Details from NCBI annotation

Gene Symbol T
Gene Name T, brachyury homolog (mouse), transcript variant X1
Entrez Gene ID 101710858

Database interlinks

Part of NW_004624785.1 (Scaffold)

For more information consult the page for NW_004624785.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

T ENSCPOG00000001358 (Guinea pig)

Gene Details

T, brachyury homolog (mouse)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000001231, Guinea pig)

Protein Percentage 96.09%
CDS Percentage 93.41%
Ka/Ks Ratio 0.07237 (Ka = 0.0187, Ks = 0.258)

T ENSG00000164458 (Human)

Gene Details

T, brachyury homolog (mouse)

External Links

Gene Match (Ensembl Protein ID: ENSP00000296946, Human)

Protein Percentage 90.8%
CDS Percentage 87.59%
Ka/Ks Ratio 0.07799 (Ka = 0.0446, Ks = 0.5717)

T ENSMUSG00000062327 (Mouse)

Gene Details

brachyury

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000074236, Mouse)

Protein Percentage 91.24%
CDS Percentage 86.33%
Ka/Ks Ratio 0.06621 (Ka = 0.0431, Ks = 0.6515)

Gene Details

brachyury (T), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000016471, Rat)

Protein Percentage 91.47%
CDS Percentage 87.4%
Ka/Ks Ratio 0.07939 (Ka = 0.0432, Ks = 0.5445)

Genome Location

Sequence Coding sequence

Length: 1308 bp    Location: 13058673..13066019   Strand: +
>XM_004856932.1
ATGAACTCCCCGGGCGCGGAGAGCTCGGGGAAGAGCCAGCAGTACCGCGTGGACCACCTGCTGAGCGCCGTGGAGAGTGAGCTGCAGGCCGGCAGCGAGAAGGGCGACCCCACCGAGCGCGAGCTGCGCGTGGGCCTGGAGGAGAGCGAGCTGTGGCTGCGCTTCAAGGAGCTCACCAACGAGATGATTGTGACCAAGAACGGCAGGAGAATGTTTCCAGTGCTGAAGGTGAACGTGTCCGGGCTGGACCCCAATGCCATGTACTCCTTCCTGCTGGACTTCGTGGCGGCCGACAACCACCGCTGGAAGTATGTGAATGGGGAGTGGGTTCCTGGGGGCAAGCCTGAGCCGCAGGCGCCCAGCTGCGTCTACATTCACCCCGACTCGCCCAATTTCGGGGCCCACTGGATGAAGGCCCCCGTCTCCTTCAGCAAAGTCAAGCTCACCAACAAGCTGAATGGAGGAGGCCAGATCATGTTGAACTCCTTACATAAGTACGAGCCTCGGATTCACATAGTGAGAGTCGGAGGTCCGCAGCGCATGATCACCAGCCACTGTTTTCCTGAGACCCAGTTCATAGCAGTGACTGCTTATCAGAATGAGGAGATCACAGCTCTTAAAATTAAATACAACCCATTTGCAAAAGCTTTTCTGGATGCAAAAGAAAGAAGTGATCACAAAGATGTGATGGAAGAAGCAGGGGACAGCCAACAGCCTGGATATTCCCAATGGGGCTGGCTTATTCCTGGAACCAGCACACTCTGCCCACCCGCCAGCCCCCACCCTCAGTTTGGAGGAGCCCTCTCTCTGCCTTCCACACATGGTTGTGAAAGGTACCCATCCCTGAGGAGCCACCGAGCAGCACCCTACCCCAGTCCCTACTCTCATCGGAACAACTCTCCAACCTACTCAGACAATTCATCTGCATGCCTGTCTGTGCTGCAATCCCATGACAACTGGTCCAGCCTTGGAGTACCCAGCCACACCAGTATGCTCCCCATGAGTCATAGTGCCAGCCCTTCCACTGGCCCTAGCCAGTATCCCAGCTTGTGGTCTGTGAGCAATGGCACCATCACTCCTGGCTCCCAGGCAGCAGGAGTGTCCAATGGGCTGGGGGCCCAGTTCTTCCGAGGATCCCCTGCACACTACCCATCCCTCTCGCATGCAGTCCCAGCTGCCTCATCCTCGAGCTCACCCTTGTATGAAGGGGCGGCCACTGTCACAGACATTCCTGATAGCCAGTATGACGCCTCGGCCCAAGGCCGCCTCATAGCCTCATGGACGCCTGTGTCGCCTCCTTCCATGTGA

Related Sequences

XP_004856989.1 Protein

T PREDICTED: brachyury protein isoform X1 [Heterocephalus glaber]

Length: 435 aa      View alignments
>XP_004856989.1
MNSPGAESSGKSQQYRVDHLLSAVESELQAGSEKGDPTERELRVGLEESELWLRFKELTNEMIVTKNGRRMFPVLKVNVSGLDPNAMYSFLLDFVAADNHRWKYVNGEWVPGGKPEPQAPSCVYIHPDSPNFGAHWMKAPVSFSKVKLTNKLNGGGQIMLNSLHKYEPRIHIVRVGGPQRMITSHCFPETQFIAVTAYQNEEITALKIKYNPFAKAFLDAKERSDHKDVMEEAGDSQQPGYSQWGWLIPGTSTLCPPASPHPQFGGALSLPSTHGCERYPSLRSHRAAPYPSPYSHRNNSPTYSDNSSACLSVLQSHDNWSSLGVPSHTSMLPMSHSASPSTGPSQYPSLWSVSNGTITPGSQAAGVSNGLGAQFFRGSPAHYPSLSHAVPAASSSSSPLYEGAATVTDIPDSQYDASAQGRLIASWTPVSPPSM