Details from NCBI annotation

Gene Symbol Vtn
Gene Name vitronectin, transcript variant X2
Entrez Gene ID 101705708

Database interlinks

Part of NW_004624786.1 (Scaffold)

For more information consult the page for NW_004624786.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

VTN ENSCPOG00000003156 (Guinea pig)

Gene Details

vitronectin

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000002860, Guinea pig)

Protein Percentage 80.17%
CDS Percentage 85.93%
Ka/Ks Ratio 0.33206 (Ka = 0.1122, Ks = 0.3379)

VTN ENSG00000109072 (Human)

Gene Details

vitronectin

External Links

Gene Match (Ensembl Protein ID: ENSP00000226218, Human)

Protein Percentage 77.73%
CDS Percentage 83.61%
Ka/Ks Ratio 0.31183 (Ka = 0.134, Ks = 0.4297)

Vtn ENSMUSG00000017344 (Mouse)

Gene Details

vitronectin

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000017488, Mouse)

Protein Percentage 77.17%
CDS Percentage 79.35%
Ka/Ks Ratio 0.17535 (Ka = 0.1387, Ks = 0.791)

Vtn ENSRNOG00000010031 (Rat)

Gene Details

vitronectin (Vtn), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000046415, Rat)

Protein Percentage 75.11%
CDS Percentage 77.43%
Ka/Ks Ratio 0.22722 (Ka = 0.1719, Ks = 0.7566)

Genome Location

Sequence Coding sequence

Length: 1596 bp    Location: 973337..970288   Strand: -
>XM_004856981.1
ATGGGGGCTGGGTTTGAGGTTAAGCAAACAGAGCAACAGAAAAGGCAGCTCCTCTCCTCCAGTTCCCTCCCTCCAACAGCAGAGCACAGACTTCAGGAGCTCAGAGCCCAGCTACCCAGGCCCTCAGCTAGAGGTCCTGCCATGGCACCCCTGAGGCCCCTTCTCATGCTGGCCCTGTTGGCATGGGTTGCTCTGGCCGACCAAGAGTCATGCAAGGGGCGCTGCACTGAGGGTTTCAACGCTGAGAAGAAGTGTCAGTGTGACGAGCTGTGCTCTTACTACCAGAGCTGCTGCAGTGACTACATGGCTGAGTGCAAGCCCCAAGTGACTCGTGGGGATGTATTCACTCGGGCGGAAGATGAGTATGGGTACTACGATTACCAGACCAAGGACAACACTGAGGACCACACACAGATGGAGAGCCCCTCCCCGACGACCGCTGTCTCCCAGTCCCAGTCTGAAGGCACTTCTGAGCCACCACCTGTCCTGAACCCTGAGAAAGAGTCTCCCACATTTGAAGCAAGCACTCTTGGGCCCAAGACAGAGACCTCAGGGCCCGAGGGGGTGAGCCTAAGGCCTGAGGCCACTGATCAAGGAGCCCTGGAGTCCCCTGCAGAGGAAGAGCTGTGTAGTGGGAAGCCCTTTGATGCCTTCACTGACCTCAAGAATGGCTCCATCTTTGCCTTCCGAGGAAAGTACTGCTATGAGCTAGATGAAACGGCAGTGAGGCCTGGGTACCCCAAGCTCATCCGAGATGTCTGGGGCATAGAGGGCCCCATTGATGCTGCCTTCACCCGCATCAACTGTCAGGGGAAGACCTACCTCTTCAAGGGTGGTCAGTACTGGCGCTTTGAGGATGGTGTCCTGGACCCCGATTTCCCTCGAAACATCTCTGAAGGCTTCAGTGGCATCCCGGACAACCTAGATGCAGCCTTGGCGCTCCCTGCCCACAGCTACAGTGGCCGGGAGCGGGTCTACTTCTTCAAGGGGAAACGGTACTGGGAGTATGAGTTCCAGCGCCAGCCTAGCCAGGAGGAGTGTGAAGGCAGCTCCTTGTCGGCTGTGTTTGAGCACTTTGCCCTGATGCAGCGGAACAGCTGGGAGGACATCTTTGAGTTGCTTTTCTGGGGCAGATCCTCTGGTGGTGTCAGAGAGCCTCAGTTCATCAGCCGAGACTGGCATGGTGTGCCTGGGAAAGTAGACGCTGCCATGCCTGGCCACATCTATGTCTCAGGGTCTGTGCTCCACTCTTCCGGGGCCAAGAAGCAAAAGTCTAGACGTCGCAGCCGCAAACGCTATCGTTCACGTGGTAGCCGAAGCCGCAGCCGCATCCAGAACGCCCACCGGCCATCCCGTTCCCTCTGGCTGTCCTTGTTCTCCAGTGAGGAGAGTGGGCTGGGAGTGGGCTATGATGACTACGAGATGAGTTGGGTTGTGCCTGCCACCTGCGAGCCCGTTCAGAGTGTCTACTTCTTCTCAGGAGACAAGTACTACCGAGTCAATCTTCGCACACGGCGAGTGGACACTGTGCACCCTCCCTACCCACGCTCCATTGCCCAGTACTGGCTGGGGTGCCCACCCCTGGACCGCCAGTAG

Related Sequences

XP_004857038.1 Protein

Vtn PREDICTED: vitronectin isoform X2 [Heterocephalus glaber]

Length: 531 aa      View alignments
>XP_004857038.1
MGAGFEVKQTEQQKRQLLSSSSLPPTAEHRLQELRAQLPRPSARGPAMAPLRPLLMLALLAWVALADQESCKGRCTEGFNAEKKCQCDELCSYYQSCCSDYMAECKPQVTRGDVFTRAEDEYGYYDYQTKDNTEDHTQMESPSPTTAVSQSQSEGTSEPPPVLNPEKESPTFEASTLGPKTETSGPEGVSLRPEATDQGALESPAEEELCSGKPFDAFTDLKNGSIFAFRGKYCYELDETAVRPGYPKLIRDVWGIEGPIDAAFTRINCQGKTYLFKGGQYWRFEDGVLDPDFPRNISEGFSGIPDNLDAALALPAHSYSGRERVYFFKGKRYWEYEFQRQPSQEECEGSSLSAVFEHFALMQRNSWEDIFELLFWGRSSGGVREPQFISRDWHGVPGKVDAAMPGHIYVSGSVLHSSGAKKQKSRRRSRKRYRSRGSRSRSRIQNAHRPSRSLWLSLFSSEESGLGVGYDDYEMSWVVPATCEPVQSVYFFSGDKYYRVNLRTRRVDTVHPPYPRSIAQYWLGCPPLDRQ