Details from NCBI annotation

Gene Symbol Chrne
Gene Name cholinergic receptor, nicotinic, epsilon (muscle)
Entrez Gene ID 101716770

Database interlinks

Part of NW_004624786.1 (Scaffold)

For more information consult the page for NW_004624786.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CHRNE ENSCPOG00000024620 (Guinea pig)

Gene Details

cholinergic receptor, nicotinic, epsilon (muscle)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000019443, Guinea pig)

Protein Percentage 87.83%
CDS Percentage 87.22%
Ka/Ks Ratio 0.09887 (Ka = 0.0599, Ks = 0.6056)

CHRNE ENSG00000108556 (Human)

Gene Details

cholinergic receptor, nicotinic, epsilon (muscle)

External Links

Gene Match (Ensembl Protein ID: ENSP00000293780, Human)

Protein Percentage 85.19%
CDS Percentage 86.0%
Ka/Ks Ratio 0.12254 (Ka = 0.074, Ks = 0.6037)

Chrne ENSMUSG00000014609 (Mouse)

Gene Details

cholinergic receptor, nicotinic, epsilon polypeptide

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000099616, Mouse)

Protein Percentage 86.61%
CDS Percentage 82.69%
Ka/Ks Ratio 0.08785 (Ka = 0.0736, Ks = 0.8382)

Chrne ENSRNOG00000003777 (Rat)

Gene Details

cholinergic receptor, nicotinic, epsilon (muscle) (Chrne), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000005050, Rat)

Protein Percentage 85.8%
CDS Percentage 82.15%
Ka/Ks Ratio 0.09444 (Ka = 0.0801, Ks = 0.8482)

Genome Location

Sequence Coding sequence

Length: 1482 bp    Location: 8769700..8764966   Strand: -
>XM_004857296.1
ATGACAGGGGCTTTGCTCGGTGCCCTGCTCCTCCTGGGGCTCCTTGGCAGAGGTGAGGGGAAGAATGAGGAGCTGAGTCTTTATCACCATCTTTTCAACAACTATGACCCAGAGTGCCGGCCTGTGAGGGGGCCTGAGGACACTGTCACCGTCAGCCTCAAGGTCACCCTGACCAACCTCATCTCACTGAATGAGAAGAAGGAGACTCTCACTACCAATGTATGGATTGGAATCGACTGGTATGATTACCGACTTAACTACAGCAAGGACGACTTTGGGGGCCTAGGAACCCTCCGGGTCCCTTCCGACCGCGTATGGCTACCAGACATTGTGCTGGAAAACAATATTGATGGCCAGTTCGGCGTGGCCTACGATGCCAACGTGCTGATCTGCGAGGGAGGCCACGTGTCCTGGTTGCCTCCAGCGATCTACCGGAGCACCTGCGCCGTGGAAGTAACCTACTTCCCCTTCGACTGGCAGAACTGCTCGCTCATTTTCCGCTCTCAGACTTACAGTGCCAAAGAAGTGGAGTTCATCTTTGACGTGGGCGACGATGGCGAAACCATCAACAAGATCGAAATCGACACCGAAGCCTTTACTGAGAACGGCGAGTGGGCCATCGACTTCTGCCCGGGGGTGATCCGCCACCAAGACCGTGGCTCCGCAGACCACCCCGGAGAAACTGATGTCGTCTACACGCTCATCATCCGCCGGAAACCGCTGTTCTACGTCATTAACATCATCGTACCTTGCGTGCTCATTTCAGGCCTGGTGGTGCTGGCCTACTTCCTGCCCGCACAGGCTGGTGGCCAGAAATGCACTGTCTCCATCAACGTCCTGCTGGCCCAGACTGTCTTCCTGTTCCTAATTGCTCAGAAAATCCCAGAGACATCTCTGAGCATGCCGCTGCTGGGCAAGTATCTCCTTTTCGTCATGGTGGTCGCCACACTCATAGTCATGAATTGCGTCATTGTGCTCAATGTGTCTCTGCGGACGCCCACCACTCATGCTACATCCCCGAGGCTGCGCCACGTTTTATTGGAGCTGCTGCCCCGCCTCCTGGGGTTGGGACCGCCCTCTGAGGCTTCCCAAACCGCCGCGTCCCCTAGGCGGGCGTCCTCCGTGGGCATCCTGCTCCGTGCAGAAGAGCTGATTATGAAAAAGCCACGGAGCGAGCTCGTGTTTGAAGGGCAGAGGCACCGGCACGGGACCTGGACAGCTGCCCTCTGCCAGAGCCTAAGCGCCGCAGCCCCCGAGATCCGCTACTGTGTGGATGCTATGAACTTTGTGGCTGACAGCACGCGAGAGCAGGAGACAATCGGCGAGGAGGCGTCGGACTGGGTGCGCATGGGGAAGGCCCTTGACAACGTCTGCTTCTGGGCTGCTCTGGTGCTCTTCAGTGTAGGTTCCAGCCTCATCTTCCTGGGGGCCTACTTCAACCAAGTGCCGGATCTCCCCTACCCGCCATGTATCCAACCTTGA

Related Sequences

XP_004857353.1 Protein

Chrne PREDICTED: acetylcholine receptor subunit epsilon [Heterocephalus glaber]

Length: 493 aa      View alignments
>XP_004857353.1
MTGALLGALLLLGLLGRGEGKNEELSLYHHLFNNYDPECRPVRGPEDTVTVSLKVTLTNLISLNEKKETLTTNVWIGIDWYDYRLNYSKDDFGGLGTLRVPSDRVWLPDIVLENNIDGQFGVAYDANVLICEGGHVSWLPPAIYRSTCAVEVTYFPFDWQNCSLIFRSQTYSAKEVEFIFDVGDDGETINKIEIDTEAFTENGEWAIDFCPGVIRHQDRGSADHPGETDVVYTLIIRRKPLFYVINIIVPCVLISGLVVLAYFLPAQAGGQKCTVSINVLLAQTVFLFLIAQKIPETSLSMPLLGKYLLFVMVVATLIVMNCVIVLNVSLRTPTTHATSPRLRHVLLELLPRLLGLGPPSEASQTAASPRRASSVGILLRAEELIMKKPRSELVFEGQRHRHGTWTAALCQSLSAAAPEIRYCVDAMNFVADSTREQETIGEEASDWVRMGKALDNVCFWAALVLFSVGSSLIFLGAYFNQVPDLPYPPCIQP