Details from NCBI annotation

Gene Symbol Pfn1
Gene Name profilin 1, transcript variant X2
Entrez Gene ID 101719532

Database interlinks

Part of NW_004624786.1 (Scaffold)

For more information consult the page for NW_004624786.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PFN1 ENSCPOG00000013136 (Guinea pig)

Gene Details

profilin 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000011825, Guinea pig)

Protein Percentage 92.14%
CDS Percentage 94.52%
Ka/Ks Ratio 0.30092 (Ka = 0.0369, Ks = 0.1227)

PFN1 ENSG00000108518 (Human)

Gene Details

profilin 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000225655, Human)

Protein Percentage 90.71%
CDS Percentage 91.9%
Ka/Ks Ratio 0.19433 (Ka = 0.0459, Ks = 0.236)

Pfn1 ENSMUSG00000018293 (Mouse)

Gene Details

profilin 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000018437, Mouse)

Protein Percentage 92.14%
CDS Percentage 90.71%
Ka/Ks Ratio 0.13017 (Ka = 0.0407, Ks = 0.3128)

Mk1 ENSRNOG00000019657 (Rat)

Gene Details

Mk1 protein (Mk1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000026601, Rat)

Protein Percentage 47.2%
CDS Percentage 58.67%
Ka/Ks Ratio 0.47272 (Ka = 0.5366, Ks = 1.1351)

Genome Location

Sequence Coding sequence

Length: 423 bp    Location: 8805957..8803112   Strand: -
>XM_004857307.1
ATGGCCGGGTGGAACGCCTACATCGACAACCTCATGGCGGACGGGACCTGTCAGGACGCGGCCATCGTGGGCTACAAGGACTCGCCTTCCGTGTGGGCCGCCGTCCCCGGGAAAACCTTCGCCAACGTCACGCCAGCTGAAGTCGGTGTCCTGGTTGGAAAAGACCGGTCAAGTTTTTTTGTAAATGGGCTGACACTTGGGGGCCAGAAATGTTCTGTGATCCGGGACTCACTGCTACTGGATGGGGAATTTACCATGGATCTTCGTACCAAGAGCACTGGTGGAGCCCCTACGTTCAACATCTCTGTTACCATGACTGCCAAGACGCTAGTCCTGCTGATGGGCAAAGAAGGTGTCCATGGTGGTACAGTCAACAAGAAATGTTATGAAATGGCTACCCACCTGCGGCGTGCCCAGTACTGA

Related Sequences

XP_004857364.1 Protein

Pfn1 PREDICTED: profilin-1 isoform X2 [Heterocephalus glaber]

Length: 140 aa      View alignments
>XP_004857364.1
MAGWNAYIDNLMADGTCQDAAIVGYKDSPSVWAAVPGKTFANVTPAEVGVLVGKDRSSFFVNGLTLGGQKCSVIRDSLLLDGEFTMDLRTKSTGGAPTFNISVTMTAKTLVLLMGKEGVHGGTVNKKCYEMATHLRRAQY