Sequence details NCBI ID: XM_004857140.1 (Coding sequence)

Details from NCBI annotation

Gene Symbol Prpf8
Gene Name pre-mRNA processing factor 8, transcript variant X1
Entrez Gene ID 101724713

Database interlinks

Part of NW_004624786.1 (Scaffold)

For more information consult the page for NW_004624786.1 (Scaffold)

Genome Location

Sequence Coding sequence

Length: 7008 bp    Location: 4392569..4356481   Strand: -
Raw sequence   
>XM_004857140.1
ATGGCCGGAGTATTTCCATACCGAGGGCCGGGTAACCCGGTGCCCGGCCCTCTAGCCCCGCTGCCGGACTACATGTCGGAGGAGAAGCTGCAAGAAAAAGCCCGAAAATGGCAGCAATTGCAGGCCAAGCGCTATGCAGAAAAACGGAAGTTTGGATTTGTGGATGCTCAGAAGGAAGACATGCCTCCAGAACATGTCAGGAAGATAATAAGAGACCATGGAGACATGACCAACAGGAAGTTTCGCCATGACAAAAGGGTCTATTTGGGTGCCCTAAAGTACATGCCCCATGCAGTCCTCAAGCTTCTGGAGAACATGCCTATGCCTTGGGAGCAGATTCGGGATGTGCCTGTTCTGTACCACATCACTGGAGCCATTTCCTTCGTCAATGAGATTCCCTGGGTCATTGAGCCAGTCTACATCTCCCAGTGGGGGTCAATGTGGATTATGATGCGTAGAGAAAAAAGAGATAGGAGGCATTTCAAAAGGATGCGATTCCCCCCTTTTGATGATGAGGAACCGCCCTTGGACTATGCTGACAACATCCTAGATGTTGAGCCACTGGAAGCCATTCAGCTAGAGCTGGATCCCGAGGAGGATGCTCCTGTATTGGACTGGTTCTATGACCACCAGCCACTGAGAGACAGCAGGAAATACGTTAATGGCTCCACTTACCAGCGCTGGCAGTTCACATTGCCTATGATGTCCACTCTCTACCGCTTAGCCAATCAACTCCTGACAGACTTAGTGGATGACAACTATTTCTATCTGTTTGACCTAAAGGCCTTCTTTACCTCTAAGGCACTCAATATGGCCATTCCTGGAGGCCCCAAATTTGAACCTCTTGTTCGAGACATCAACCTACAGGATGAAGACTGGAATGAATTCAACGATATTAACAAGATCATCATCCGGCAGCCTATCCGCACTGAGTACAAGATTGCTTTTCCTTATTTATACAACAACCTTCCACACCATGTCCACCTCACTTGGTACCACACTCCCAATGTTGTGTTCATCAAAACTGAGGATCCCGATTTGCCCGCTTTCTACTTTGATCCTTTGATTAACCCAATTTCCCATAGGCACTCAGTCAAGAGCCAGGAGCCATTGCCTGATGACGATGAGGAATTTGAGCTCCCAGAGTTTGTGGAGCCCTTCCTGAAGGACACACCCCTCTACACAGACAACACAGCCAATGGCATTGCCCTGCTCTGGGCCCCACGGCCCTTCAACTTACGCTCTGGTCGCACCCGCAGGGCCCTGGATATACCCCTTGTCAAGAACTGGTACCGGGAGCATTGTCCTGCTGGGCAGCCTGTGAAAGTGAGAGTCTCCTACCAGAAGCTGCTTAAGTACTATGTGCTGAATGCTCTGAAGCATCGGCCCCCTAAGGCCCAGAAGAAGAGGTATCTCTTCCGCTCTTTTAAAGCTACCAAATTCTTTCAGTCCACAAAACTGGACTGGGTGGAAGTGGGACTACAAGTTTGCCGTCAGGGATACAACATGCTCAACCTTCTTATCCACCGTAAAAACCTCAACTACCTGCACCTGGACTACAACTTCAACCTCAAGCCTGTGAAGACCCTTACCACCAAGGAAAGAAAGAAATCTCGTTTTGGGAATGCTTTCCATCTGTGTCGAGAAGTACTGCGTTTAACAAAGCTGGTTGTGGACAGTCATGTTCAGTATCGATTGGGCAATGTGGATGCCTTCCAGTTGGCAGATGGATTGCAGTATATATTTGCCCATGTGGGCCAGCTAACTGGGATGTATCGATACAAATACAAGCTGATGCGACAGATCCGCATGTGCAAGGACTTGAAGCATCTCATCTATTACCGCTTCAATACGGGCCCTGTGGGGAAAGGCCCTGGCTGTGGCTTCTGGGCTGCTGGCTGGCGGGTCTGGCTGTTTTTCATGCGTGGCATTACCCCTTTGCTGGAGCGATGGCTGGGCAACCTTCTGGCCCGGCAGTTTGAAGGCCGACACTCGAAAGGGGTGGCAAAAACTGTAACAAAGCAGCGCGTGGAGTCCCATTTTGACCTTGAGCTTCGGGCAGCTGTAATGCATGACATTCTGGACATGATGCCTGAGGGGATCAAACAGAACAAGGCCCGAACAATATTGCAGCACCTCAGTGAAGCCTGGCGCTGCTGGAAGGCCAACATTCCCTGGAAGGTCCCAGGACTACCAACACCCATAGAGAATATGATCCTTCGATACGTGAAGGCCAAAGCTGACTGGTGGACCAACACTGCCCACTACAACCGAGAACGGATCCGCCGAGGGGCCACCGTGGACAAGACTGTTTGCAAAAAGAACTTGGGCCGCCTCACTAGGCTGTACTTGAAGGCAGAACAGGAGCGGCAGCACAATTACCTGAAGGATGGGCCTTACATCACAGCAGAGGAAGCAGTGGCAGTATATACCACCACTGTGCATTGGTTGGAAAGCCGTAGATTCTCACCCATCCCGTTCCCCCCACTGTCTTACAAGCATGACACCAAGTTGCTTATCTTGGCTTTGGAGCGACTCAAGGAAGCTTATAGTGTGAAATCTCGGTTAAACCAGTCTCAGAGGGAGGAGCTAGGTCTGATCGAGCAAGCCTATGACAACCCGCATGAGGCATTGTCCCGAATCAAGCGTCACCTCCTCACACAGAGAGCCTTTAAGGAAGTGGGCATTGAGTTCATGGATCTCTATAGCCACCTGGTGCCAGTATATGATGTGGAACCACTGGAGAAGATAACTGATGCATACCTAGACCAGTACCTGTGGTACGAAGCAGACAAGCGCCGCCTTTTCCCACCCTGGATCAAGCCTGCTGACACAGAACCACCTCCACTGCTTGTTTACAAGTGGTGCCAAGGCATCAATAACCTTCAGGATGTGTGGGAGACCAGTGAGGGCGAGTGCAATGTTATGCTGGAATCTCGTTTTGAGAAGATGTATGAAAAGATTGACTTAACCCTGCTGAATAGGTTGCTGCGACTTATCGTGGACCACAACATAGCTGACTACATGACGGCCAAGAACAATGTTGTCATCAACTATAAGGACATGAACCACACAAATTCATATGGGATCATCAGAGGCCTACAGTTTGCCTCATTCATCGTGCAGTACTATGGCTTGGTGATGGATTTGCTGGTGTTGGGATTGCACCGGGCCAGTGAGATGGCAGGGCCCCCTCAGATGCCAAATGACTTTCTCAGTTTCCAGGACATAGCCACTGAGGCTGCCCACCCCATCCGACTCTTTTGTAGATACATTGACCGCATCCATATTTTCTTCAGGTTCACAGCAGATGAGGCTCGAGACCTGATCCAGCGCTACCTGACAGAGCATCCTGACCCCAACAATGAAAACATCGTTGGCTATAATAACAAGAAGTGTTGGCCCCGAGACGCCCGCATGCGCCTCATGAAGCATGATGTCAACTTGGGTCGGGCAGTTTTCTGGGACATCAAGAACCGTCTCCCACGATCAGTGACAACAGTTCAGTGGGAGAACAGCTTTGTGTCTGTGTATAGTAAGGACAACCCCAACTTGCTGTTCAACATGTGTGGCTTTGAATGCCGCATCCTGCCTAAATGCCGCACCAGCTATGAGGAGTTCACCCATAAGGATGGGGTCTGGAACCTGCAGAATGAGGTTACAAAGGAGCGGACAGCTCAGTGTTTCCTACGTGTGGATGATGAATCAATGCAGCGCTTCCACAACCGTGTGCGTCAAATTCTGATGGCCTCTGGCTCCACCACTTTCACCAAGATTGTGAATAAGTGGAATACAGCTCTAATTGGCCTTATGACATACTTTCGGGAGGCTGTGGTGAATACCCAGGAACTCTTGGACTTACTAGTAAAGTGTGAGAACAAGATCCAGACACGTATCAAGATTGGACTCAACTCCAAGATGCCAAGTCGGTTCCCCCCTGTTGTGTTCTACACCCCAAAGGAGTTAGGTGGACTCGGCATGCTCTCAATGGGCCATGTGCTCATCCCCCAGTCTGACCTCAGGTGGTCTAAGCAGACTGATGTTGGTATCACACATTTTCGCTCAGGAATGAGCCATGAAGAAGACCAACTGATTCCCAACTTGTACCGCTACATACAGCCATGGGAGAGTGAGTTCATTGATTCTCAGCGGGTCTGGGCTGAGTATGCGCTCAAGAGACAAGAGGCCATTGCTCAGAACAGACGGCTAACTTTAGAAGATCTAGAAGACTCATGGGATCGTGGCATTCCTCGAATCAATACCCTCTTCCAAAAGGACCGGCACACATTGGCTTATGATAAGGGCTGGCGTGTCCGAACTGACTTTAAGCAGTACCAAGTTTTGAAGCAGAACCCTTTCTGGTGGACACACCAGCGGCATGATGGGAAGCTCTGGAATCTAAACAACTACCGTACAGATATGATCCAGGCTCTGGGTGGTGTGGAAGGCATTCTGGAACACACACTCTTCAAGGGCACTTACTTCCCTACCTGGGAGGGTCTTTTCTGGGAGAAGGCCAGTGGCTTTGAAGAGTCTATGAAGTGGAAAAAGCTAACTAACGCTCAGCGATCAGGTTTGAACCAGATTCCCAATCGTAGATTCACCCTCTGGTGGTCCCCAACCATCAATCGAGCCAATGTATATGTGGGCTTTCAGGTACAGCTGGACCTGACAGGTATCTTCATGCATGGCAAGATCCCCACACTGAAGATCTCTCTCATCCAGATCTTCCGAGCTCACTTGTGGCAGAAGATCCACGAGAGCATCGTTATGGACTTGTGTCAGGTGTTCGACCAGGAACTAGATGCATTGGAAATTGAGACAGTACAAAAGGAGACAATCCATCCTAGGAAGTCCTATAAGATGAATTCTTCCTGTGCAGACATACTGCTCTTTGCCTCCTATAAGTGGAATGTTTCCCGGCCTTCATTGCTGGCAGACTCCAAGGATGTGATGGACAGCACCACCACTCAGAAGTATTGGATTGACATCCAGTTGCGCTGGGGAGACTATGATTCCCATGACATTGAGCGCTATGCCCGGGCCAAATTCCTGGACTACACCACAGACAACATGAGTATCTACCCTTCACCCACAGGTGTGCTCATTGCCATTGACCTGGCCTATAACCTGCACAGTGCCTATGGAAACTGGTTCCCAGGCAGCAAGCCTCTCATACAACAGGCCATGGCCAAGATCATGAAGGCAAATCCTGCCTTGTATGTGTTACGTGAACGAATCCGGAAGGGGCTTCAGCTCTATTCATCTGAGCCCACTGAGCCTTACCTGTCCTCTCAGAACTATGGTGAGCTCTTCTCCAATCAGATCATCTGGTTTGTGGATGACACTAATGTCTACAGAGTGACTATCCACAAGACCTTTGAAGGGAACTTGACAACAAAGCCTATCAACGGGGCCATCTTTATCTTCAACCCACGAACAGGGCAGCTCTTCCTCAAGATAATCCACACATCTGTGTGGGCTGGACAGAAGCGTTTGGGCCAGCTGGCCAAATGGAAGACAGCTGAGGAAGTGGCTGCCCTGATTCGATCTCTGCCTGTGGAGGAGCAGCCCAAGCAGATCATTGTCACCAGAAAGGGCATGCTGGATCCTTTGGAGGTACACTTACTGGACTTCCCCAACATCGTGATCAAAGGATCGGAGCTCCAACTTCCCTTCCAGGCTTGTCTCAAGGTGGAAAAGTTTGGGGATCTTATCCTTAAAGCCACTGAGCCTCAGATGGTTCTCTTCAACCTCTATGATGACTGGCTCAAGACTATCTCATCCTACACGGCTTTCTCCCGTCTCATCCTGATTCTGCGTGCCCTACATGTGAACAATGACCGGGCGAAGGTGATCCTGAAGCCAGACAAGACTACTATTACAGAACCCCACCACATCTGGCCCACCCTGACAGATGAGGAGTGGATCAAGGTGGAGGTGCAGCTCAAGGATCTGATCTTGGCTGACTACGGCAAGAAAAACAATGTGAACGTAGCATCACTGACACAATCAGAAATTAGAGACATCATCCTGGGAATGGAGATATCAGCACCGTCACAGCAGCGGCAGCAGATAGCCGAGATTGAGAAGCAGACCAAGGAACAGTCCCAGCTGACTGCAACACAGACTCGCACTGTCAACAAACATGGTGATGAGATCATTACCTCCACCACCAGTAACTATGAGACCCAGACTTTCTCATCAAAGACTGAATGGAGGGTCAGGGCCATATCTGCTGCCAACCTGCACCTTCGGACCAATCACATTTATGTTTCATCTGATGACATTAAGGAGACTGGTTATACCTATATCCTTCCCAAGAATGTGCTTAAGAAATTTATCTGCATATCTGACCTTCGTGCCCAAATTGCAGGATACCTGTATGGGGTGAGCCCACCAGATAACCCCCAGGTGAAGGAAATCCGCTGCATTGTGATGGTGCCTCAGTGGGGCACCCACCAGACTGTGCATCTGCCTGGCCAGCTGCCTCAGCATGAGTACCTCAAGGAGATGGAGCCCTTAGGTTGGATCCACACTCAGCCCAATGAGTCCCCCCAGCTGTCCCCCCAGGATGTCACAACCCACGCCAAGATCATGGCTGACAACCCATCTTGGGATGGTGAGAAGACCATTATCATCACTTGCAGCTTCACCCCAGGCTCCTGCACGCTGACAGCCTACAAGCTTACCCCCAGTGGTTATGAATGGGGCCGCCAGAACACAGACAAAGGTAACAACCCCAAGGGTTACCTCCCCTCACACTATGAGAGGGTCCAGATGCTGCTGTCAGACCGCTTCCTCGGCTTCTTCATGGTCCCTGCTCAGTCCTCGTGGAACTACAACTTCATGGGTGTCCGGCATGATCCCAATATGAAGTATGAATTGCAGCTGGCAAACCCCAAGGAGTTCTACCATGAAGTTCACAGACCCTCCCACTTTCTCAACTTTGCTCTCCTGCAAGAGGGCGAGGTCTACTCTGCAGACCGAGAGGACCTCTATGCCTAG

Related Sequences

XP_004857197.1 Protein

Prpf8 PREDICTED: pre-mRNA-processing-splicing factor 8 isoform X1 [Heterocephalus glaber]

Length: 2335 aa      
>XP_004857197.1
MAGVFPYRGPGNPVPGPLAPLPDYMSEEKLQEKARKWQQLQAKRYAEKRKFGFVDAQKEDMPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVPVLYHITGAISFVNEIPWVIEPVYISQWGSMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYADNILDVEPLEAIQLELDPEEDAPVLDWFYDHQPLRDSRKYVNGSTYQRWQFTLPMMSTLYRLANQLLTDLVDDNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFNDINKIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLINPISHRHSVKSQEPLPDDDEEFELPEFVEPFLKDTPLYTDNTANGIALLWAPRPFNLRSGRTRRALDIPLVKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKATKFFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREVLRLTKLVVDSHVQYRLGNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMRQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAAGWRVWLFFMRGITPLLERWLGNLLARQFEGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSEAWRCWKANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLTRLYLKAEQERQHNYLKDGPYITAEEAVAVYTTTVHWLESRRFSPIPFPPLSYKHDTKLLILALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMDLYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQGINNLQDVWETSEGECNVMLESRFEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYKDMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDIATEAAHPIRLFCRYIDRIHIFFRFTADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARMRLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRILPKCRTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFTKIVNKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPKELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPRKSYKMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIERYARAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGSKPLIQQAMAKIMKANPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLYDDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWIKVEVQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQSQLTATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDIKETGYTYILPKNVLKKFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLPGQLPQHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKIMADNPSWDGEKTIIITCSFTPGSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQSSWNYNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGEVYSADREDLYA