Details from NCBI annotation

Gene Symbol Wscd1
Gene Name WSC domain containing 1, transcript variant X4
Entrez Gene ID 101708249

Database interlinks

Part of NW_004624786.1 (Scaffold)

For more information consult the page for NW_004624786.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

WSCD1 ENSCPOG00000005766 (Guinea pig)

Gene Details

WSC domain containing 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000005199, Guinea pig)

Protein Percentage 92.13%
CDS Percentage 90.62%
Ka/Ks Ratio 0.10293 (Ka = 0.0378, Ks = 0.3673)

WSCD1 ENSG00000179314 (Human)

Gene Details

WSC domain containing 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000460825, Human)

Protein Percentage 86.54%
CDS Percentage 85.55%
Ka/Ks Ratio 0.11229 (Ka = 0.0721, Ks = 0.6417)

Wscd1 ENSMUSG00000020811 (Mouse)

Gene Details

WSC domain containing 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000104150, Mouse)

Protein Percentage 86.01%
CDS Percentage 83.74%
Ka/Ks Ratio 0.09431 (Ka = 0.0717, Ks = 0.7606)

Wscd1 ENSRNOG00000007869 (Rat)

Gene Details

WSC domain containing 1 (Wscd1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000010358, Rat)

Protein Percentage 85.31%
CDS Percentage 84.32%
Ka/Ks Ratio 0.11444 (Ka = 0.0764, Ks = 0.6679)

Genome Location

Sequence Coding sequence

Length: 1719 bp    Location: 7933241..7892790   Strand: -
>XM_004857269.1
ATGGCCAAACCTTTCTTCAGACTCCAGAAGTTTCTCCGCAGGACGCAGTTTCTGCTGCTCTTCCTCACGGCTGCCTATTTGATGACCGGCACCTTGCTGCTACTGCAGCGGGCCCGAATGGCCCTCCCTCAGGGCCCCCGGGCACCTGGCACCCTGCAGGCCTTGCCAGTGGCCACTGTGGCACCGGGCATGGGCCTGCTGGACAGCAGAGCTCTCCAGGACTCCCAGGTCAGCCCAGACCTGCTGCTCGATGTGGACATGTTGCAGAGCCCTCTGGCCCGGCTCCCACCTGGACTCCGCTGGCCCCGGAGGAACCGCAGCTCAGTTCGGCGCCGCTGGTTCCACCGCTTTGTGAGTGATCCACATGGGTCACCCACCCTGGGTCCTGAGGCCCCCAGGCCAGCCACACACAGCCAAGGCACCTATGTTGGATGCTTCAGTGACGAAGGCCAGGAGAGAACTCTGAAGGGGGCAGTGTTCTATGACTTGAGGAAGATGACGGTTGCCCATTGCCAGGATGCGTGTGCTGAGCGGTCCTACGTGTATGCTGGCTTGGAGGCTGGGGCAGAGTGCTACTGCGGGAACCGGCTGCCAACTGCACGCATCGGGCTGAATGAGTGCAACCTTGAGTGTAAGGGCGAGAAGGGCGCTGTGTGTGGGGCCGTGGGCCGGCTCTCCGTGTACCGCGTGGACATGCTGCAGACAGGCACCAGCAAGCGGCGGACTGCCACCTACCGCGGGTGTTTCCAGCTGCCAGAGAATGCCACACACACCTTCCCCACCTCCCTGATACAGGCCAACATGACTGTGGAGATGTGCTCAGGATTTTGTTCCCAGAAAGAGTTCCCCTTGGCCGTCCTGCGGGGCTGGGAGTGCTACTGTGCCTACTCAACCCCCCAGTTCAACCTGCGGGATGCTGTGGACAGCGCACTGTGTGGCCCCACCCCTGAGCCACAGAGGACAGCTCGTTACTGCAAGGTCTACCAGACTCCTGTGCAAGACACACGGTGTACAGACAGGAGGTTTCTTCCCAGCAAATCCAAGGTATTTGTGGCTTTATCAAGCTTCCCAGGAGCCGGGAACACGTGGGCACGGCACCTCATTGAGCATGCCACAGGATTCTACACAGGGAGCTACTACTTCGATGGAACACTGTACAACAAAGGGTTCAAGGGTGAGAAGGACCACTGGCGGAGCCGGCGCACCATCTGCGTGAAGACCCATGAGAGCGGCAAGAGGGAGATTGAGATGTTCGACTCAGCCATTCTGCTGATCCGGAACCCCTACAGGTCCCTGGTGGCTGAATTCAACAGAAAATGTGCCGGGCACCTGGGTTATGCTCCCGACCACAACTGGAAGAGCAAAGAGTGGCCAGACTTCGTGAACAGTTATGCGTCATGGTGGTCCTCGCATGTGCTGGACTGGCTGAAGTATGGGAAGCGGCTGCTGGTGGTGCACTATGAAGAGCTGCGCCGCAGCCTGGTCCCCACACTGCGGGAGATGGTGGCCTTCCTCAATGTGTCTGTGAGTGAGGATCGGCTGCTCTGTGTGGAGAACAACAAGGAAGGCAGCTTCCGGCGGCATGGCCAGCGCCCACATGACCCAGAACCCTTCACTCCCGAGATGAAAGACCTGATCAATGGCTATATCCGGACAGTGGACCAGGCCTTGCGTGACCACAACTGGGCCGGACTGCCCAGGGAGTATGTGCCCAGATGA

Related Sequences

XP_004857326.1 Protein

Wscd1 PREDICTED: WSC domain-containing protein 1 isoform X4 [Heterocephalus glaber]

Length: 572 aa      View alignments
>XP_004857326.1
MAKPFFRLQKFLRRTQFLLLFLTAAYLMTGTLLLLQRARMALPQGPRAPGTLQALPVATVAPGMGLLDSRALQDSQVSPDLLLDVDMLQSPLARLPPGLRWPRRNRSSVRRRWFHRFVSDPHGSPTLGPEAPRPATHSQGTYVGCFSDEGQERTLKGAVFYDLRKMTVAHCQDACAERSYVYAGLEAGAECYCGNRLPTARIGLNECNLECKGEKGAVCGAVGRLSVYRVDMLQTGTSKRRTATYRGCFQLPENATHTFPTSLIQANMTVEMCSGFCSQKEFPLAVLRGWECYCAYSTPQFNLRDAVDSALCGPTPEPQRTARYCKVYQTPVQDTRCTDRRFLPSKSKVFVALSSFPGAGNTWARHLIEHATGFYTGSYYFDGTLYNKGFKGEKDHWRSRRTICVKTHESGKREIEMFDSAILLIRNPYRSLVAEFNRKCAGHLGYAPDHNWKSKEWPDFVNSYASWWSSHVLDWLKYGKRLLVVHYEELRRSLVPTLREMVAFLNVSVSEDRLLCVENNKEGSFRRHGQRPHDPEPFTPEMKDLINGYIRTVDQALRDHNWAGLPREYVPR