Details from NCBI annotation

Gene Symbol Nup43
Gene Name nucleoporin 43kDa
Entrez Gene ID 101724478

Database interlinks

Part of NW_004624785.1 (Scaffold)

For more information consult the page for NW_004624785.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

NUP43 ENSCPOG00000010815 (Guinea pig)

Gene Details

nucleoporin 43kDa

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000009710, Guinea pig)

Protein Percentage 95.24%
CDS Percentage 94.27%
Ka/Ks Ratio 0.14923 (Ka = 0.0265, Ks = 0.1778)

NUP43 ENSG00000120253 (Human)

Gene Details

nucleoporin 43kDa

External Links

Gene Match (Ensembl Protein ID: ENSP00000342262, Human)

Protein Percentage 90.79%
CDS Percentage 90.7%
Ka/Ks Ratio 0.15948 (Ka = 0.0476, Ks = 0.2986)

Nup43 ENSMUSG00000040034 (Mouse)

Gene Details

nucleoporin 43

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000046732, Mouse)

Protein Percentage 90.79%
CDS Percentage 88.33%
Ka/Ks Ratio 0.13442 (Ka = 0.0541, Ks = 0.4023)

Nup43 ENSRNOG00000049505 (Rat)

Gene Details

nucleoporin 43 (Nup43), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000066318, Rat)

Protein Percentage 89.49%
CDS Percentage 87.12%
Ka/Ks Ratio 0.1356 (Ka = 0.0606, Ks = 0.447)

Genome Location

Sequence Coding sequence

Length: 1143 bp    Location: 8329202..8343915   Strand: +
>XM_004856893.1
ATGGAGAGTATTTGTGCAAAGTTTGTGTCTCAAAAAATCAGCAAAACCCGCTGGCGACCGCTGCCTCCCGGGAGCCTGCAGACCCCGGAGACCTTTGCTACAGGATCTTGGGACAACGAGGACAATTATGTTTCACTGTGGTCTATTGGAGATTATGGAAATTTGGACTCTGATGGAGGGTTTGAAGGAGACCATCAGTTACTGTGTGATATCAGACACGATGGTGATGTCATGGATTTACAGTTTTTTGACCAGGAAAGAATTGTAGCTGCTTCTTCAACAGGATGTGTAACAGTTTTCCTTCACCATACAAATAATCAGACTTTATCAGTCAACCAGCAGTGGAAAACAGCTCACCACCATACAAATCCCAGTGGTCCTGTCTATAGAGGTGCACCATGTACAGGTATTGTGTGCGACAACCCAGAAATTGTCACAGTTGGAGAGGATGGTCGAATAAATCTCTTCAGAGTTGATCACAAGGAAACTGTAAGAACTATAGACAATGCAGATAGTAGTACACTCCATGCTGTAACCTTCCTTCGAACTCCTGAGATTGTTACAGTAAATTCAATTGGACAATTAAAAATATGGGATTTCAGACTACAAGGAAATGAGCCTGCTCAGATATTGTCACTGAATGGTGACCGAGTACCACTCCACTGTGTTGACAGACACCCCAACCAGCAGCATGTTGTAGCTACAGGTGGCCAGGATGGAATGTTGAGTATTTGGGATGTTCGACAAGGCACTATGCCTGTATCTCTGCTAAAGGCTCATGAAGCTGAAATGTGGGAAGTTCACTTTCACCCATCCAAACCAGATCATCTGTTCACTTGTTCTGAAGATGGATCCCTCTGGCACTGGGATGCCTCCATAGACATGCCGGAAAAATCCTCACTCTTTCACCAAGGAGGACGAACCAGTACATTTCTGTCTCATAGCATTAGTAATCAGGCTAATGTTCACCAGTCTGTGATAAGTTCCTGGCTCAGCACGGATCCTGCAAAAGACCAAATTGAAATCACAAGCTTGCTTCCTACCAGGACTCTGTCTGTGAACAGTTTGGATATTTTAGGTCCTTGTCTTGTTTGTGGGACTGATGCAGAAGCAATTTATGTTACCAGACAACTATTTTCATGA

Related Sequences

XP_004856950.1 Protein

Nup43 PREDICTED: nucleoporin Nup43 [Heterocephalus glaber]

Length: 380 aa      View alignments
>XP_004856950.1
MESICAKFVSQKISKTRWRPLPPGSLQTPETFATGSWDNEDNYVSLWSIGDYGNLDSDGGFEGDHQLLCDIRHDGDVMDLQFFDQERIVAASSTGCVTVFLHHTNNQTLSVNQQWKTAHHHTNPSGPVYRGAPCTGIVCDNPEIVTVGEDGRINLFRVDHKETVRTIDNADSSTLHAVTFLRTPEIVTVNSIGQLKIWDFRLQGNEPAQILSLNGDRVPLHCVDRHPNQQHVVATGGQDGMLSIWDVRQGTMPVSLLKAHEAEMWEVHFHPSKPDHLFTCSEDGSLWHWDASIDMPEKSSLFHQGGRTSTFLSHSISNQANVHQSVISSWLSTDPAKDQIEITSLLPTRTLSVNSLDILGPCLVCGTDAEAIYVTRQLFS