Sequence details NCBI ID: XM_004857232.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Atp2a3
Gene Name ATPase, Ca++ transporting, ubiquitous, transcript variant X1
Entrez Gene ID 101726683

Database interlinks

Part of NW_004624786.1 (Scaffold)

For more information consult the page for NW_004624786.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ATP2A3 ENSCPOG00000007460 (Guinea pig)

Gene Details

ATPase, Ca++ transporting, ubiquitous

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000006728, Guinea pig)

Protein Percentage 93.57%
CDS Percentage 91.33%
Ka/Ks Ratio 0.10007 (Ka = 0.0341, Ks = 0.3408)

ATP2A3 ENSG00000074370 (Human)

Gene Details

ATPase, Ca++ transporting, ubiquitous

External Links

Gene Match (Ensembl Protein ID: ENSP00000353072, Human)

Protein Percentage 91.66%
CDS Percentage 88.91%
Ka/Ks Ratio 0.08357 (Ka = 0.0448, Ks = 0.5363)

Atp2a3 ENSMUSG00000020788 (Mouse)

Gene Details

ATPase, Ca++ transporting, ubiquitous

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000021142, Mouse)

Protein Percentage 92.87%
CDS Percentage 87.57%
Ka/Ks Ratio 0.0602 (Ka = 0.0364, Ks = 0.6042)

Atp2a3 ENSRNOG00000017912 (Rat)

Gene Details

ATPase, Ca++ transporting, ubiquitous (Atp2a3), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000060212, Rat)

Protein Percentage 91.13%
CDS Percentage 86.47%
Ka/Ks Ratio 0.08227 (Ka = 0.0509, Ks = 0.6181)

Genome Location

Sequence Coding sequence

Length: 3132 bp    Location: 6558547..6528182   Strand: -
Raw sequence   
>XM_004857232.1
ATGGAGGAGGCGTACCTGCTCCCGGTCGCCGACGTGTTGCGCCGCTTCTCGGTGACAGCCGAGGGCGGCCTCAGTCCGGAGCAGGTGACCAGCGCGCGGGAGCGCTACGGCCCCAACGAGCTCCCGACTGAGGAAGGGAAGTCCCTGTGGGAGCTGGTGCTGGAGCAGTTTGATGACCTCCTGGTGCGCATCCTGCTGCTGGCCGCCCTGGTCTCCTTTGTCCTGGCCTGGTTCGAGGAGGGTGAGGAGATCACGACAGCCTTCGTGGAGCCCCTGGTCATCATGCTGATCCTCGTGGCCAATGCCATCGTGGGCGTGTGGCAGGAACGCAATGCTGAGAGTGCCATTGAGGCCTTGAAGGAGTATGAGCCTGAGATGGGCAAGGTGATCCGCTCAGACCGGAAGGGCGTGCAGAGGATCCGTGCCCGGGACATCGTCCCTGGGGACATTGTAGAAGTGGCAGTGGGAGACAAAGTGCCTGCCGACCTCCGCCTCATCGAGATCAAGTCCACCACGTTACGAGTGGACCAGTCCATCCTGACGGGTGAGTCTGTGTCTGTGACCAAGCACAGGGATGTGATCCCGGACCCCAGAGCTGTGAACCAGGACAAGAAGAACATGCTGTTTTCTGGCACCAATATTGCATCAGGCAAAGCAGTGGGCGTGGCAGTGGCCACCGGTCTGCACACGGAGCTTGGCAAGATCCGGAGCCAGATGGCAGCCGTGGAGCCTGAGCGGACACCACTGCAGCGCAAGCTGGATGAGTTTGGGCGTCAGCTGTCCCATGCCATCTCCGTGATCTGTGTGGCCGTGTGGGTCATCAACATTGGCCACTTCTCTGACCCAGCCCATGGGGGCTCCTGGCTCCGAGGTGCCGTCTACTACTTTAAGATTGCAGTGGCCCTGGCAGTGGCAGCCATTCCCGAGGGCCTCCCAGCAGTCATCACTACATGCCTGGCACTGGGTACGAGGCGCATGGCACGGAAGAATGCCATTGTGCGGAGCCTGCCCTCTGTGGAGACCCTGGGCTGCACCTCAGTCATCTGCTCTGACAAGACAGGCACGCTCACCACCAACCAGATGTCTGTCTGCAGGATGTTCGTGGTAGCTGAAGCAAAAGCGGCCTCCTGCCGACTGCACGAATTCACCATCTCGGGTACCACATACACTCCAGAGGGTGAAGTGCAGCAGGGGGAGCAGCCCGTGCGCTGCGGGCAGTTCGATGGGCTGGTGGAGCTGGCGACGATCTGTGCCCTGTGCAACGACTCCGCTCTGGACTACAATGAGGCCAAGGCTGTATATGAGAAGGTGGGAGAGGCCACGGAAACGGCGCTGACTTGCCTGGTGGAGAAGATGAATGTGTTCGACATGGACCTAAAGACCCTGTCCCGGGTGGAGCGAGCTGGTGCCTGCAATGCGGTAATCAAGCAGCTTATGAAGAAAGAGTTCACCCTCGAGTTTTCCCGGGACCGGAAGTCCATGTCGGTGTACTGCACGCCCACCTGCCCTGACCCCAAGACCCAGGGCAGCAAGATGTTTGTGAAGGGGGCTCCTGAGAGTGTGCTGGAGCGCTGCAGCTCAGTCCGTGTCGGGAGCCGCACAGCACCCCTGAACACTGCCTCCAGGGAGCAGATCCTGGCAAAGATCCGAGACTGGGGCTCGGGCTCAGACACGCTGCGCTGCCTAGCACTGGCCACCCAGGATGCGCCGCCCAGGAAGGAGGACATGCAGCTGGATGACTCCAGCAAGTTTGCACAGTACGAGACAAACCTGACCTTCGTGGGCTGTGTGGGAATGCTGGACCCACCCCGGCCTGAGGTGGCTGCCTGCATCACACGCTGCCACCGGGCAGGCATTCGTGTGGTCATGATCACAGGGGACAACAAAGGCACAGCTGTGGCCATCTGCCGCCGGCTGGGCATCTTCGAGGACTCCGAGGATGTGGTGGGCAAGGCCTACACGGGCCGAGAATTCGATGACCTTAGCCCTGAACAGCAGCGCCATGCCTGCTGCACTGCCCGCTGCTTCGCCCGTGTGGAGCCCGCACACAAGTCCCGAATCGTGGAGTACCTGCAGTCCTTCAGCGAGATCACCGCCATGACTGGTGATGGGGTGAACGATGCACCAGCTCTGAAGAAAGCAGAGATTGGCATTGCCATGGGCTCTGGCACAGCTGTGGCCAAGTCAGCAGCAGAGATGGTACTGTCAGATGACAACTTTGCCTCCATCGTTGCTGCGGTGGAAGAGGGCCGGGCCATCTACAGCAACATGAAGCAGTTCATCCGTTACCTCATCTCCTCGAATGTCGGCGAGGTGGTCTGCATCTTCCTCACGGCAATTCTGGGCCTGCCTGAAGCCCTGATCCCCGTGCAGCTGCTCTGGGTGAACCTGGTGACAGATGGCTTGCCTGCCACAGCCCTTGGCTTCAATCCTCCAGACCTGGACATCATGGAGAAGCTGCCCCGGAACCCTCATGAAGCCCTCATCAGTGGCTGGCTCTTTTTCCGATATCTGGCTATTGGAGTGTACGTGGGCCTGGGCACAGTGGCTGCTGCCACCTGGTGGTTCCTGTATGATGCCGAAGGACCACAAGTCACCTTCTACCAGTTGAGGAACTTCCTGAAGTGCTCTGAAGACAACCCGCTCTTTGCTGGAGTCAACTGTGAGGTCTTCGAGTCCCACTTCCCCACAACCATGGCCTTGTCTGTGCTTGTGACCATTGAAATGTGCAACGCCCTCAACAGTGTCTCGGAGAACCAGTCCCTGCTGCGGATGCCACCCTGGCTGAATCCCTGGCTGCTGGCCGCTGTGGCCATGTCCATGGCCCTGCACTTCCTCATCCTCCTCGTGCCGCCCCTGCCTCTCATTTTCCAGGTGACCCCGCTGAGTGGGCACCAGTGGGTGGTGGTGCTCCAGATATCCCTGCCCGTCATCCTGCTTGATGAGGCCCTCAAGTACCTGTCTCGGAATCACATGGAGGCCTGCCTTTATCCAGGCATTCTACAGACAGTCCTGCGGGCCTGGAGGAGGCAGCTGCTGACCACCTCCCGGACCCCAGACCACACCGGAAAAAAAGGACCAGAAGTGAATGCTGGGAACCGAGCGGAGTCTCCAGCAACAACCTCAGACTGA

Related Sequences

XP_004857289.1 Protein

Atp2a3 PREDICTED: sarcoplasmic/endoplasmic reticulum calcium ATPase 3 isoform X1 [Heterocephalus glaber]

Length: 1043 aa      View alignments
>XP_004857289.1
MEEAYLLPVADVLRRFSVTAEGGLSPEQVTSARERYGPNELPTEEGKSLWELVLEQFDDLLVRILLLAALVSFVLAWFEEGEEITTAFVEPLVIMLILVANAIVGVWQERNAESAIEALKEYEPEMGKVIRSDRKGVQRIRARDIVPGDIVEVAVGDKVPADLRLIEIKSTTLRVDQSILTGESVSVTKHRDVIPDPRAVNQDKKNMLFSGTNIASGKAVGVAVATGLHTELGKIRSQMAAVEPERTPLQRKLDEFGRQLSHAISVICVAVWVINIGHFSDPAHGGSWLRGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMARKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCRMFVVAEAKAASCRLHEFTISGTTYTPEGEVQQGEQPVRCGQFDGLVELATICALCNDSALDYNEAKAVYEKVGEATETALTCLVEKMNVFDMDLKTLSRVERAGACNAVIKQLMKKEFTLEFSRDRKSMSVYCTPTCPDPKTQGSKMFVKGAPESVLERCSSVRVGSRTAPLNTASREQILAKIRDWGSGSDTLRCLALATQDAPPRKEDMQLDDSSKFAQYETNLTFVGCVGMLDPPRPEVAACITRCHRAGIRVVMITGDNKGTAVAICRRLGIFEDSEDVVGKAYTGREFDDLSPEQQRHACCTARCFARVEPAHKSRIVEYLQSFSEITAMTGDGVNDAPALKKAEIGIAMGSGTAVAKSAAEMVLSDDNFASIVAAVEEGRAIYSNMKQFIRYLISSNVGEVVCIFLTAILGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMEKLPRNPHEALISGWLFFRYLAIGVYVGLGTVAAATWWFLYDAEGPQVTFYQLRNFLKCSEDNPLFAGVNCEVFESHFPTTMALSVLVTIEMCNALNSVSENQSLLRMPPWLNPWLLAAVAMSMALHFLILLVPPLPLIFQVTPLSGHQWVVVLQISLPVILLDEALKYLSRNHMEACLYPGILQTVLRAWRRQLLTTSRTPDHTGKKGPEVNAGNRAESPATTSD