Details from NCBI annotation

Gene Symbol Ift20
Gene Name intraflagellar transport 20 homolog (Chlamydomonas), transcript variant X2
Entrez Gene ID 101703180

Database interlinks

Part of NW_004624786.1 (Scaffold)

For more information consult the page for NW_004624786.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

IFT20 ENSCPOG00000003153 (Guinea pig)

Gene Details

intraflagellar transport 20 homolog (Chlamydomonas)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000002857, Guinea pig)

Protein Percentage 99.24%
CDS Percentage 96.97%
Ka/Ks Ratio 0.01922 (Ka = 0.0032, Ks = 0.1644)

IFT20 ENSG00000109083 (Human)

Gene Details

intraflagellar transport 20 homolog (Chlamydomonas)

External Links

Gene Match (Ensembl Protein ID: ENSP00000464443, Human)

Protein Percentage 99.24%
CDS Percentage 94.19%
Ka/Ks Ratio 0.01359 (Ka = 0.0035, Ks = 0.2575)

Ift20 ENSMUSG00000001105 (Mouse)

Gene Details

intraflagellar transport 20

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000118015, Mouse)

Protein Percentage 98.48%
CDS Percentage 89.65%
Ka/Ks Ratio 0.02155 (Ka = 0.0112, Ks = 0.5219)

Ift20 ENSRNOG00000008891 (Rat)

Gene Details

intraflagellar transport 20 homolog (Chlamydomonas) (Ift20), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000011795, Rat)

Protein Percentage 100.0%
CDS Percentage 92.42%
Ka/Ks Ratio 0.001 (Ka = 0.0004, Ks = 0.3924)

Genome Location

Sequence Coding sequence

Length: 399 bp    Location: 931339..928123   Strand: -
>XM_004856974.1
ATGGCCAAAGACATCCTTGGTGAAGCCGGGTTGCACTTTGATGAGCTGAATAAGCTACGGGTGTTGGACCCAGAGGTTACCCAGCAGACCACAGAGCTCAAGGAAGAGTGCAAGGACTTTGTGGACAAAATTGGCCAGTTTCAGAAAATAGTTGGTGGCCTAATTGAGCTTGTTGACCAACTTGCAAAAGAAGCAGAAAATGAGAAGATGAAGGCCATTGGTGCTCGGAACCTGCTCAAATCTATAGCAAAGCAGAGAGAAGCCCAACAACAGCAACTTCAAGCACTAATAGCAGAAAAGAAAATGCAGCTAGAAAGGTATCGAGTTGAATATGAAGCTTTGTGTAAAGTAGAAGCAGAACAAAATGAATTTATCGACCAATTTATTTTTCAGAAATGA

Related Sequences

XP_004857031.1 Protein

Ift20 PREDICTED: intraflagellar transport protein 20 homolog isoform X2 [Heterocephalus glaber]

Length: 132 aa      View alignments
>XP_004857031.1
MAKDILGEAGLHFDELNKLRVLDPEVTQQTTELKEECKDFVDKIGQFQKIVGGLIELVDQLAKEAENEKMKAIGARNLLKSIAKQREAQQQQLQALIAEKKMQLERYRVEYEALCKVEAEQNEFIDQFIFQK