Details from NCBI annotation

Gene Symbol Slc13a5
Gene Name solute carrier family 13 (sodium-dependent citrate transporter), member 5, transcript variant X1
Entrez Gene ID 101704737

Database interlinks

Part of NW_004624786.1 (Scaffold)

For more information consult the page for NW_004624786.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SLC13A5 ENSCPOG00000002889 (Guinea pig)

Gene Details

solute carrier family 13 (sodium-dependent citrate transporter), member 5

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000002625, Guinea pig)

Protein Percentage 93.7%
CDS Percentage 92.18%
Ka/Ks Ratio 0.12309 (Ka = 0.0321, Ks = 0.2611)

SLC13A5 ENSG00000141485 (Human)

Gene Details

solute carrier family 13 (sodium-dependent citrate transporter), member 5

External Links

Gene Match (Ensembl Protein ID: ENSP00000406220, Human)

Protein Percentage 84.68%
CDS Percentage 87.44%
Ka/Ks Ratio 0.22347 (Ka = 0.0831, Ks = 0.3717)

Slc13a5 ENSMUSG00000020805 (Mouse)

Gene Details

solute carrier family 13 (sodium-dependent citrate transporter), member 5

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000021161, Mouse)

Protein Percentage 75.66%
CDS Percentage 80.21%
Ka/Ks Ratio 0.26368 (Ka = 0.1561, Ks = 0.5918)

Slc13a5 ENSRNOG00000014870 (Rat)

Gene Details

solute carrier family 13 (sodium-dependent citrate transporter), member 5 (Slc13a5), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000020043, Rat)

Protein Percentage 77.41%
CDS Percentage 81.2%
Ka/Ks Ratio 0.25321 (Ka = 0.143, Ks = 0.5649)

Genome Location

Sequence Coding sequence

Length: 1716 bp    Location: 7322204..7357287   Strand: +
>XM_004857257.1
ATGGCTTCGGCGCTGAGCTATATCTCCAAGTTCAAGTCCTTCGTGATCTTGTTCGTCAGCCCGCTCCTGCTGCTGCCACTCATCATTCTGATACCCGCCAAGTTTGTCAGGTGTGCCTACATCATCATCATCATGGCCATTTACTGGTGCACAGATGTCATCCCAGTGGCTGTCACCTCCCTCATGCCTGTTTTGCTCTTTCCACTGTTTCAGATACTGGACTCCAAAGAGGTATGTGTCCAGTACATGAAGGACACCAACATGCTGTTCCTGGGCAGCCTCATTGTGGCAGTGGCCGTGGAGCGCTGGAACCTGCACAAGAGGATCGCGCTTCGCACGCTGCTCTGGGTGGGAGCCAAGCCTGCACGGCTGATGCTGGGCTTCATGGTGGTCACAGCCTTCCTGTCCATGTGGATCAGCAACACAGCCACCACCGCCATGATGGTGCCCATTGTAGAGGCCGTGCTGCAGCAGATGGAAGCCACAAACGCAGCCTCTGAGACCAGACTTGGGGCATTGGAGCTAGTGGACAAGGGTAAGGCTGGACAATTGCCAGAGACCCAAGTGACTTTTGGAGGCCCCACCATGGAGAAGCAGGAGGACCAGGAAAGGAAGAACATGTGCAAGGCTATGAGCCTGTGTGTGTGCTATGCAGCCAGCATCGGGGGCACCGCCACCCTGACTGGGACGGGACCCAACGTGGTGCTCCTGGGCCAGATGAATGAACTGTTTCCTGACAGCAAGGATCTGTTGAACTTTGCTTCTTGGTTTGGATTTGCCTTCCCCAACATGCTGCTGATGCTGCTACTTTCCTGGCTGTGGCTCCAGTGCATTTATATGAAATGCAATTTTAAAAAATCCTGCAGCTGTGGGATACAGAGTAGGAATAAGGAGAAGGCTGCCTATGGAGTGATACAGGAGGAGTACAGCAAGCTGGGACCCTTGTCCTTCGCTGAGGTCAACGTCCTGGTCTGCTTCCTCCTGCTGATTGGCCTGTGGTTCTCCCGAGATCCTGGTTTCATGCCAGGCTGGGTGTCCATTGCCTGGGTGGAGGATAAGAAAATGTATGCCACTGATGCCACTGTGGCTATCTTTGTGGCCATCTTGCTATTCATTGTACCTTCACAGAAGCCCAAGTTCAACTTTTGCAGCCAGACTGAGGAAGAAATGAAAACTCCATTTTATCCCCCAGCACTGTTGGACTGGAAAGTAACTCAGGAAAAAGTGCCCTGGGGTGTTGTGCTGCTACTAGGGGGTGGATTTGCTCTGGCTAAAGGATGTGAGGCCTCAGGGCTCTCAGAGTGGATGGGGAAGCAGATGGAGCCTTTGAGCAGTGTGTCCCCAGCAGCCATCACCTTGATCTTATCCTTGCTTATTGCTGTGACCACTGAATGCACAAGCAACGTGGCCACCACCACCCTATTCTTACCCATCTTTGCCTCCATGTCTCGTTCCATCGGCCTCAATCCGCTGTACGTCATGCTCCCCTGTACCCTGAGTGCATCCTTTGCCTTCATGTTACCTGTGGCCACCCCGCCTAATGCCATCGTGTTTGCCTACGGACACCTCAAAGTTTCTGACATGGTGAAAACAGGACTTATGATGAATGTAATTGGAGTCTTGTGTGTGTTTTTGTCTGTCAACACCTGGGGACGGGTCATATTTGACTTGGATCATTTCCCTGACTGGGCTAATGTGACACATATTAAGACTTAG

Related Sequences

XP_004857314.1 Protein

Slc13a5 PREDICTED: solute carrier family 13 member 5 isoform X1 [Heterocephalus glaber]

Length: 571 aa      View alignments
>XP_004857314.1
MASALSYISKFKSFVILFVSPLLLLPLIILIPAKFVRCAYIIIIMAIYWCTDVIPVAVTSLMPVLLFPLFQILDSKEVCVQYMKDTNMLFLGSLIVAVAVERWNLHKRIALRTLLWVGAKPARLMLGFMVVTAFLSMWISNTATTAMMVPIVEAVLQQMEATNAASETRLGALELVDKGKAGQLPETQVTFGGPTMEKQEDQERKNMCKAMSLCVCYAASIGGTATLTGTGPNVVLLGQMNELFPDSKDLLNFASWFGFAFPNMLLMLLLSWLWLQCIYMKCNFKKSCSCGIQSRNKEKAAYGVIQEEYSKLGPLSFAEVNVLVCFLLLIGLWFSRDPGFMPGWVSIAWVEDKKMYATDATVAIFVAILLFIVPSQKPKFNFCSQTEEEMKTPFYPPALLDWKVTQEKVPWGVVLLLGGGFALAKGCEASGLSEWMGKQMEPLSSVSPAAITLILSLLIAVTTECTSNVATTTLFLPIFASMSRSIGLNPLYVMLPCTLSASFAFMLPVATPPNAIVFAYGHLKVSDMVKTGLMMNVIGVLCVFLSVNTWGRVIFDLDHFPDWANVTHIKT