Sequence details NCBI ID: XM_004857040.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Sez6
Gene Name seizure related 6 homolog (mouse), transcript variant X6
Entrez Gene ID 101722479

Database interlinks

Part of NW_004624786.1 (Scaffold)

For more information consult the page for NW_004624786.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SEZ6 ENSCPOG00000007483 (Guinea pig)

Gene Details

seizure related 6 homolog (mouse)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000006751, Guinea pig)

Protein Percentage 95.19%
CDS Percentage 93.25%
Ka/Ks Ratio 0.11257 (Ka = 0.0239, Ks = 0.2127)

SEZ6 ENSG00000063015 (Human)

Gene Details

seizure related 6 homolog (mouse)

External Links

Gene Match (Ensembl Protein ID: ENSP00000312942, Human)

Protein Percentage 91.92%
CDS Percentage 89.64%
Ka/Ks Ratio 0.11782 (Ka = 0.042, Ks = 0.3567)

Sez6 ENSMUSG00000000632 (Mouse)

Gene Details

seizure related gene 6

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000091532, Mouse)

Protein Percentage 92.21%
CDS Percentage 87.83%
Ka/Ks Ratio 0.08696 (Ka = 0.0417, Ks = 0.4796)

Sez6 ENSRNOG00000009350 (Rat)

Gene Details

seizure related 6 homolog (mouse) (Sez6), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000040374, Rat)

Protein Percentage 92.01%
CDS Percentage 87.33%
Ka/Ks Ratio 0.0856 (Ka = 0.0434, Ks = 0.5073)

Genome Location

Sequence Coding sequence

Length: 3171 bp    Location: 1567737..1521260   Strand: -
Raw sequence   
>XM_004857040.1
ATGCGCCCAGCAGCCCTGCTGCTCCTGCCCTCGCTGCTGGCGCTCGTGGTTCACGGACTCTCCTCAGAGCCCCCAACCATGGGGGAAAGACAAGCCACAGGAATCAAGGAAAGAGATGGGGAGCTGACAGCGGCCCCCACACCTGAGCAGCCAGAGAGAGGTGTCCACTTCATCACAACAGCCCCCACCCTGAAGCTGCTCAACCATCATCCACTGCTGGAGGAATTCCTTCAAGAGGGGCTGGAGACGGGCGAGGAGGAGCTGAGACCTGCACTGCCCTTTCAGCCTACACCCTTCACCCCAAGCCCCCTCACCCGCCTGGCCAACCAGGACAGCCGCCCCGTCTTTACCAGCCCCACACCTGCCATAGCTGTAGCACCCACACAGCCCCAGCCCAGGGAGGGACCTTGGAGCCTAGAGTCAGAGCTCCCTGTGCTTCGTATCACAGCCCCTCTACCTCCAGGGCCCAGCCTTGCAGTGCCTACCCTATACCCAGGGGACCGACCTAGTACTACACCCCCCAGCAGAGCCTGGACTCCAACCCAAGAGGGCCCTGGAGATATGGGCAGGCCATGGGCTCCAGAGGCCATGTCCCAGACCACAGGGCTTGGGACTGAGAGCACCATCACCACCTCCACAGCTTCCGGAGATGACGAGGAGACCACAACCACCATCACCATCATTACCACCACTATCACCACAGTTCAGCCACCAGGCCCTTGTAGTTGGAATTTCTCTGGCCCAGAGGGCTTTCTGGACTCCCCTCAAGCCTACAGCTCACCCTCTGATGTCGGCCTGGACTGTTTCTACTACATCTCTGTTTACCCTGGCTATGGTGTGGAGATCAAGGTCCAGAACATCAGCCTCGGGGAGGGAGAGACAGTAGCTGTGGAGGGCCTTGGGGGCCCTGACCCATTGCCCCTGGCCAACCAGTCTTTCCTTCTCCGGGGCCAAGTCATCCGAAGCCCCACGCACCAAGCAGCCCTGAGGTTCCAGAGCCTCCCGCCACCTGCTGGGCCTGGAACCTTCCATTTCCACTACCAAGCCTACCTCCTGAGCTGCCACTTTCCCCGACAACCAGCCTATGGAGATGTGACTGTCACCAGCCTCCACCCAGGAGGCAGTGCCCGCTTCCACTGTGCCACTGGCTACCAGCTTAAGGGTGCCAGGCTCCTTACTTGTCTCAATGCCACCCAGCCCTTCTGGGATTCCCAGGAGCCTGTCTGTATCGCTGCCTGTGGTGGAGTGATCCGGAATGCCACAACTGGCCGCATTGTCTCTCCGGGCTATCCCGGCAACTACAGCAACAACCTCACCTGCCACTGGCTACTTGAGGCTCCTGAGAGTCAGAGGCTGCACCTGCACTTTGAGAAGGTCGCTCTGGCAGAAGATGATGACAGGCTTATCATTCGCAATGGGGACAATGTGGAGGCCCCGCCTGTGTATGATTCCTACGAGGTGGAATACCTGCCCATTGAGGGCCTGCTCAGCTCTGGCAGACACTTCTTTGTGGAACTCAGTACAGATAGCAGCGGGGCAGCTGCTGGCATGGCCTTGCGCTATGAAGCCTTCCAGCAGGGCCACTGCTATGAGCCCTTTGTCAAATACGGCAACTTCAGCAGCAGCGCACCCTCATACCCTGTGGGTACCACTGTGGAGTTCAGCTGCGACCCTGGCTACACCCTGGAGCAGGGCTCTATCATCATTGAGTGTGTTGACCCCCATGACCCACAGTGGAATGAGACAGAGCCAGCCTGCCGAGGTGGCAGCCCCAGGATATGGAACTGGAGGGAACACAGAGGAGACATCCTCCCAGGCCTCTCCTGCCTTCCAGCCGTGTGCAGTGGGGAGATCACAGATTCAGCCGGTGTAGTACTCTCCCCCAACTGGCCAGAGCCCTATGGCCGAGGGCAGGACTGCATCTGGGGTGTTCATGTGGAAGAGGACAAGCGCATCATGCTGGACATCCGAGTGCTGCGCATAGGTCCTGGTGATGTACTTACCTTCTATGATGGGGATGACCTGACAGCCCGGGTCCTGGGCCAGTACTCAGGGCCACGTGGCCACTTCAAGCTTTTTACCTCCATGGCTGATGTCACCATCCAGTTCCAGTCAGACCCCGGGACTTCAGTGCTGAGTTACCAGCAAGGATTTGTCATCCACTTCTTTGAGGTGCCCCGCAATGACACATGTCCAGAGCTGCCTGAGATCCCCAATGGCTGGAAGAACCCATCGCAGCCTGAGCTGGTACACGGCACTGTAGTCACTTACCAGTGTTACCCTGGGTACCAGGTGGTGGGATCCAGTGTCCTCATGTGCCAGTGGGACCTAAGCTGGAGTGAGGATCTGCCTTCATGCCAGAGGGTGACTTCCTGTCATGACCCTGGGGACGTAGAGCACAGCCGACGCCTCATATCCAGCCCCAGGTTTCCTGTGGGAGCAACCGTGCAGTATATTTGTGACCAGGGTTTTGTGCTGACGGGCAGTGCCATTCTCACCTGCCATGACCGCCAGGCTGGCAGCCCCAAGTGGAGTGACCGGGCTCCCAAATGTCTTTTGGAACAGCTCAAGCCATGCTATGGCCTCAGTGCCCCCAAGAATGGTGCTCGCAGTCCTGAGAAGCGGCTACACCCAGCAGGGGCCACTGTCCACTTCTCATGTGCCCCTGGCTATGTGCTGAAAGGCCAGGCCAGTATTAAGTGTGTGCCTGGGCACCCCTCACACTGGAGTGACCCGCCACCCATCTGTAGGGCTGTTGCCAAGGCACCTGCTACTTCCAGTGCCCTGGATGCTGCCCACATTGCAGCTGCCATCTTCCTGCCACTGGTAGCAATGGGGCTGTTGGTGGGAGGTGTGTACCTTTACTTCTCCAGGCTCCAGGGGAAAAGCCCCCTGAAGCTGCCCCGAACACATCCTCGCCCCTATAATCGCATCACCGTGGAGTCAGCATTTGACAATCCAACTTATGAGACTGGAGTAAGTACCCATGCCAGCCTTGACACCTTATCCAGGACTCAGTTCTCTGCTCCCTCGGGCAGATACTCCCGAGGGCCCCACCAAAGCCTCTCTTTTTCCCTTTTCCTTGGGAAGGTGGACTGGGGCCTGGCAAATCTTATACAAGTTTCCAACTCCCAGCAGTCTCTTTCCTTTGCAGGAGATGAGAGAATATGA

Related Sequences

XP_004857097.1 Protein

Sez6 PREDICTED: seizure protein 6 homolog isoform X6 [Heterocephalus glaber]

Length: 1056 aa      View alignments
>XP_004857097.1
MRPAALLLLPSLLALVVHGLSSEPPTMGERQATGIKERDGELTAAPTPEQPERGVHFITTAPTLKLLNHHPLLEEFLQEGLETGEEELRPALPFQPTPFTPSPLTRLANQDSRPVFTSPTPAIAVAPTQPQPREGPWSLESELPVLRITAPLPPGPSLAVPTLYPGDRPSTTPPSRAWTPTQEGPGDMGRPWAPEAMSQTTGLGTESTITTSTASGDDEETTTTITIITTTITTVQPPGPCSWNFSGPEGFLDSPQAYSSPSDVGLDCFYYISVYPGYGVEIKVQNISLGEGETVAVEGLGGPDPLPLANQSFLLRGQVIRSPTHQAALRFQSLPPPAGPGTFHFHYQAYLLSCHFPRQPAYGDVTVTSLHPGGSARFHCATGYQLKGARLLTCLNATQPFWDSQEPVCIAACGGVIRNATTGRIVSPGYPGNYSNNLTCHWLLEAPESQRLHLHFEKVALAEDDDRLIIRNGDNVEAPPVYDSYEVEYLPIEGLLSSGRHFFVELSTDSSGAAAGMALRYEAFQQGHCYEPFVKYGNFSSSAPSYPVGTTVEFSCDPGYTLEQGSIIIECVDPHDPQWNETEPACRGGSPRIWNWREHRGDILPGLSCLPAVCSGEITDSAGVVLSPNWPEPYGRGQDCIWGVHVEEDKRIMLDIRVLRIGPGDVLTFYDGDDLTARVLGQYSGPRGHFKLFTSMADVTIQFQSDPGTSVLSYQQGFVIHFFEVPRNDTCPELPEIPNGWKNPSQPELVHGTVVTYQCYPGYQVVGSSVLMCQWDLSWSEDLPSCQRVTSCHDPGDVEHSRRLISSPRFPVGATVQYICDQGFVLTGSAILTCHDRQAGSPKWSDRAPKCLLEQLKPCYGLSAPKNGARSPEKRLHPAGATVHFSCAPGYVLKGQASIKCVPGHPSHWSDPPPICRAVAKAPATSSALDAAHIAAAIFLPLVAMGLLVGGVYLYFSRLQGKSPLKLPRTHPRPYNRITVESAFDNPTYETGVSTHASLDTLSRTQFSAPSGRYSRGPHQSLSFSLFLGKVDWGLANLIQVSNSQQSLSFAGDERI