Details from NCBI annotation

Gene Symbol Traf4
Gene Name TNF receptor-associated factor 4, transcript variant X2
Entrez Gene ID 101716536

Database interlinks

Part of NW_004624786.1 (Scaffold)

For more information consult the page for NW_004624786.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TRAF4 ENSCPOG00000025062 (Guinea pig)

Gene Details

TNF receptor-associated factor 4

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000018169, Guinea pig)

Protein Percentage 98.94%
CDS Percentage 94.33%
Ka/Ks Ratio 0.01958 (Ka = 0.0049, Ks = 0.2495)

TRAF4 ENSG00000076604 (Human)

Gene Details

TNF receptor-associated factor 4

External Links

Gene Match (Ensembl Protein ID: ENSP00000262395, Human)

Protein Percentage 98.3%
CDS Percentage 92.7%
Ka/Ks Ratio 0.02232 (Ka = 0.0077, Ks = 0.3466)

Traf4 ENSMUSG00000017386 (Mouse)

Gene Details

TNF receptor associated factor 4

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000017530, Mouse)

Protein Percentage 97.02%
CDS Percentage 89.79%
Ka/Ks Ratio 0.02567 (Ka = 0.0142, Ks = 0.5547)

Traf4 ENSRNOG00000013169 (Rat)

Gene Details

Tnf receptor associated factor 4 (Traf4), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000018468, Rat)

Protein Percentage 97.23%
CDS Percentage 89.57%
Ka/Ks Ratio 0.02289 (Ka = 0.0133, Ks = 0.5789)

Genome Location

Sequence Coding sequence

Length: 1413 bp    Location: 1314817..1321080   Strand: +
>XM_004857014.1
ATGCCTGGCTTCGACTATAAGTTCCTGGAGAAGCCCAAGCGGCGGCTCCTGTGCCCGCTGTGCGGGAAACCTATGCGCGAGCCCGTGCAGGTTTCGACCTGCGGCCACCGCTTCTGTGACACCTGCCTGCAAGAGTTTCTCAGTGAAGGAGTCTTCAAATGCCCTGAGGACCAACTTCCTCTGGACTATGCCAAGATCTATCCAGATCCAGAGCTGGAGGTCCAAGTATTAGGCCTGCCTATCCGCTGCATCCACAGTGAGGAGGGCTGCCGCTGGAGCGGGCCACTTCGACATCTACAGGGCCACCTGAATACCTGCAGCTTCAATGTAGTCCCCTGCCCCAATCGCTGCCCTACCAAGCTGAGTCGCCGTGATCTGCCTGCACACTTGCAGCACGACTGCCCCAAGCGGCGCCTCAAGTGCGAGTTCTGTGGCTGTGACTTCAGTGGGGAGGCCTATGAGACCCATGAGGGCATGTGCCCTCAAGAGAGTGTGTACTGTGAGAACAAGTGTGGTGCCCGCATGATGCGAAGACTGCTGGCCCAGCATGCCACCTCTGAGTGCCCTAAGCGTACCCAGGCTTGCACCTACTGTACCAAGGAGTTTGTCTTTGACACCATCCAGAGCCACCAGTACCAGTGCCCAAGGCTGCCTGTGCCCTGTCCCAACCAGTGTGGTGTGGGTACTGTGGCTCGGGAGGATCTACCAGGCCATCTGAAGGACAGCTGTAGCACTGCCTTGGTGCTGTGCCCATTCAAAGACTCCGGCTGCAAGCACAGGTGCCCTAAGCTTGCAATGGCACGGCACGTGGAGGACAGTGTGAAGCCACATCTGGCTATGATGTGTGCCCTGGTGAGCCGACAGAGGCAGGAGCTGCAGGAACTGAGGCGAGAGCTGGAGGAGCTATCTGTTGGCAGTGATGGGGTGCTCATCTGGAAGATTGGCAGCTATGGACGGCGGCTACAGGAGGCTAAGGCCAAACCTAACCTTGAGTGCTTCAGCCCAGCCTTCTACACACATAAGTATGGTTATAAGCTGCAAGTGTCTGCATTCCTCAATGGCAATGGCAGTGGCGAGGGCACACATCTCTCACTCTACATTCGTGTGCTGCCAGGTGCCTTTGACAATCTCCTTGAGTGGCCCTTTGCCCGCCGTGTCACCTTCTCCCTGCTGGATCAGAGTGACCCTGGGCTGGCTAAGCCACAACATGTCACTGAGACCTTCCACCCTGACCCAAACTGGAAGAATTTCCAAAAGCCGGGCACTTGGCGAGGTTCCCTGGATGAGAGTTCTCTGGGCTTTGGATATCCCAAGTTCATCTCCCACCAGGACATCCGAAAGCGAAACTATGTGCGAGATGATGCAGTATTCATCCGTGCCTCTGTTGAACTACCCCGGAAGATCCTCAGTTGA

Related Sequences

XP_004857071.1 Protein

Traf4 PREDICTED: TNF receptor-associated factor 4 isoform X2 [Heterocephalus glaber]

Length: 470 aa      View alignments
>XP_004857071.1
MPGFDYKFLEKPKRRLLCPLCGKPMREPVQVSTCGHRFCDTCLQEFLSEGVFKCPEDQLPLDYAKIYPDPELEVQVLGLPIRCIHSEEGCRWSGPLRHLQGHLNTCSFNVVPCPNRCPTKLSRRDLPAHLQHDCPKRRLKCEFCGCDFSGEAYETHEGMCPQESVYCENKCGARMMRRLLAQHATSECPKRTQACTYCTKEFVFDTIQSHQYQCPRLPVPCPNQCGVGTVAREDLPGHLKDSCSTALVLCPFKDSGCKHRCPKLAMARHVEDSVKPHLAMMCALVSRQRQELQELRRELEELSVGSDGVLIWKIGSYGRRLQEAKAKPNLECFSPAFYTHKYGYKLQVSAFLNGNGSGEGTHLSLYIRVLPGAFDNLLEWPFARRVTFSLLDQSDPGLAKPQHVTETFHPDPNWKNFQKPGTWRGSLDESSLGFGYPKFISHQDIRKRNYVRDDAVFIRASVELPRKILS