Details from NCBI annotation

Gene Symbol Foxn1
Gene Name forkhead box N1, transcript variant X2
Entrez Gene ID 101708703

Database interlinks

Part of NW_004624786.1 (Scaffold)

For more information consult the page for NW_004624786.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

FOXN1 ENSCPOG00000009810 (Guinea pig)

Gene Details

forkhead box N1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000008805, Guinea pig)

Protein Percentage 93.22%
CDS Percentage 92.76%
Ka/Ks Ratio 0.17482 (Ka = 0.034, Ks = 0.1947)

FOXN1 ENSG00000109101 (Human)

Gene Details

forkhead box N1

External Links

Gene Match (Ensembl Protein ID: ENSP00000226247, Human)

Protein Percentage 89.2%
CDS Percentage 87.91%
Ka/Ks Ratio 0.14607 (Ka = 0.0589, Ks = 0.403)

Foxn1 ENSMUSG00000002057 (Mouse)

Gene Details

forkhead box N1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000103929, Mouse)

Protein Percentage 87.04%
CDS Percentage 85.34%
Ka/Ks Ratio 0.12929 (Ka = 0.0689, Ks = 0.5327)

Foxn1 ENSRNOG00000010870 (Rat)

Gene Details

forkhead box N1 (Foxn1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000014672, Rat)

Protein Percentage 88.16%
CDS Percentage 85.34%
Ka/Ks Ratio 0.09787 (Ka = 0.0599, Ks = 0.6116)

Genome Location

Sequence Coding sequence

Length: 1950 bp    Location: 1114305..1127683   Strand: +
>XM_004856990.1
ATGGTTTCACTACTCCCGCCTCAGTCTGACATCGCACTGCCGGGCCCCACCAGACTGGAAGGGGAGCCGCAAGGGGACCTGATGCAGGCTCCGGGCCTCCCTGGCTCCCCTGCCCCACAGAGCAAGCATGCCGGTTTCAGCTGCTCATCATTTGTGCCTGAAGGCCCTCCCGAGAGGGCACCCTCGTTGCCCCCACACAGCCCAAGCATTGCATCACCAGGTCCTGAGCAACTCCAGGGTCACTGCCCAGCTGGCTCTGCCCTGGGGCCCTTCCGACTCTCACCCTCAGACAAGTATCCTGGCTTCAGCTTTGAAGAGGGCCCAGCGAGCAGCCCTGGGCTCTTCCTCAAGGGCAACCACTTGCCTTTCCACCCGTACAAGCGGCATTTCCACGAAGACATCTTCCCAGAGGCCCAGACTGCCCTGGCCCTTGATGGACACTCTTTTAAGACCCCGGGGTCCCTGGAGGCCTTTGAGGAGATCCCCGTGGATGTGGGGGAGGCCGAGGCCTTCCCGCCTGGCTTTGTGGCAGAGGCCTGGTGCAATGGACTCCCTTATCCCGGCCAGGAGCACAGCCAAGTCCTGCAGGGGTCAGAGGTCAAGGTCAAGCCCCCAGCTCTGGAGAGTGGTCCTGGAATGTACTGCTACCAGCCCCCTTTGCAGCACATGTACTGCCCCTCCCAGCCACCCTTCCACCAGTACTCACCAGCTGGTGGCAGCTACCCTGTTCCCTACCTGGGCTCCTCTCACTATCCATACCAGCGGATTGCACCACAGGCTAGCGCTGATGGGCACCAGCCGCTCTTCCCCAAGCCCATCTACTCCTACAGCATCCTCATCTTCATGGCCCTTAAGAACAGTAAAACTGGAAGCCTTCCTGTGAGCGAGATCTACAATTTTATGACAGAGCACTTCCCTTATTTCAAGACAGCACCTGATGGCTGGAAGAATTCTGTCCGCCACAACCTATCCCTCAACAAGTGCTTTGAGAAGGTAGAGAACAAATCTGGAAGTTCTTCTCGTAAGGGCTGCCTGTGGGCCCTCAATCCAGCCAAGATTGACAAGATGCAGGAGGAGCTGCAGAAGTGGAAGAGGAAGGACCCCATCGCTGTGCGAAAAAGCATGGCCAAGCCAGAAGAGCTGGACAGCCTCATTGGAGACAAGAGGGAGAAGCTGGGCTCCCCACTGCTGGGCTGTCCACCCCCCGGGCTGGGAGGCACAGGCCCCATCAGGCCCTTGGCACCCCCACCTGGGCTCTCTCAGCCACTGCATTCCATCCATCCAGCTCCAGGCCCTGTTCCTGGCAAGAATCCCCTGCAGGACCTACTTGGGGATCATTCACCCCCCTGCTATGGGCAGACATACCCTCACCTCTCACCTGGCCTGGCCCCTCCCGGACCCCTGCAGCAACCACTGTTCCCGCAGCCAGAAGGGCACCTTGAGCTGCGTGCCCAGCCAGGCACCCCCCAGGACTCACCTCTGCCTGCCCACACCCCACCCAGCAACTGTGCCAAGCTGCTGGCTGAGCCTTCCCCAGCCAAGACCATGCCTGACACCCTACTGCCAGATGGAGACCTTGGTACTGACCTGGATGCCATCAACCCCTCTCTCACTGACTTTGACTTCCAGGGAAACCTGTGGGAACAGCTGAAAGATGACAGCTTGGCCCTCGATCCCCTGGTACTGGTGACCTCGTCCCCAACATCATCCTCCATGCCGCCGCCCCTGCCACCACCTCACTGCTTCCCTCCAGGGCCTTGTCTGGCAGAGACAGGCAGTGGGGCAGGCGAATTGGCATCACCAGGCAGTGGGAACTCCGGAGGCCTGGGAGACCTGCCCCTCACCACCCTCTACTCGGCCTTCATGGAGCTGGAGCCCACACCCCACACGGCCCCTTCTGGCCCTGCTGTGTACCTCAGCCCCAGCTCCAAGCCCATGGCCCTGGCATGA

Related Sequences

XP_004857047.1 Protein

Foxn1 PREDICTED: forkhead box protein N1 isoform X2 [Heterocephalus glaber]

Length: 649 aa      View alignments
>XP_004857047.1
MVSLLPPQSDIALPGPTRLEGEPQGDLMQAPGLPGSPAPQSKHAGFSCSSFVPEGPPERAPSLPPHSPSIASPGPEQLQGHCPAGSALGPFRLSPSDKYPGFSFEEGPASSPGLFLKGNHLPFHPYKRHFHEDIFPEAQTALALDGHSFKTPGSLEAFEEIPVDVGEAEAFPPGFVAEAWCNGLPYPGQEHSQVLQGSEVKVKPPALESGPGMYCYQPPLQHMYCPSQPPFHQYSPAGGSYPVPYLGSSHYPYQRIAPQASADGHQPLFPKPIYSYSILIFMALKNSKTGSLPVSEIYNFMTEHFPYFKTAPDGWKNSVRHNLSLNKCFEKVENKSGSSSRKGCLWALNPAKIDKMQEELQKWKRKDPIAVRKSMAKPEELDSLIGDKREKLGSPLLGCPPPGLGGTGPIRPLAPPPGLSQPLHSIHPAPGPVPGKNPLQDLLGDHSPPCYGQTYPHLSPGLAPPGPLQQPLFPQPEGHLELRAQPGTPQDSPLPAHTPPSNCAKLLAEPSPAKTMPDTLLPDGDLGTDLDAINPSLTDFDFQGNLWEQLKDDSLALDPLVLVTSSPTSSSMPPPLPPPHCFPPGPCLAETGSGAGELASPGSGNSGGLGDLPLTTLYSAFMELEPTPHTAPSGPAVYLSPSSKPMALA