Details from NCBI annotation

Gene Symbol Pafah1b1
Gene Name platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa), transcript variant X2
Entrez Gene ID 101709906

Database interlinks

Part of NW_004624786.1 (Scaffold)

For more information consult the page for NW_004624786.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PAFAH1B1 ENSCPOG00000014648 (Guinea pig)

Gene Details

platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000013199, Guinea pig)

Protein Percentage 99.76%
CDS Percentage 97.15%
Ka/Ks Ratio 0.01001 (Ka = 0.0011, Ks = 0.1133)

PAFAH1B1 ENSG00000007168 (Human)

Gene Details

platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)

External Links

Gene Match (Ensembl Protein ID: ENSP00000380378, Human)

Protein Percentage 99.51%
CDS Percentage 96.5%
Ka/Ks Ratio 0.01578 (Ka = 0.0022, Ks = 0.1424)

Pafah1b1 ENSMUSG00000020745 (Mouse)

Gene Details

platelet-activating factor acetylhydrolase, isoform 1b, subunit 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000021091, Mouse)

Protein Percentage 99.76%
CDS Percentage 95.77%
Ka/Ks Ratio 0.00548 (Ka = 0.0011, Ks = 0.1983)

Pafah1b1 ENSRNOG00000002755 (Rat)

Gene Details

platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (Pafah1b1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000003696, Rat)

Protein Percentage 99.76%
CDS Percentage 95.93%
Ka/Ks Ratio 0.00583 (Ka = 0.0011, Ks = 0.187)

Genome Location

Sequence Coding sequence

Length: 1233 bp    Location: 5223862..5303764   Strand: +
>XM_004857186.1
ATGGTGCTCTCCCAGAGACAACGAGATGAACTAAATCGAGCTATAGCAGATTATCTTCGTTCAAATGGCTATGAAGAGGCATATTCAGTTTTTAAAAAGGAAGCTGAATTAGATATGAATGAAGAATTAGATAAGAAGTATGCTGGTCTTTTGGAAAAAAAATGGACATCTGTTATTAGATTACAAAAGAAGGTTATGGAATTAGAATCAAAGCTAAATGAAGCAAAAGAGGAATTTACATCAGGTGGTCCTCTTGGTCAGAAACGAGACCCAAAAGAATGGATTCCCCGTCCACCAGAAAAATATGCACTGAGTGGTCATAGGAGTCCAGTCACTCGAGTCATTTTCCATCCTGTGTTCAGTGTTATGGTCTCTGCTTCAGAGGATGCTACAATTAAGGTGTGGGATTATGAGACTGGAGATTTTGAACGAACTCTTAAGGGGCATACGGACTCTGTACAAGACATTTCCTTTGACCACAGTGGCAAGCTTCTGGCTTCCTGTTCTGCAGATATGACCATTAAACTATGGGATTTTCAGGGCTTTGAGTGCATCAGAACCATGCATGGCCATGACCACAATGTCTCTTCAGTAGCCATCATGCCCAATGGAGATCATATAGTTTCTGCCTCAAGGGATAAAACTATAAAAATGTGGGAAGTGCAAACTGGCTACTGTGTGAAGACATTCACAGGACACAGAGAATGGGTACGTATGGTGCGGCCCAATCAGGATGGCACTCTGATAGCCAGCTGTTCCAATGATCAGACTGTCCGCGTATGGGTTGTAGCAACAAAGGAATGCAAGGCTGAGCTCCGAGAACATGAGCATGTGGTAGAATGCATTTCCTGGGCTCCAGAAAGCTCATATTCTTCCATCTCTGAAGCAACAGGATCTGAGACTAAAAAAAGTGGCAAGCCTGGGCCATTCTTGCTGTCTGGATCTAGAGACAAAACTATTAAGATGTGGGACGTCAGTACTGGCATGTGCCTTATGACCCTTGTGGGTCATGATAACTGGGTACGTGGAGTTCTGTTCCATTCTGGGGGGAAGTTTATTTTGAGTTGTGCTGATGACAAGTCCCTACGTGTATGGGATTACAAGAACAAGCGATGCATGAAGACCCTCAATGCGCATGAACACTTTGTTACCTCCTTGGATTTCCACAAGACGGCCCCCTACGTGGTTACTGGCAGTGTAGATCAAACAGTAAAGGTGTGGGAGTGCCGTTGA

Related Sequences

XP_004857243.1 Protein

Pafah1b1 PREDICTED: platelet-activating factor acetylhydrolase IB subunit alpha isoform X2 [Heterocephalus glaber]

Length: 410 aa      View alignments
>XP_004857243.1
MVLSQRQRDELNRAIADYLRSNGYEEAYSVFKKEAELDMNEELDKKYAGLLEKKWTSVIRLQKKVMELESKLNEAKEEFTSGGPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKSLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR