Details from NCBI annotation

Gene Symbol Pdzd3
Gene Name PDZ domain containing 3, transcript variant X2
Entrez Gene ID 101707271

Database interlinks

Part of NW_004624784.1 (Scaffold)

For more information consult the page for NW_004624784.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PDZD3 ENSCPOG00000022891 (Guinea pig)

Gene Details

PDZ domain containing 3

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000014360, Guinea pig)

Protein Percentage 88.05%
CDS Percentage 90.11%
Ka/Ks Ratio 0.29971 (Ka = 0.0669, Ks = 0.2231)

PDZD3 ENSG00000172367 (Human)

Gene Details

PDZ domain containing 3

External Links

Gene Match (Ensembl Protein ID: ENSP00000347742, Human)

Protein Percentage 82.97%
CDS Percentage 86.01%
Ka/Ks Ratio 0.31583 (Ka = 0.1036, Ks = 0.3282)

Pdzd3 ENSMUSG00000032105 (Mouse)

Gene Details

PDZ domain containing 3

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000034618, Mouse)

Protein Percentage 80.92%
CDS Percentage 82.93%
Ka/Ks Ratio 0.25806 (Ka = 0.119, Ks = 0.4613)

Pdzd3 ENSRNOG00000008526 (Rat)

Gene Details

PDZ domain containing 3 (Pdzd3), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000011582, Rat)

Protein Percentage 80.92%
CDS Percentage 83.47%
Ka/Ks Ratio 0.27439 (Ka = 0.1186, Ks = 0.4324)

Genome Location

Sequence Coding sequence

Length: 1518 bp    Location: 14564102..14568587   Strand: +
>XM_004856784.1
ATGGAGGCAGCTGCAGATCTTCAGGACACGGCATCATTAACTGTGAAGTTTAAATTTAACCCAAAGTTGGGCATTGACAATCCGGTCCTCTCCCTGGCCGAAGACTACAACTGCTCTGATCCCTGGAATTTGCATCGGCCTCGCTTCTGTCTGTTGAGCAAAGAGGAAGGCAGGAGTTTTGGTTTTCACCTTCAGCAGCAGCTGGGCAGGGCTGGGCATGTGGTGTGCAGAGTGGAGCCAGGCACCTCTGCCCACTGCCAAGGTCTCCAGGAAGGAGATCAGATTCTGGCAGTGAACAACAATGTTGTGGAGCACGAGGACCATGTGGTGGTGGTGCGTCACATCCGGGCCAGCGGTCCCCGGGTGTTGCTGACAGTCTTGGCGAGGCATGTCTATGATGCAGTCCGAGCTCAGCAGGGGAACGATACCCACCTCTGTCCTGTCCTAGGCTCAGGGGTCCGGCCCCGGCTGTGCCATGTAGTGAAAGATGAGGGTGGCTTTGGCTTCAGTGTCACTCACGGAGCTCAAGGTCCTTTCTGGCTGGTGCTAAGTACAGGGGGAGCAGCTGAACGGGCAGGGGTGCCCCCTGGGGCCCGGCTGCTGGAAGTGAATGGAGTCAGTGTGGAGAAGTTCACTCATTACCAGCTCAGCAGGAAGCTTTGGCAGAGTGGAAAGCAGGTGACTCTGCTGGTGGCAGGGCCAGAGGTGGAGGATCAGTGTCGCCAGCTGGGAATGCCCCTAGCTGCACCCCTGGCAGAAGGCTGGACACTGCCTGCCAAGCCCCGTTGTCTACACCTAGAGAAGGGGCCCAAGGGCTTTGGGTTCCTGCTCCGGGAGGAGAAGGGCATTGATGGCCGACTTGGGCAGTTCCTTCGGGAGGTGGACCCAGGACTGCCAGCTGAGAAGGCTGGGATGCGGGCAGGGGACCGGCTGGTGGCTGTGGCTGGGGAGAGTGTGGAGGAGCTGGGCCACGGGGAGACTGTATCCCGGATCCGAGAGCAGGGCTCTCGTGTTTCCCTCACTGTCGTCGACCCTGAGGCTGACCGCTTCTTCAGCATGGTTCGCCTGTCCCCACTCCTCTTCTTGGAGAGCACAGAGCCTGCTGCCTCCCCGAAGGCCACTGACTTGACCTCTCCAGTTGAGACTGAGAACCGACCAGTGGAACACAAAGCTGGGTCTCCTGGTCCTCCTGGCTCCTGCCAGTGCTTCCTGTACCCTGGGCCTGGTGGTGGCTATGGCTTCCGACTCAGCTGTGTGACCAGTGGGCCTTGTCTCTTCATCTCTCAGGTGACCCCTGGAGGCTCAGCTGCCCAGGCAGGGCTGCAAATGGGAGACGTGGTTCTGGAGGTGAACGGGTATCCCGTGGGTGGTGATAGTGACCTGGAAAGGCTTCAGCAGCTGGCTGAAGCTGAGCCACCCCTCTGCCTGACGCTGGCAGCCAGGTCTCAAGAGGGCTTGGAAGCCTGGATTCCCCCAGGGTATGGAGAGGACCGGGCTCTGGCCTCAGATCTGCTGTAG

Related Sequences

XP_004856841.1 Protein

Pdzd3 PREDICTED: Na(+)/H(+) exchange regulatory cofactor NHE-RF4 isoform X2 [Heterocephalus glaber]

Length: 505 aa      View alignments
>XP_004856841.1
MEAAADLQDTASLTVKFKFNPKLGIDNPVLSLAEDYNCSDPWNLHRPRFCLLSKEEGRSFGFHLQQQLGRAGHVVCRVEPGTSAHCQGLQEGDQILAVNNNVVEHEDHVVVVRHIRASGPRVLLTVLARHVYDAVRAQQGNDTHLCPVLGSGVRPRLCHVVKDEGGFGFSVTHGAQGPFWLVLSTGGAAERAGVPPGARLLEVNGVSVEKFTHYQLSRKLWQSGKQVTLLVAGPEVEDQCRQLGMPLAAPLAEGWTLPAKPRCLHLEKGPKGFGFLLREEKGIDGRLGQFLREVDPGLPAEKAGMRAGDRLVAVAGESVEELGHGETVSRIREQGSRVSLTVVDPEADRFFSMVRLSPLLFLESTEPAASPKATDLTSPVETENRPVEHKAGSPGPPGSCQCFLYPGPGGGYGFRLSCVTSGPCLFISQVTPGGSAAQAGLQMGDVVLEVNGYPVGGDSDLERLQQLAEAEPPLCLTLAARSQEGLEAWIPPGYGEDRALASDLL