Sequence details NCBI ID: XM_004857209.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Trpv3
Gene Name transient receptor potential cation channel, subfamily V, member 3
Entrez Gene ID 101719293

Database interlinks

Part of NW_004624786.1 (Scaffold)

For more information consult the page for NW_004624786.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TRPV3 ENSCPOG00000015148 (Guinea pig)

Gene Details

transient receptor potential cation channel, subfamily V, member 3

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000013657, Guinea pig)

Protein Percentage 94.79%
CDS Percentage 91.49%
Ka/Ks Ratio 0.07959 (Ka = 0.0287, Ks = 0.3607)

TRPV3 ENSG00000167723 (Human)

Gene Details

transient receptor potential cation channel, subfamily V, member 3

External Links

Gene Match (Ensembl Protein ID: ENSP00000301365, Human)

Protein Percentage 93.17%
CDS Percentage 89.51%
Ka/Ks Ratio 0.06053 (Ka = 0.0332, Ks = 0.5489)

Trpv3 ENSMUSG00000043029 (Mouse)

Gene Details

transient receptor potential cation channel, subfamily V, member 3

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000053755, Mouse)

Protein Percentage 93.93%
CDS Percentage 89.25%
Ka/Ks Ratio 0.05701 (Ka = 0.0309, Ks = 0.5428)

Trpv3 ENSRNOG00000019606 (Rat)

Gene Details

transient receptor potential cation channel, subfamily V, member 3 (Trpv3), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000026596, Rat)

Protein Percentage 94.06%
CDS Percentage 89.8%
Ka/Ks Ratio 0.06317 (Ka = 0.0308, Ks = 0.4879)

Genome Location

Sequence Coding sequence

Length: 2376 bp    Location: 6221887..6194638   Strand: -
Raw sequence   
>XM_004857209.1
ATGAATGCCCACCCCAAGGAGATGGTGCCCCTCATGGGCAGGAAAGTCAATGTCGCCAGTGGGAACCCTGCTGTTCTGACAGAAAAGAGGCCAGCAGAGGTCACTCCCACCAAGAAGAGCGCTCACTTCTTCCTGGAGATAGAAGGGTTTGAGCCCAACCCCACTATTACCAAGACCTCCCCGCCCATCTTCTCCAAGCCAATGGACTCCAATATCCGACAGTGCCTCTCTGGTAACTGTGAAGACATGGACTCCCCTCAGTCTCCTCAGGATGATGTGACTGAGACTCCTTCCAATCCCAACAGTCCAAGTGCAAACCAGGCCAAGGAAGAGCAGAGGCGGAAAAAGAAGCGGCTAAAAAAGTGCATCTTCACGGCTGTGTCTGAGGGCTGCGTGGAGGAGCTGGTAGAGCTGCTGGTGGAACTGCAAGAGCTTTGCAAACGTCGCTGTGGCCTGGATGTGTCGGACTTCCTCATGCACAAGCTGACAGCCTCAGACACAGGGAAGACCTGCCTGATGAAGGCCTTGCTAAACATCAACCCCAACACAAAGGAGATTGTGCGTATCCTGCTCACCTTTGCAGATGAGAACGACATCCTGGACCAATTCATCAATGCTGAGTACACTGAGGAGGCCTACGAAGGGCAGACGGCACTCAACATCGCCATCGAGCGGCGCCAAGGAGACATCGCCGCTGTGCTCATCGCGGCGGGTGCCGACGTCAACGCCCACGCCAAGGGGGTCTTCTTCAACCCCAAGTCCCAGCACGAAGGCTTCTACTTCGGTGAGACGCCCCTGGCCCTGGCGGCATGCACCAACCAACCTGAGATTGTGCAGCTGCTGATGGAGAATGAGCAGACGGACATCACTTCGCAGGACTCTCGGGGAAACAACATCCTGCATGCACTGGTGACGGTGGCTGAGGACTTCAAGACCCAGAATGACTTTGTAAAGCGCATGTATGACATGATCCTGCTAAGGAGTGGCAACTGGGAGCTGGAGACCATGCGCAACAATGATGGCCTCACACCGCTGCAACTGGCTGCCAAGATGGGCAAAGCCGAGATCCTGAAGTACATCCTCAGTCGTGAGATCAAGGAGAAACCGCTCCGGAGCCTATCCAGGAAGTTCACAGACTGGGCATATGGGCCTGTGTCATCCTCACTCTATGACCTCACCAATGTGGATACCACAACAGACAACTCTGTGCTGGAAATTATTGTCTACAACACCAACATTGATAACCGGCATGAGATGCTGACCCTGGAGCCCCTGCACACTCTGCTGCATATGAAGTGGAAGAAGTTTGCCAAGTACATGTTCTTCCTGTCCTTCTGCTTCTATTTCTTCTACAACATCACTCTGACTCTTGTCTCTTACTACCGGCCCCGGGAGAAAGAGGACCTCCCACACCCGTTGGCCCTGTCACACAAGATGGGGTGGCTTCAGCTCTTAGGAAGGATGTTTGTTCTCATCTGGGCAACATGCATCTCTGTGAAAGAGGGCATTGCGATCTTCCTGCTGAGACCCTCAGATCTGCAGTCCATCCTGTCGGATGCCTGGTTTCACTTCGTCTTTTTTATCCAAGCTGTGCTTGTGATACTGTCTGTCTTCTTGTACTTGTTTGCCTACAAAGAGTACCTCGCCTGCCTCGTGCTGGCCATGGCCCTGGGCTGGGCGAACATGCTCTACTACACACGCGGCTTCCAGTCCATGGGCATGTACAGCGTCATGATCCAGAAGGTCATTTTGCATGATGTTCTGAAGTTCTTGTTTGTATATATCGTGTTCTTACTTGGATTTGGAGTAGCCCTGGCCTCGCTGATTGAGAAGTGTTCCGATGACAGCGAGGACTGCAGCTCCTATGGCAGCTTCAGTGATGCCGTGCTGGAGCTCTTTAAGCTCACCATAGGCCTGGGCGACCTGAAAATCCAGCAGAACTCCACCTATCCCATCCTCTTTCTGTTCCTGCTCATCACCTATGTCATCCTCACCTTCGTCCTCCTCCTGAACATGCTCATTGCCCTGATGGGGGAGACCGTAGAGAACGTCTCCAAGGAGAGTGAGCGCATCTGGCGTTTGCAGAGAGCCAGGACAATCTTGGAGTTTGAGAAAATGTTACCAGAATGCCTGAGGAGCAGATTCCGGATGGGAGAGCTGTGCAAAGTAGCAGAGGATGACTTTCGTCTGTGTCTTCGGATCAATGAGGTGAAGTGGACTGAATGGAAAACACACGTCTCCTTCCTCAATGAAGATCCGGGGCCCATCAGACGGACAGTGGATTTCAACAAAATCCAAGACTCTTCCAGGAGCAATAGCAAAACGACCCTCAATGCATTTGAGGAAATAGATGAGTTTCCAGAAACTTCAGTGTAG

Related Sequences

XP_004857266.1 Protein

Trpv3 PREDICTED: transient receptor potential cation channel subfamily V member 3 [Heterocephalus glaber]

Length: 791 aa      View alignments
>XP_004857266.1
MNAHPKEMVPLMGRKVNVASGNPAVLTEKRPAEVTPTKKSAHFFLEIEGFEPNPTITKTSPPIFSKPMDSNIRQCLSGNCEDMDSPQSPQDDVTETPSNPNSPSANQAKEEQRRKKKRLKKCIFTAVSEGCVEELVELLVELQELCKRRCGLDVSDFLMHKLTASDTGKTCLMKALLNINPNTKEIVRILLTFADENDILDQFINAEYTEEAYEGQTALNIAIERRQGDIAAVLIAAGADVNAHAKGVFFNPKSQHEGFYFGETPLALAACTNQPEIVQLLMENEQTDITSQDSRGNNILHALVTVAEDFKTQNDFVKRMYDMILLRSGNWELETMRNNDGLTPLQLAAKMGKAEILKYILSREIKEKPLRSLSRKFTDWAYGPVSSSLYDLTNVDTTTDNSVLEIIVYNTNIDNRHEMLTLEPLHTLLHMKWKKFAKYMFFLSFCFYFFYNITLTLVSYYRPREKEDLPHPLALSHKMGWLQLLGRMFVLIWATCISVKEGIAIFLLRPSDLQSILSDAWFHFVFFIQAVLVILSVFLYLFAYKEYLACLVLAMALGWANMLYYTRGFQSMGMYSVMIQKVILHDVLKFLFVYIVFLLGFGVALASLIEKCSDDSEDCSSYGSFSDAVLELFKLTIGLGDLKIQQNSTYPILFLFLLITYVILTFVLLLNMLIALMGETVENVSKESERIWRLQRARTILEFEKMLPECLRSRFRMGELCKVAEDDFRLCLRINEVKWTEWKTHVSFLNEDPGPIRRTVDFNKIQDSSRSNSKTTLNAFEEIDEFPETSV