Sequence details NCBI ID: XM_004856963.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Lgals9
Gene Name lectin, galactoside-binding, soluble, 9, transcript variant X1
Entrez Gene ID 101699033

Database interlinks

Part of NW_004624786.1 (Scaffold)

For more information consult the page for NW_004624786.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ENSCPOG00000022875 (Guinea pig)

Gene Details

Uncharacterized protein

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000017445, Guinea pig)

Protein Percentage 79.7%
CDS Percentage 85.77%
Ka/Ks Ratio 0.43557 (Ka = 0.1263, Ks = 0.29)

Lgals9 ENSMUSG00000001123 (Mouse)

Gene Details

lectin, galactose binding, soluble 9

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000103904, Mouse)

Protein Percentage 66.07%
CDS Percentage 75.0%
Ka/Ks Ratio 0.2848 (Ka = 0.2216, Ks = 0.7782)

Genome Location

Sequence Coding sequence

Length: 1014 bp    Location: 478050..491082   Strand: +
Raw sequence   
>XM_004856963.1
ATGGCTTTTTCTAGCCCCCAACCACCCTACGTGAGCCCGGCTGTTCCTTTTTCTGGGGTGATCCAAGGAGGTCTCCAGGAGGGTCTTCAGATCACTGTCCAGGGAACCATTCTTCACTCCAACACAAACAGGTTCTCGGTGAACTTCCAGACTGGCTTCAGTGACAATGACATTGCCTTCCACTTCAACCCACGGTTTGAAGAGGGAGGGTATGTTGTTTGCAATACAAAGCAGAAAGGAAATTGGGGGCCAGAGGAGAGGAAGATACAAATGCCTTTCCAGAAGGGGAAGGCCTTTGAGCTCTGCTTCCTGGTGCAGAGATCGGAGTTCAAGGTGATGGTGAACAAGAGATTCTTTGTGCAGTACCCACACCGAGTGCCCTTTCATCTTGCGGACACCATCTCTGTTGCTGGCCCTTTGCAGCTGTCCTACATCAGCTTCCAGAACTTCCCCGTGCAGCCTGCCTTCTCCATGCCACAATTCTCCCAGCCTGTGCGTTTCCCACAGAAGTCCAGGAGGTACAGACCGAAAACTCAACCCATCATGCACGGTATCCCTGGACTGGTGTTCTCTAATCCTGAACTATCACCTATAATGGACCCCAACCTAAACTATCCCATTCCTTACTTCACCTCCATCCCAGGTGGGCTGTTCCCATCTAGGGTCATCACTGTGTCCGGCATTATCCCACCCAATGCTAAGAGGTTCCACATCAACCTGCGCTGTGGGAGTGACGTTGCCTTCCACCTGAACCCACGTTTTGATCAAAACACTGTGGTCCGAAACACTCAGATCAAGGGCTGCTGGGGTTCAGAAGAGCGAAGCCTGCCCTTCAAAATGCCCTTCAGACAAGGCCAGGGCTTCTTGGTGGGGATCATATGCGAAGGTTACTGCTACAGGGTGACTGTGGATGGCCAATACCTGCTGGAATACACCCACCGCCTGAAGGACCTGAGGGCCATCAATAACCTAGAAGTGGCTGGTGACATTGAGCTGACCAATGTGCACACCTAG

Related Sequences

XP_004857020.1 Protein

Lgals9 PREDICTED: galectin-9 isoform X1 [Heterocephalus glaber]

Length: 337 aa      
>XP_004857020.1
MAFSSPQPPYVSPAVPFSGVIQGGLQEGLQITVQGTILHSNTNRFSVNFQTGFSDNDIAFHFNPRFEEGGYVVCNTKQKGNWGPEERKIQMPFQKGKAFELCFLVQRSEFKVMVNKRFFVQYPHRVPFHLADTISVAGPLQLSYISFQNFPVQPAFSMPQFSQPVRFPQKSRRYRPKTQPIMHGIPGLVFSNPELSPIMDPNLNYPIPYFTSIPGGLFPSRVITVSGIIPPNAKRFHINLRCGSDVAFHLNPRFDQNTVVRNTQIKGCWGSEERSLPFKMPFRQGQGFLVGIICEGYCYRVTVDGQYLLEYTHRLKDLRAINNLEVAGDIELTNVHT