP_004857390.1 Protein

Rabep1 PREDICTED: rab GTPase-binding effector protein 1 [Heterocephalus glaber]

Length: 862 aa      View alignments
>XP_004857390.1
MAQPGPAPQPDVSLQQRVAELEKINAEFLRAQQQLEQEFNQKRAKFKELYLAKEEDLKRQNAVLQAAQDDLGHLRTQLWEAQAEMENIKAIATVSENTKQEAIDEVKRQWREEVASLQAVMKETVRDYEHQFHLRLEQERTQWAQYRESSEREIADLRRMLSEGQEEENLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELEASKVKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAEKLRKELHEVCHLLEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQRMEIVLTSEQLRQVEELKKKDQEDDEQQKLNKRKDHKKTDIEEELKVPVVCALTQEESSVHLSNEEEHVDSTHGSVHSLDADLLLPSVDPFSKSDNDMFKDGLRRAQSTDSLGTSGSLQSKALGHNFKAKSAGNLDESDFGPLVGADSVSENFDTASLGSLQMPSGFMLTKDQERAIKAMTPEQEETASLLSSVTQGMESAYVSPSGYRLVSETEWNLLQKEVHNAGNKLGRRCDMCSNYEKQLQGIQIQEAETRDQVKKLQVMLRQANDQLEKTMKDKQELEDFIKKSTEDSSHQISALVVRAQASEILLEELQQSFSQAKRDVQEQMAVLMQSREQVSEELVRLQKDNDSLQGKHNLHISLQQAEDFILPDTIEVLRELILKYRENIIHVRTAADHMEEKLKAEILFLKEQIQAEQCLKENLEETLQLEIENCKEEIASISSLKAELERIKVEKGQLESTLREKSQQLESLQEIKITLEEQLKKETAAKVSVEQLMFEEKNKAQRLQTELDVSEQVQRDFVKLSQTLQVQLERIRQADSLERIRAILNDTKLTDINQLPET