Sequence details NCBI ID: XM_004857148.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Smyd4
Gene Name SET and MYND domain containing 4
Entrez Gene ID 101698542

Database interlinks

Part of NW_004624786.1 (Scaffold)

For more information consult the page for NW_004624786.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SMYD4 ENSCPOG00000006737 (Guinea pig)

Gene Details

SET and MYND domain containing 4

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000006070, Guinea pig)

Protein Percentage 87.31%
CDS Percentage 89.32%
Ka/Ks Ratio 0.28854 (Ka = 0.0712, Ks = 0.2467)

SMYD4 ENSG00000186532 (Human)

Gene Details

SET and MYND domain containing 4

External Links

Gene Match (Ensembl Protein ID: ENSP00000304360, Human)

Protein Percentage 76.38%
CDS Percentage 81.45%
Ka/Ks Ratio 0.3141 (Ka = 0.1455, Ks = 0.4633)

Smyd4 ENSMUSG00000018809 (Mouse)

Gene Details

SET and MYND domain containing 4

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000047505, Mouse)

Protein Percentage 72.74%
CDS Percentage 79.61%
Ka/Ks Ratio 0.35023 (Ka = 0.1731, Ks = 0.4941)

Smyd4 ENSRNOG00000026783 (Rat)

Gene Details

SET and MYND domain containing 4 (Smyd4), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000029945, Rat)

Protein Percentage 73.99%
CDS Percentage 79.86%
Ka/Ks Ratio 0.3396 (Ka = 0.1687, Ks = 0.4969)

Genome Location

Sequence Coding sequence

Length: 2403 bp    Location: 4547677..4499205   Strand: -
Raw sequence   
>XM_004857148.1
ATGGATCTGCCTGTGAATGAATGGAAATCCTACGTACTTCAGAAGTGGTCTTTACTTCCGAAGTCGGCTCAGGTCACAATTTCTACCACAGAGACTTTAAGCGAAATCTTTTTTCATTCTTCCTCATTTCTTCAATCTGAGGATGAGAGGTTTTTAAAAAGACTTTCTCAAGGTTACTTGGTGGGAAAGGATCCCAACGCTCCCCGTTTCTACAGAGAAGAAGGAAACAAAAACTTCCAGGAGAAGAATTACACTGGGGCCGCAGTGCTGTACTCTAAGGGAGTTTCACATTCAAGGCCTAACACTGAGGACATTTCACTGTGCTATGCTAATCGTTCTGCAGCCCTCTTCCACTTGGGTCAGTACGAAACCTGTCTCAACGATATCATCAGAGCACTGGTGCATGGATATCCAGAAAGACTGAAGCCCAAGGTGATGTTGCGTAAGGCGGAGTGCCTGGTGACCCTGGGGAGACTGAAGGAGGCAAGCCAGACTATCAGTGATCTTGAAAGTAATGTCAGTGCCAGACCAACACCAGCAGCTTCCCCCTTTCACATTCTGCAGAAAAACCTCTGTGATCTAAAAATGAAGATACAGGAAAAGGAGAATCTACCAGAAACCTTCCCCACAGCTATAGCCAAAGACTTTGAGGGTATGAACCTAACCGAAGAGAATGAGCAAATTTCCAATGCATCATCATCTGTCCGCTTATGCACAGACCCTTTAAAAGGCCGCTATTTGGTTGCCATAAAAGACATTCTCCCAGGAGAGATTCTAGTGAAGGAGGATGCTTTTGTGAGTGTCCTCAACCCAGGAGAAATGCCACCACTGCATCAAGGCTTAGAGAGCAGGTGGGATACCAGAGTTACCAATGGGGACCTCTACTGTCACAAATGTTTGAAGCATACTTTGGCCATGGTTCCCTGCCATGGATGTAGCTATGCCAACTATTGCAGCCAGGAGTGTATGCAGCAGGCCTGGGAGCTGTATCATAGCATAGAGTGTTCTTTAGGGGGGCTATTGCTCACGCTGGGTATGTTTTGCCACGTTGCCCTGAGGTTGACTCTCTTGGCTAGATTCAAAGATGTGGACAAAGTTGTAAGGAGGATTTGTGATGAGATTAACAACAAGGAGATATGTTTACCTGAAAGCAAGACTCTGGTCAAGACATTCAACTACAACCAGGGGGAAAGAGAAGAAATTGGCAAAACAGTTGAGACTCAAATTCCTGGATGTAATATTAATGGAAAGTATGAAAATAATTATAATGCTGTCTTCAGTCTTTTACCCCATACTGAAAACCATAGCCCAGAGCATAAATTTCTCTGTGCTCTCAGCATCTCTGCACTGTGTAGGCAGCTTGAAGCAGCCAGCCTGCCTGCCCTCACCACAGGTCTGAAAGCAGCAGTGACTCCTGAGTTGTGTGCGGATTTGAACATTTGGGCAGTGGCCATGCTGCGACACTTGTTACAACTGCAGTGTAATGCTCAGGCAATAACTACCATACAGCACACAGGATCTAAAGAGAACATTGTTACTGACAGCGGGCAGGTACGTCTTGCTACAGGCATCTTCCCTGTTGTGAGCCTCCTGAACCACTCCTGCAGCCCCAACACCAGCATATCCTTTGCTGGCACTGTCGCCACCATTCGGGCAGCCCAGCAGATTGGAAAAGGGCAGGAGATTCTCCATTGCTATGGGCCTCACAAGAGCTGGATGAGTATCGCTGAAAGGCAACAGAAGCTGAGGTCTCAGTACTTCTTTGACTGCAACTGTCCAGCTTGTCATTATGAGAAGCTCAGAACAGCTGCAGGGCCCAGGTGGGAAGCATTCCGTTGTAATAATTGCAGAGCACTCATGCAGGGAGATGACGTCCTGAGCTGTGGGAACAGAGCTTGTCTGGAACCCATCAGCAGGAACCACCTGGTCTCTCAGTTGCAGGACCTTCAGCAGCAGGTTGGGATAGCTTCGAAGCTTCTCAGAAATGGCAAACTCGACCAAGCCATTCCAAGGTTGTTGAGGTGCCGGCAAGATGCTGAGAGCTTCCTGGCAGCAGAGCATGCTGTGGCAGGGGAAATTGAGGACAACCTGGCCCGTGCCTATGCTGCCCTAGGGGATTGGCAAAAGTCAGCTACCCACCTACAGAAGAGTCTCCAAGTGGTTGAGGCTCGCCATGGGCCATCCAGTGTTGAAATGGGCCATGAGCTCTTCAAACTAGCCCAAGTCCTGTTCAATGGGTTTGCTGTCCCTGAAGCTCTGAATGCCATACAGAAGGCAGAAGAGGTCCTGTTGGTGCACTGTGGCCCTCAGAGTGACGAGGTCCAGGAGCTCCAGGAGATGAGGTCCTGTTTACTGGACTGGCCACCCTTCCCTATGGGGTCCCAAAGGGATTCTGGCCCGTAG

Related Sequences

XP_004857205.1 Protein

Smyd4 PREDICTED: SET and MYND domain-containing protein 4 [Heterocephalus glaber]

Length: 800 aa      View alignments
>XP_004857205.1
MDLPVNEWKSYVLQKWSLLPKSAQVTISTTETLSEIFFHSSSFLQSEDERFLKRLSQGYLVGKDPNAPRFYREEGNKNFQEKNYTGAAVLYSKGVSHSRPNTEDISLCYANRSAALFHLGQYETCLNDIIRALVHGYPERLKPKVMLRKAECLVTLGRLKEASQTISDLESNVSARPTPAASPFHILQKNLCDLKMKIQEKENLPETFPTAIAKDFEGMNLTEENEQISNASSSVRLCTDPLKGRYLVAIKDILPGEILVKEDAFVSVLNPGEMPPLHQGLESRWDTRVTNGDLYCHKCLKHTLAMVPCHGCSYANYCSQECMQQAWELYHSIECSLGGLLLTLGMFCHVALRLTLLARFKDVDKVVRRICDEINNKEICLPESKTLVKTFNYNQGEREEIGKTVETQIPGCNINGKYENNYNAVFSLLPHTENHSPEHKFLCALSISALCRQLEAASLPALTTGLKAAVTPELCADLNIWAVAMLRHLLQLQCNAQAITTIQHTGSKENIVTDSGQVRLATGIFPVVSLLNHSCSPNTSISFAGTVATIRAAQQIGKGQEILHCYGPHKSWMSIAERQQKLRSQYFFDCNCPACHYEKLRTAAGPRWEAFRCNNCRALMQGDDVLSCGNRACLEPISRNHLVSQLQDLQQQVGIASKLLRNGKLDQAIPRLLRCRQDAESFLAAEHAVAGEIEDNLARAYAALGDWQKSATHLQKSLQVVEARHGPSSVEMGHELFKLAQVLFNGFAVPEALNAIQKAEEVLLVHCGPQSDEVQELQEMRSCLLDWPPFPMGSQRDSGP