Sequence details NCBI ID: XM_004857281.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Psmb6
Gene Name proteasome (prosome, macropain) subunit, beta type, 6, transcript variant X1
Entrez Gene ID 101712906

Database interlinks

Part of NW_004624786.1 (Scaffold)

For more information consult the page for NW_004624786.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ENSCPOG00000001458 (Guinea pig)

Gene Details

Proteasome subunit beta type

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000001317, Guinea pig)

Protein Percentage 95.82%
CDS Percentage 93.31%
Ka/Ks Ratio 0.09603 (Ka = 0.0204, Ks = 0.2128)

Genome Location

Sequence Coding sequence

Length: 720 bp    Location: 8679460..8681580   Strand: +
Raw sequence   
>XM_004857281.1
ATGGCGGCTACCTTGCTAACTGCTCGAGGAGCGGGACCTGCACCCTGCTGGGGGCCACAGGCCATCACCCCAGACTGGGAAAACCGAGAAGTCTCCACAGGGACCACGATCATGGCTGTGCAGTTTGACGGGGGCGTGGTTCTAGGGGCGGACTCCAGAACAACCACTGGGTCCTACATTGCCAATCGAGTGACTGACAAGCTGACTCCTATTCATGACCGAATTTTCTGCTGTCGCTCAGGTTCAGCAGCTGATACCCAGGCAGTGGCAGATGCTGTCACTTATCAGCTTGGTTTCCACAGCATTGAGTTGAATGAGCCTCCGCTGGTACACACAGCAGCCAGCCTATTTAAGGAGATGTGTTACCGATACCGGGAAGATCTGATGGCAGGAATCATCGTCGCAGGCTGGGACCCTCAAGAAGGAGGGCAGGTCTACTCAGTTCCCATGGGAGGTATGATGGTAAGGCAGTCCTTTGCCATTGGAGGTTCCGGGAGTTCCTATATCTATGGCTATGTTGATGCTACCTATCGGAAAGGCATGACCAAGGACGAGTGCCTACAATTCACTGCCAATGCTCTTGCTTTGGCCATGGAGCGGGATGGTTCCAGTGGAGGGGTGATCCGCCTGGCAGCTATTGAAGAATCAGGGGTTGAGCGGCAGGTACTTTTGGGTGACCAGATACCCAAATTCACTATTGCCACTTTACCACCCCCCTGA

Related Sequences

XP_004857338.1 Protein

Psmb6 PREDICTED: proteasome subunit beta type-6 isoform X1 [Heterocephalus glaber]

Length: 239 aa      
>XP_004857338.1
MAATLLTARGAGPAPCWGPQAITPDWENREVSTGTTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPIHDRIFCCRSGSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGIIVAGWDPQEGGQVYSVPMGGMMVRQSFAIGGSGSSYIYGYVDATYRKGMTKDECLQFTANALALAMERDGSSGGVIRLAAIEESGVERQVLLGDQIPKFTIATLPPP