| Gene Symbol | Smg6 |
|---|---|
| Gene Name | smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans), transcript variant X1 |
| Entrez Gene ID | 101703882 |
For more information consult the page for NW_004624786.1 (Scaffold)
The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.
| Protein Percentage | 93.51% |
|---|---|
| CDS Percentage | 93.82% |
| Ka/Ks Ratio | 0.22558 (Ka = 0.0337, Ks = 0.1495) |
SMG6 nonsense mediated mRNA decay factor
| Protein Percentage | 91.4% |
|---|---|
| CDS Percentage | 90.88% |
| Ka/Ks Ratio | 0.17011 (Ka = 0.0448, Ks = 0.2632) |
Smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)
| Protein Percentage | 90.9% |
|---|---|
| CDS Percentage | 89.11% |
| Ka/Ks Ratio | 0.14267 (Ka = 0.0495, Ks = 0.3472) |
SMG6 nonsense mediated mRNA decay factor (Smg6), mRNA
| Protein Percentage | 88.0% |
|---|---|
| CDS Percentage | 87.16% |
| Ka/Ks Ratio | 0.16091 (Ka = 0.0662, Ks = 0.4113) |
>XM_004857167.1 ATGGCGGAGGGGTTGGAGCGTGTGCGGATCTCTGCGTCGGAACTGCGAGGGATCCTGGCCACTCTGGCTCCGCAGGCCGGGAGCAGAGAAAACATGAAGGAATTAAAGGAGCCCAGGCAGCGCAAAGATAACAGGCGCCCAGATCTGGAAATTTATAAGCCTGGTCTTTCTCGACTAAGGAACAGACCTAAAATCAAGGAACCCTCTGGGGGTGAGGAATTTAAGGATGAACTTGTTAATGACAGAGATTCTTCTGCTGTTGGAAATGGTACACAGCTCATTAAAGATGCCTGCAAGGAACTGGACAACCAACAGCAAAATGGCCCTGTAGACCTAGAAAACAATCAAGGACAGGAAACCTTTCATAGGACTGCTGGACAAGAGGATCAAAGTCTAAGAATCATCAAAAGAACAAAGAAACCAGACCTGCAGATCTATCAGCCAGGACGGCGTATGCAGACTGTTAACAAAGAGTCAGCTAGCCGGGTGGATGAGGAAGAGATCCTTAACCAGGTAGAACACCTGAGAGTAGCAGAAGATGAGTGTAGGGGAAAACTTGTGAAAGAGGAAGTTGTGAATAAACCAGACAAAACTCAGACAGAAAAGAGCCAAAATAGTGACAGAATAAGGACTTCAAAGGGAGAAAAAGGAAAAAGGGTTAAAAGGGGGGAGGGGACAAAGAAAGTGAATGATGACATGACCCAGGGAAAGCTAGGTTCTGCAAAACGCTACTCACGCTCAGACAAGCGAAGGAACCGCTACCGAACTTGCAGTACCAGCTCAGCTGGTAGTAACAACAGTGCTGAGGGAGCTGGTCTGACTGATAATGGGTGCCGCCGCCGCAGGCAGGATCGGACCAAAGAGAGGCCACGACTGAAAAAGCAAGTATCTCTATCCTCAACTGATTCCCTAGATGATGACAAAATTGATGAGCCTGATGAATTGGGGCCCAGGAGGAGCTCAGAAAGGAGGAAACATTCAGAAAGAAATTGGTCTGCCCATGGGGAGGGTGAGCAGAAAAGCAATGGTAAAGAAAATCGAGGCACTCTTCGTGTCACTTTTGAAGAAAATGCAGAAACCATGAACAAAGACTCCCCCAAGATGAGGTCAGCCAGAAAAGATGTGGATAGGATAAAGCCTGACAAAAGCCTGAGCAATGAGGGCAGAGGCTCTGAGAAGCAGGAGTCCAAAAACCTGAAACAAGAACTTCGGGGTCAGGGTCGTGGCATTCTGATTCTGCCTGCCCATACTGCCCTATCTGTCAATTCAGCAGGTTCTCCAGAATCTACACCTTTGGGACCTCGGCTTTTATTTGGATCTGGTAGTAAGGGATCTCGGAGTTGGGGCCGTGGAGGCACCACCCGCCGACTGTGGGACCCAAATAATCCTGATCAGAAACCTGCTCTAAAGAGCCAGACACCCCAGCTACATTTCTTGGACACTGATGATGAAGTCAGTCCTACATCTTGGGGTGACTCACGTCAGGCCCAAACATCTTACTATAAATTTCAAAACTCTGACAACCCTTATTACCCCCGGACACCAGGTCCTGCCTCCCAGTATCCCTATACAGGCTATAGCCCTCTCCAGTACCCAGCGGGCCCTACAAATGGTGTGTACCCAGCGCCTTACTACCCAGGCTACCCAACTCCACCAGGACAATATGTATGTAGCCTGCTCCCTGCCAGCGCTATGAGTCCTGAGGAGGTAGAGCAGCATGTGAGGAACATGCAGCAACAAGAGTTACATAGGCTTCTTCGGGTGGCTGACAACCAGGAACTACAGCTCAGCAACCTGCTTTCCAGGGACCACATCAGTACTGAGGGCATGGAGAAGATGGCTCAACTCAGAGCTGAACTGCTGCAGTTGTATGAACGTTGTATTCTATTAGATATTGAGTTCTCTGATAATCAGAATGTGGATCAGATCCTGTGGAAGAATGCTTTCTATCAGGTGATTGAGAAGTTCAGGCAGCTTCTCAAGGATCCAAATGTTGACAACCCAGAACAGATTCGAAACAGACTTTTGGAGCTCTTGGATGAGGGTAGCAACTTCTTTGATAGTTTGCTTCAGAAGCTGCAGGTTACTTACAAGTTCAAACTGGAAGACTACATGGACGGTCTTGCCATTCGTAGCAAGCCATTACGCAAGACAGTAAAATATGCCTTGATCAGTGCCCAGAGATGTATGATTTGCCAAGGAGATATCGCACGGTATAGAGAGCAAGCCAATGACACAGCAAACTATGGGAAAGCACGCAGTTGGTACTTGAAGGCACAACACATTGCTCCCAAGAATGGACGCCCCTACAACCAGTTGGCTTTGCTGGCAGTGTATACGAGGAGGAAGCTTGATGCTGTATATTACTATCTGCGCAGTTTAGCTGCCAGCAACCCTATCCTGACTGCCAAGGAGAGTCTCATGAGCTTGTTTGAAGAGACCAAACGAAAGGCAGAACAAATGGAGAAGAAACAACAAGAGGAGTTTGAACTAAATCCTGACCAGTGGCGAAAAGGAAAGAAGTCTACCTTCCGGCATGTTGGAGATGACACCACTCGTTTGGAGATCTGGATTCATCCATCCCATCCCCGGTCTTCCCAGGGAACTGAGTCTGGGAAGGATTCTGAGCAGGAGAATGGTCTGGGCAGCCTGAGCGCTAGTGACCTGAACAAAAGGTTCATCCTCAGTTTTCTCCATGCCCATGGGAAGCTGTTTACCCGGATTGGGATGGAGACATTCCCTTCAGTGGCTGAGAAGGTCCTCAAGGAGTTCCAGGTGTTGCTGCAACATAGCCCATCTCCTATTGGAAGTACCCGTATGCTGCAGCTTATGACTATCAACATGTTCGCCATACATAATTCCCAGTTGAAAGACTGCTTTTCAGAGGAGTGTCGCTCTGTGATCCAGGAGCAAGCTGCAGCCCTCGGCCTTGCCATGTTTTCTCTCCTGGTGCGGCGCTGCACCTGCCTACTTAAGGAGTCTGCCAAAGCTCAGCAGTCCTCTCCTGAGGACCAGGATGACCAAGATGACATCAGGGTGTCTTCCTTCATCCCAGACCTGAAGGAACTGCTCCCCAGTGTGAAAGTATGGTCAGACTGGATGCTCGGCTACCCGAACACCTGGAATCCTCCACCCACATCTCTGGATCTGCCCTCACAGGTTGCTGTGGATGTATGGTCGACGCTGGCTGATTTTTGTAACATACTGACTGCAGTGAATCAGTCTGAGGTGCCACTGTACAAGGACCCGGACGATGACCTCACCCTTCTTATCCTGGAAGAGGATCGGCTTCTCTCAGGCTTTGTCCCCTTGCTAGCTGCCCCACAGGACCCCTGCTACGTGGAGAAAACCTCGGATAAGGTTATTGCAGCCGACTGCAAAAGGGTCACAGTGCTGAAGTATTTTCTGGAAGCCCTTTGTGGACAAGAAGAGCCTCTGCTGGCATTCAAGGGTGGAAAATATGTGTCAGTGGCACCCGTCCCAGACACCATGGGAAAGGAAATGGGAAGCCAAGAGGGAAAACAACTGGAAGATGAGGAAGAAGACGTGGTGATTGAAGACTTTGAGGAAGATTCAGAGGGTGAAGGCAGCGGAGGCGAGGATGACATCAGGGAACTTCGGGCCAAGAAGTTGGCTCTAGCCAGGAAGATAGCCGAGCAGCAGCGTCGCCAAGAAAAGATCCAGGCTGTCCTGGAGGACCAGAGTCAGATGAGGCAGATGGAGCTGGAGATCAGACCCTTGTTCCTCGTACCAGACACCAACGGCTTCATTGACCACCTGGCCAGTCTGGCACGGCTGCTGGAGAGCCGGAAGTACATCCTTGTGGTGCCCCTCATTGTGATCAATGAGCTGGATGGCCTGGCCAAGGGGCAGGAGACAGACCACCGGGCTGGGGGCTATGCCCGTGTGGTCCAAGAAAAGGCCCGGAAATCCATCGAGTTCCTTGAGCGACGATTCGAGAGTCGGGACTCTTGCCTGCGGGCCCTCACTAGCCGGGGCAATGAACTTGAATCCATCGCCTTCCGCAGTGAGGACATCACTGGCCAGCTGGGTAACAATGATGACCTGATCCTCTCCTGTTGCCTCCACTACTGCAAAGACAAAGCTAAGGACTTCATGCCCACCAGCAAAGAGGAGCCAATCCGTCTACTGCGGGAGGTGGTGCTGCTGACTGATGACCGGAACCTGCGTGTGAAGGCACTTACGAGGAATGTGCCTGTACGGGACATCCCAGCCTTCCTTACGTGGGCCCAGGTGGGCTGA
Smg6 PREDICTED: telomerase-binding protein EST1A isoform X1 [Heterocephalus glaber]
Length: 1420 aa View alignments>XP_004857224.1 MAEGLERVRISASELRGILATLAPQAGSRENMKELKEPRQRKDNRRPDLEIYKPGLSRLRNRPKIKEPSGGEEFKDELVNDRDSSAVGNGTQLIKDACKELDNQQQNGPVDLENNQGQETFHRTAGQEDQSLRIIKRTKKPDLQIYQPGRRMQTVNKESASRVDEEEILNQVEHLRVAEDECRGKLVKEEVVNKPDKTQTEKSQNSDRIRTSKGEKGKRVKRGEGTKKVNDDMTQGKLGSAKRYSRSDKRRNRYRTCSTSSAGSNNSAEGAGLTDNGCRRRRQDRTKERPRLKKQVSLSSTDSLDDDKIDEPDELGPRRSSERRKHSERNWSAHGEGEQKSNGKENRGTLRVTFEENAETMNKDSPKMRSARKDVDRIKPDKSLSNEGRGSEKQESKNLKQELRGQGRGILILPAHTALSVNSAGSPESTPLGPRLLFGSGSKGSRSWGRGGTTRRLWDPNNPDQKPALKSQTPQLHFLDTDDEVSPTSWGDSRQAQTSYYKFQNSDNPYYPRTPGPASQYPYTGYSPLQYPAGPTNGVYPAPYYPGYPTPPGQYVCSLLPASAMSPEEVEQHVRNMQQQELHRLLRVADNQELQLSNLLSRDHISTEGMEKMAQLRAELLQLYERCILLDIEFSDNQNVDQILWKNAFYQVIEKFRQLLKDPNVDNPEQIRNRLLELLDEGSNFFDSLLQKLQVTYKFKLEDYMDGLAIRSKPLRKTVKYALISAQRCMICQGDIARYREQANDTANYGKARSWYLKAQHIAPKNGRPYNQLALLAVYTRRKLDAVYYYLRSLAASNPILTAKESLMSLFEETKRKAEQMEKKQQEEFELNPDQWRKGKKSTFRHVGDDTTRLEIWIHPSHPRSSQGTESGKDSEQENGLGSLSASDLNKRFILSFLHAHGKLFTRIGMETFPSVAEKVLKEFQVLLQHSPSPIGSTRMLQLMTINMFAIHNSQLKDCFSEECRSVIQEQAAALGLAMFSLLVRRCTCLLKESAKAQQSSPEDQDDQDDIRVSSFIPDLKELLPSVKVWSDWMLGYPNTWNPPPTSLDLPSQVAVDVWSTLADFCNILTAVNQSEVPLYKDPDDDLTLLILEEDRLLSGFVPLLAAPQDPCYVEKTSDKVIAADCKRVTVLKYFLEALCGQEEPLLAFKGGKYVSVAPVPDTMGKEMGSQEGKQLEDEEEDVVIEDFEEDSEGEGSGGEDDIRELRAKKLALARKIAEQQRRQEKIQAVLEDQSQMRQMELEIRPLFLVPDTNGFIDHLASLARLLESRKYILVVPLIVINELDGLAKGQETDHRAGGYARVVQEKARKSIEFLERRFESRDSCLRALTSRGNELESIAFRSEDITGQLGNNDDLILSCCLHYCKDKAKDFMPTSKEEPIRLLREVVLLTDDRNLRVKALTRNVPVRDIPAFLTWAQVG