Details from NCBI annotation

Gene Symbol Rph3al
Gene Name rabphilin 3A-like (without C2 domains), transcript variant X2
Entrez Gene ID 101716085

Database interlinks

Part of NW_004624786.1 (Scaffold)

For more information consult the page for NW_004624786.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

RPH3AL ENSCPOG00000001101 (Guinea pig)

Gene Details

rabphilin 3A-like (without C2 domains)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000000996, Guinea pig)

Protein Percentage 87.75%
CDS Percentage 90.4%
Ka/Ks Ratio 0.19181 (Ka = 0.0586, Ks = 0.3056)

RPH3AL ENSG00000181031 (Human)

Gene Details

rabphilin 3A-like (without C2 domains)

External Links

Gene Match (Ensembl Protein ID: ENSP00000328977, Human)

Protein Percentage 81.79%
CDS Percentage 84.33%
Ka/Ks Ratio 0.19445 (Ka = 0.1085, Ks = 0.5582)

Rph3al ENSMUSG00000020847 (Mouse)

Gene Details

rabphilin 3A-like (without C2 domains)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000113869, Mouse)

Protein Percentage 83.11%
CDS Percentage 85.54%
Ka/Ks Ratio 0.15867 (Ka = 0.0851, Ks = 0.5364)

Rph3al ENSRNOG00000006454 (Rat)

Gene Details

rabphilin 3A-like (without C2 domains) (Rph3al), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000008697, Rat)

Protein Percentage 82.12%
CDS Percentage 84.33%
Ka/Ks Ratio 0.15059 (Ka = 0.0921, Ks = 0.6117)

Genome Location

Sequence Coding sequence

Length: 909 bp    Location: 3900193..3997932   Strand: +
>XM_004857112.1
ATGGCAGACACCATCTTCGGCAGTGGGAATGACCAGTGGGTCTGCCCCAATGATCGGCAGCTTGCCCTGAGAGCCAAGCTGCAAACAGGCTGGTCTGTGCACACTTACCAGACCGAGAAGCAGAGGAGGAGCCAGCGCCTCAGCCCAGCCGAGATGGAGGCCATCCTGCAGGTCATCCAGAGGGCCGAGCGGCTGGACACCCTGGAGCAGCAGAGAATCGGGCGGCTGGTGGAGCGGCTGGAGACCATGAGGCAAAACGTGATGGGGAACGGCCTCTCCCAGTGTCTGCTGTGTGGGGAGGTGCTGGGCTTCCTGGGCAGCTCATCAGTGTTCTGCAGAGACTGCAGGAAGAAAGTCTGCACCAAATGTGGGATCGAGGCCTCTCCAGGCCAGAAGCGGCCCCTGTGGCTGTGTAAGATCTGCAGTGAGCAAAGAGAGGTCTGGAAGAGGTCAGGGGCCTGGTTCTACAAGGGGATCCCCAAGTATATCTTGCCCCTGAAGACCCCCAGCAGGGCCGATGACCCCCGCTTCCAACCTTTTTCTGTGGAGCCAACTGAGCCGGAGCCCAGAATCACTGAGACCGGCCGTGTCTACACATGGGCTCGAGGGAGAGTGGTTTCCAGCAACAGTGACAGTGACTCAGATCTCAGCTCTTCCAGCCTGGAGGACAGACTCCCGCCCTCTGGGACGAGGGACAAAAAAGGCAACAAACCGGTGGGGGAGGCAGGTGGCAGCATGGAGTCTCCCAGGATGGGGCTCACCCGCGCACCCAGCCACCTCTCGGGGAGCCAGAGCAGCCTGGCCAGGGAGACTGGGACAAGCTCTGCAGACCCACAGGGGCACAGCCTTCCCCAGCCTGAGCCCAGGGGCCCTGGCAAAAGACAAACCTGGGCGACTCCCCGCTGCTGA

Related Sequences

XP_004857169.1 Protein

Rph3al PREDICTED: rab effector Noc2 isoform X2 [Heterocephalus glaber]

Length: 302 aa      View alignments
>XP_004857169.1
MADTIFGSGNDQWVCPNDRQLALRAKLQTGWSVHTYQTEKQRRSQRLSPAEMEAILQVIQRAERLDTLEQQRIGRLVERLETMRQNVMGNGLSQCLLCGEVLGFLGSSSVFCRDCRKKVCTKCGIEASPGQKRPLWLCKICSEQREVWKRSGAWFYKGIPKYILPLKTPSRADDPRFQPFSVEPTEPEPRITETGRVYTWARGRVVSSNSDSDSDLSSSSLEDRLPPSGTRDKKGNKPVGEAGGSMESPRMGLTRAPSHLSGSQSSLARETGTSSADPQGHSLPQPEPRGPGKRQTWATPRC