Details from NCBI annotation

Gene Symbol Snx9
Gene Name sorting nexin 9, transcript variant X2
Entrez Gene ID 101701892

Database interlinks

Part of NW_004624785.1 (Scaffold)

For more information consult the page for NW_004624785.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SNX9 ENSCPOG00000007921 (Guinea pig)

Gene Details

sorting nexin 9

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000007131, Guinea pig)

Protein Percentage 96.8%
CDS Percentage 95.29%
Ka/Ks Ratio 0.1119 (Ka = 0.0161, Ks = 0.144)

SNX9 ENSG00000130340 (Human)

Gene Details

sorting nexin 9

External Links

Gene Match (Ensembl Protein ID: ENSP00000376024, Human)

Protein Percentage 92.58%
CDS Percentage 90.95%
Ka/Ks Ratio 0.11112 (Ka = 0.0353, Ks = 0.318)

Snx9 ENSMUSG00000002365 (Mouse)

Gene Details

sorting nexin 9

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000002436, Mouse)

Protein Percentage 93.43%
CDS Percentage 88.27%
Ka/Ks Ratio 0.06309 (Ka = 0.0321, Ks = 0.5087)

Snx9 ENSRNOG00000046874 (Rat)

Gene Details

sorting nexin 9

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000066186, Rat)

Protein Percentage 87.69%
CDS Percentage 83.25%
Ka/Ks Ratio 0.11756 (Ka = 0.0816, Ks = 0.6941)

Genome Location

Sequence Coding sequence

Length: 1785 bp    Location: 373907..282833   Strand: -
>XM_004856831.1
ATGGCCTCCAAGGCTCGGGTTATGTATGATTTTGCTGCTGAGCCTGGAAATAATGAACTGACGGTTAGTGAAGGAGAAATCATCACAATTACAAATCCGGATGTTGGTGGAGGATGGCTGGAAGGAAGAAACAGCAAAGGAGAACGAGGACTTGTTCCCACCGACTATGTGGAAATTTTACCCAATGATGGAAAAGATCCGTTTTCTTGTGGAAATTCAGTGGCTGACCAAGCTTTCCTTGATTCCCTCTCAGCAAGTATCGCTCAAACCAGTTCATCAGCTGTCAATAGCAACAATCAGGTCAGCGGTGGCAGTGACCCCTGGTCAGCCTGGAATGCCCCCAAATCTGGGAACTGGGAGAGCTCAGATGGCTGGGGAGCCCGGCAAGAGGGGGCAGGCGCCCAGAAAAACACTGCCAACAACTGGGACACTGCCTTCGGACACCCCCAGGCCTACCAAGGCCCAGCAGCTGGTGATGACGATGAGTGGGATGAAGATTGGGATGACCCCAAGTCCTCTTCTCCTTACTTTAAGGATCCAGAATCCGCTGAAACAGGAGGTGTTCAGCGAGGGAACAGTCGTCCAGGTGCCTCCTCCATGAAGCTGCCACTTAACAAATTTCCTGGATTTGCAAAACCTGGAATGGAACAGTATTTGTTGGCCAAGCAGCTGGCAAAGCCCAAAGAGAAAATTCCCATCATTGTCGGAGATTATGGCCCAATGTGGGTTTATCCTACCTCAACATTTGACTGTGTGGTAGCAGATCCCAGGAAAGGCTCCAAAATGTATGGCCTGAAGAGCTACATTGAATACCAGTTAACACCTACTAACACTAATCGATCTGTAAACCACAGGTATAAGCACTTTGACTGGTTATATGAGCGTCTCCTGGTTAAGTTTGGGTCAGCCATTCCGATCCCTTCTCTTCCAGACAAGCAAGTCACAGGTCGCTTTGAAGAGGAATTTATCAAAATGCGCATGGAGAGACTTCAGGCCTGGATGACCAGGATGTGTCGGCACCCAGTCATCTCAGAGAGTGAAGTCTTCCAGCAGTTCCTGAACTTCCGAGATGAGAAGGAATGGAAAACTGGAAAGAGAAAGGCTGAGAAAGATGAGGTGGTGGGAGTTATGATATTTTCCACCATGGAACCAGAGGCACCTGACTTGGACTTAATAGAAATAGAACAGAAGTGCGAGGCTGTGGGCAAATTCACCAAGGCCATGGATGATGGTGTGAAGGAGCTGCTGACCGTGGGGCAGGAGCACTGGAAACGCTGCACGGGGCCATTGCCTAAGGAATATCAAAAGATAGGAAAGGCCTTGCAGAGCTTAGCAACAGTGTTTAGTTCTAGCGGTTATCAAGGTGAAACAGATCTCAATAATGCGATAACAGAAGCTGGAAAGACTTATGAAGAAATTGCCAGTCTCGTGGCAGAACAGCCAAAGAAAGATCTCCATTTCCTGATGGAATGTAACCATGAGTATAAAGGCTTTCTTGGCTGCTTCCCGGATATCATCGGTGCTCACAAGGGAGCAATAGAAAAAGTGAAAGAAAGTGATAAGCTGGTTGCAACTAGTAAAATCACTCCACAAGACAAGCAGACTATGGTTAAGCGAGTTGGCACCATGTCTTATGCTTTGCAAGCTGAGATGAATCACTTTCATAGTAACCGGATCTATGACTACAATAGCGTCATCCGTCTGTACCTGGAGCAGCAAGTGCACTTTTATGAAACGATTGCAGAAAAGCTGAGGCAGGCCCTCAGCCGCTTTCCAGTTATGTAG

Related Sequences

XP_004856888.1 Protein

Snx9 PREDICTED: sorting nexin-9 isoform X2 [Heterocephalus glaber]

Length: 594 aa      View alignments
>XP_004856888.1
MASKARVMYDFAAEPGNNELTVSEGEIITITNPDVGGGWLEGRNSKGERGLVPTDYVEILPNDGKDPFSCGNSVADQAFLDSLSASIAQTSSSAVNSNNQVSGGSDPWSAWNAPKSGNWESSDGWGARQEGAGAQKNTANNWDTAFGHPQAYQGPAAGDDDEWDEDWDDPKSSSPYFKDPESAETGGVQRGNSRPGASSMKLPLNKFPGFAKPGMEQYLLAKQLAKPKEKIPIIVGDYGPMWVYPTSTFDCVVADPRKGSKMYGLKSYIEYQLTPTNTNRSVNHRYKHFDWLYERLLVKFGSAIPIPSLPDKQVTGRFEEEFIKMRMERLQAWMTRMCRHPVISESEVFQQFLNFRDEKEWKTGKRKAEKDEVVGVMIFSTMEPEAPDLDLIEIEQKCEAVGKFTKAMDDGVKELLTVGQEHWKRCTGPLPKEYQKIGKALQSLATVFSSSGYQGETDLNNAITEAGKTYEEIASLVAEQPKKDLHFLMECNHEYKGFLGCFPDIIGAHKGAIEKVKESDKLVATSKITPQDKQTMVKRVGTMSYALQAEMNHFHSNRIYDYNSVIRLYLEQQVHFYETIAEKLRQALSRFPVM