Sequence details NCBI ID: XM_004856969.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Lyrm9
Gene Name LYR motif containing 9, transcript variant X3
Entrez Gene ID 101700221

Database interlinks

Part of NW_004624786.1 (Scaffold)

For more information consult the page for NW_004624786.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ENSCPOG00000022126 (Guinea pig)

Gene Details

Uncharacterized protein

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000020375, Guinea pig)

Protein Percentage 91.03%
CDS Percentage 91.45%
Ka/Ks Ratio 0.17824 (Ka = 0.0442, Ks = 0.2479)

Lyrm9 ENSMUSG00000072640 (Mouse)

Gene Details

LYR motif containing 9

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000127853, Mouse)

Protein Percentage 93.59%
CDS Percentage 90.17%
Ka/Ks Ratio 0.06558 (Ka = 0.0293, Ks = 0.4475)

Lyrm9 ENSRNOG00000037204 (Rat)

Gene Details

LYR motif containing 9 (Lyrm9), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000053037, Rat)

Protein Percentage 93.59%
CDS Percentage 88.46%
Ka/Ks Ratio 0.04334 (Ka = 0.0291, Ks = 0.6719)

Genome Location

Sequence Coding sequence

Length: 267 bp    Location: 622728..618821   Strand: -
Raw sequence   
>XM_004856969.1
ATGCTGTTTTCCAGGACAGAGGTCTTGCTGATGGCCCCACTGCCAGGGGCAGAGCTGGTCCAGAGGCCGCTGCAGCTCTACAGATACTTGCTGCGCTGCTGCCGGCAGCTGCCCACCAAGGGCATCCAGGAGCACTACAGACATGCTGTCAGGCAGAGTTTCCGGGTTCATTCAGATGAAGACAACCCTGAGAGAATCCAGCAGATTATTAAAAGAGCCATCGAGGATGCGGACTGGATCATGAACAAATATAAAAAACAAAACTGA

Related Sequences

XP_004857026.1 Protein

Lyrm9 PREDICTED: LYR motif-containing protein 9 isoform X3 [Heterocephalus glaber]

Length: 88 aa      
>XP_004857026.1
MLFSRTEVLLMAPLPGAELVQRPLQLYRYLLRCCRQLPTKGIQEHYRHAVRQSFRVHSDEDNPERIQQIIKRAIEDADWIMNKYKKQN