Details from NCBI annotation

Gene Symbol Synj2
Gene Name synaptojanin 2, transcript variant X2
Entrez Gene ID 101700219

Database interlinks

Part of NW_004624785.1 (Scaffold)

For more information consult the page for NW_004624785.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SYNJ2 ENSCPOG00000009144 (Guinea pig)

Gene Details

synaptojanin 2

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000008210, Guinea pig)

Protein Percentage 94.0%
CDS Percentage 92.79%
Ka/Ks Ratio 0.14486 (Ka = 0.0311, Ks = 0.2144)

SYNJ2 ENSG00000078269 (Human)

Gene Details

synaptojanin 2

External Links

Gene Match (Ensembl Protein ID: ENSP00000347792, Human)

Protein Percentage 87.02%
CDS Percentage 86.26%
Ka/Ks Ratio 0.15978 (Ka = 0.0721, Ks = 0.4511)

Synj2 ENSMUSG00000023805 (Mouse)

Gene Details

synaptojanin 2

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000111457, Mouse)

Protein Percentage 86.02%
CDS Percentage 84.16%
Ka/Ks Ratio 0.13992 (Ka = 0.0797, Ks = 0.5698)

Synj2 ENSRNOG00000017114 (Rat)

Gene Details

synaptojanin 2 (Synj2), transcript variant 2, mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000062564, Rat)

Protein Percentage 86.01%
CDS Percentage 83.24%
Ka/Ks Ratio 0.12995 (Ka = 0.0833, Ks = 0.6406)

Genome Location

Sequence Coding sequence

Length: 4335 bp    Location: 265849..159935   Strand: -
>XM_004856827.1
ATGGCCCTGAGCAAAGGGCTGCGGCTGCTCGCGCGGCTGGAGGCCTCGGGCGAGAGCAGCGTGCTGCTGGAGGCGCGCGGCCGCGGCGACTGCCTGCTCTTCGAGGCCGGCACGGTGGCCACGCTGGCTCCTGAAGAGAAAGAAGTCATTAAAGGACAGTATGGCAAGCTCACGGACGCTTACGGCTGCCTCGGGGAGCTCAGGTTAAAATCCGGTGGTGCTTCTCTGAGTTTCCTGGTGTTGGTGACAGGCTGCACATCAGTGGGCAGAATTCCAGATGCGGAAATCTACAAAATCACCGCCACCGAGTTTTATCCTCTGCAGGAAGAGGCCCGGGAGGAGGACCGCCTGCTGGCCCTGAGGAAGATCCTCAGCTCGGGGGTGTTTTATTTCTCGTGGCCCAATGATGGCTCCCGGTTTGACCTGACTGTCCGGGTGCAGAAGCAGGGTGATGACAGCTCTGAGTGGGGGAACGCCTTCTTCTGGAACCAGCTATTGCACATGCCCCTGCGGCAGCACCAGGTGAGCTGCTGTGACTGGCTGCTGAAGGTCATCTGTGGCGTGGTGGCCATTCGCACAGTGTATGCCTCGCACAAGCAGGCCAAGGCCTGTCTCATCTCCCGAATCAGCTGTGAGCGTGCCGGTGCTCGCTTCCATACCCGTGGCGTGAATGATGATGGCCATGTGTCCAACTTTGTGGAGACAGAGCAGACGATTTACATGGATGATGGAGTCTCATCTTTTATCCAGATCAGAGGGTCGGTTCCGCTGTTTTGGGAGCAGCCAGGGCTTCAGGTTGGCTCTCATCATCTGAGGCTTCACAGAGGCCTGGAGGCCAACGCCCCTGCTTTCGACAGGCACATGGTGTTTCTGAAGGAGCAGTATGGGAAACAGGTGGTTGTGAACCTGCTGGGAAGCAGAGGTGGAGAGGAGGTGCTCAACAGGGCCTTCAAGAAGTTGCTCTGGGCTTCCTGCCACGCTGTTGACACACCTATGATAAATTTTGACTTATATCAGTTCGCCAAAGGCGGGAAGCTAGAGAAATTGGAGAACCTGTTGAGGCCTCACTTAAAGCTGCACTGGGACGACTTTGATGTGTTCACGAAGGGCGAGAATGTAAGTCCACGTTTCCAGAAAGGCACTTTGCGGATGAACTGTCTTGACTGCTTGGATCGAACCAACACCGTGCAGAGCTTCATCGCGCTGGAGGTCCTTCATCTGCAACTCGAGAGCCTGAGGCTGAATTCAAAGCCCATTGTTGAGCGCTTCGTGGAGTCCTTCAAAGCCATGTGGTCCCTGAATGGACACAGCCTGAGCAAGGTGTTCACAGGCAGCAGAGCCCTGGAGGGGAAGGCCAAGGTGGGGAAGCTGAAGGATGGCGCCCGGTCCATGTCTCGTACCATCCAGTCCAACTTCTTCGATGGGGTGAGGCAGGAGGCCATCAGACTGCTGCTGGTGGGAGATGTCTACAACGAGGAATCAACAGACAAAGGGAGGATGCTCCTGGACAACACAGCCCTTCTGGTGACTCCCAGGATCCTGAAAGCCATGACAGAGCGACAGTCAGAATTCACAAATTTCAAGCGGATCCAAATCGCTGTGGGGACCTGGAATGTGAATGGAGGAAAGCAGTTCCGGAGCAACCTCCTGGGGACAGCAGAGCTCACAGACTGGCTGCTCGATGCACCTCAGCTCACTGGAGCAGTGAACTCTGAGGATGACAGCAGCCCGGCTGACATGTTTGCTGTGGGGTTTGAGGAAATGGTGGAACTGAGTGCAGGGAATATTGTCAATGCCAGTACCACCAACAGGAAGATGTGGGGGGAGCAGCTTCAGAAAGCCATCTCACGCTCCCATAGGTACATTCTCCTGACTTCGGCACAGCTGGTGGGCGTCTGTCTTTACATCTTTGTGCGCCCATACCATGTCCCATTCATCAGGGACGTGGCTGTCGACACAGTGAAGACTGGCATGGGGGGCAAAGCAGGAAACAAGGGTGCTGTGGGCATCCGCTTTCAGTTCCACAGCACCAGCTTCTGCTTCATCTGCAGCCACCTGACGGCTGGGCAGTCGCAGGTGAAGGAGAGGAACGAGGACTACAGGGAGATCACCCACAGGCTGTCCTTCCCCGCGGGGAGAAATGTGTTTTCTCACGATTATGTGTTTTGGTGTGGCGATTTCAACTACCGCATTGATCTTACTTACGAGGAAGTCTTCTATTTTGTTAAACGCCAAGACTGGAAGAAACTTCTGGAATTTGATCAGCTACAGCTGCAGAAATCAAGTGGAAAAATTTTTAAAGACTTTCATGAAGGAGCCATTAATTTTGGACCCACCTACAAATATGACGTTGGCTCCGCTGCCTACGATACAAGTGACAAATGCCGCACCCCGGCCTGGACAGATAGAGTGCTGTGGTGGAGGAAGAAGCACCCTTTCGATAAAACAGCTGGAGAAATCAACCTTCTAGACAACGATCTGGACAGCGACACCAAAGTAAGACACACCTGGTCTCCCGGCACCCTCAGGTACTATGGTCGTGCAGAGCTGCAAGCATCTGATCACAGACCCGTGCTGGCCATTGTGGAAGTAGAAGTGCAAGAAGTCGACATATGTGCTCGGGAGAGGGTTTTCCAGGAAGTGTCCTCTTTCCAGGGCCCTTTGGATGCCACCGTTGTTGTAAACCTTCAGTCGCCAACTCTAGAAGAGAAGAATGAGTTTCCTGAGGACCTGCGTACTGAACTCATGCAGACCTTGGGGAATTATGGGACAATTGTCCTTGTCAGGATCAACCAGGGGCAGATGCTGGTGACTTTTGCAGATAGTCACTCAGCTCTCAGCGTCCTGGATGTAGATGGTATGAAGGTGAAAGGCAGAGCGGTGAAGATTAGACCCAAGACGAAAGACTGGCTGAAAGGTTTGCGAGAGGAGCTCATTCGAAAACGGGACAGCATGGCTCCCGTGTCCCCCACTGCCAATTCCTGTTTGCTGGAGGAAAACTTCGACTTCACGAGTTTGGACTATGAGTCAGAAGGGGATGTTCTAGAAGATGACGAAGACTATTTAGTGGATGAACTCAGGCAGCCTGTGGTCTCAGACAGTGAACTGGGGGGAGATGATCCTCCTGATGCCCCCAGCTTCACAGCAGTGGCACCTGCCAGCAAGTCACCTGCCCTGATCAAAAAGAAGCAGCGTCCGACATACAAAGCTGGTTTGATGGTGAAGAAGTCAGCTTCAGATGTGTCCATCTCCTCCGGCACCCATGGGCAGTATTCGATTTTGCAGGCAGCAAAACCTCTGCCAGGAGCACCTCAACAACCGCCCAAAGCTAGAACTGGAATAAGCAAACCTTACAATGTCAAGCAGATCAAAACCACCAATGCTCAGGAGGCAGAAGCAGCAATCCGATGTCTCCTGGAGGCCAGAGGAGGCACTCCAGAAGAAGCTGTAAATGCCACAGCCCTGAGGGACCAAGGGTCCTCCAAACCAGAGCCCTCCCTGGGACCCCCACTCTTGCCCTGTCGCCCAGCACCCAGGGTTCCTGCCATCAAGAAGCCAATGTTAAGGAGGACAGGAAAGCCCACGTCACTGGAAGAACAGTCTGAGGAAAACCCTATCCATTTTACAGTCGGGCCCCCAGAGACAAGCCTTGAAACACCCCCTCCAGTGACACCCCCTCGAGTCCCTCCTGTTCCCAAGCCGAGAACATTTCAGCCCAGGAAAGATGTGGAGAGAAGGCCCAGCAGGGGAAAGCCAGGACCAGATGAAGCCCCTCTTGTGGCAGAAGCCACCATGCTGCCCGCTCCAGAGGTCCCATCTCTGGTGCCCAAGGTGCCCCCAAGAAGGAAGAAATCTGCACCAGCTGCTTTCCACCTACAGGTCCTGCAGAGCAACAGCCAGCTTCTCCAGGGCCTCCCAGCCAGCAGTGATGGGGGCAGGTGTTCACCGGGACCCCAGCTGGAAACCGACACTCTCTTCCCACAAGTGGATTTTCTAGGCACTTCATCTGCCCCAAGCCCTGAAACTAATGGCCCCAGGGTAATGAAGCCAGGAGCAGCCTCCCTTGGTGGAGATTATCAGGACCCCTTCTGGAACCTTCTCCACCACCCTAAACTATTGAATAATGCCTGGCTTTCCAAGAGCTCTGACCCTTTGGGCCCCAAAGCCAGAAGCTCTGAGAGGGCACAGACAGACCCAGTGCAGCTCAGTACTTCTGTTGCCGAGGAGCAGCTGCTCTCAGACCATGGGGGGAAAGCCTTTAACCACTGGGTGACTATCAGTGACAAAGACAAGAGAACAACACTGCAGGTGTTTGACCCACTGGCAAAAACATGA

Related Sequences

XP_004856884.1 Protein

Synj2 PREDICTED: synaptojanin-2 isoform X2 [Heterocephalus glaber]

Length: 1444 aa      View alignments
>XP_004856884.1
MALSKGLRLLARLEASGESSVLLEARGRGDCLLFEAGTVATLAPEEKEVIKGQYGKLTDAYGCLGELRLKSGGASLSFLVLVTGCTSVGRIPDAEIYKITATEFYPLQEEAREEDRLLALRKILSSGVFYFSWPNDGSRFDLTVRVQKQGDDSSEWGNAFFWNQLLHMPLRQHQVSCCDWLLKVICGVVAIRTVYASHKQAKACLISRISCERAGARFHTRGVNDDGHVSNFVETEQTIYMDDGVSSFIQIRGSVPLFWEQPGLQVGSHHLRLHRGLEANAPAFDRHMVFLKEQYGKQVVVNLLGSRGGEEVLNRAFKKLLWASCHAVDTPMINFDLYQFAKGGKLEKLENLLRPHLKLHWDDFDVFTKGENVSPRFQKGTLRMNCLDCLDRTNTVQSFIALEVLHLQLESLRLNSKPIVERFVESFKAMWSLNGHSLSKVFTGSRALEGKAKVGKLKDGARSMSRTIQSNFFDGVRQEAIRLLLVGDVYNEESTDKGRMLLDNTALLVTPRILKAMTERQSEFTNFKRIQIAVGTWNVNGGKQFRSNLLGTAELTDWLLDAPQLTGAVNSEDDSSPADMFAVGFEEMVELSAGNIVNASTTNRKMWGEQLQKAISRSHRYILLTSAQLVGVCLYIFVRPYHVPFIRDVAVDTVKTGMGGKAGNKGAVGIRFQFHSTSFCFICSHLTAGQSQVKERNEDYREITHRLSFPAGRNVFSHDYVFWCGDFNYRIDLTYEEVFYFVKRQDWKKLLEFDQLQLQKSSGKIFKDFHEGAINFGPTYKYDVGSAAYDTSDKCRTPAWTDRVLWWRKKHPFDKTAGEINLLDNDLDSDTKVRHTWSPGTLRYYGRAELQASDHRPVLAIVEVEVQEVDICARERVFQEVSSFQGPLDATVVVNLQSPTLEEKNEFPEDLRTELMQTLGNYGTIVLVRINQGQMLVTFADSHSALSVLDVDGMKVKGRAVKIRPKTKDWLKGLREELIRKRDSMAPVSPTANSCLLEENFDFTSLDYESEGDVLEDDEDYLVDELRQPVVSDSELGGDDPPDAPSFTAVAPASKSPALIKKKQRPTYKAGLMVKKSASDVSISSGTHGQYSILQAAKPLPGAPQQPPKARTGISKPYNVKQIKTTNAQEAEAAIRCLLEARGGTPEEAVNATALRDQGSSKPEPSLGPPLLPCRPAPRVPAIKKPMLRRTGKPTSLEEQSEENPIHFTVGPPETSLETPPPVTPPRVPPVPKPRTFQPRKDVERRPSRGKPGPDEAPLVAEATMLPAPEVPSLVPKVPPRRKKSAPAAFHLQVLQSNSQLLQGLPASSDGGRCSPGPQLETDTLFPQVDFLGTSSAPSPETNGPRVMKPGAASLGGDYQDPFWNLLHHPKLLNNAWLSKSSDPLGPKARSSERAQTDPVQLSTSVAEEQLLSDHGGKAFNHWVTISDKDKRTTLQVFDPLAKT