Details from NCBI annotation

Gene Symbol Upk2
Gene Name uroplakin 2, transcript variant X2
Entrez Gene ID 101724710

Database interlinks

Part of NW_004624784.1 (Scaffold)

For more information consult the page for NW_004624784.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

UPK2 ENSCPOG00000002222 (Guinea pig)

Gene Details

uroplakin 2

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000002015, Guinea pig)

Protein Percentage 86.41%
CDS Percentage 87.32%
Ka/Ks Ratio 0.19149 (Ka = 0.0731, Ks = 0.3819)

UPK2 ENSG00000110375 (Human)

Gene Details

uroplakin 2

External Links

Gene Match (Ensembl Protein ID: ENSP00000264031, Human)

Protein Percentage 85.87%
CDS Percentage 87.14%
Ka/Ks Ratio 0.20964 (Ka = 0.0773, Ks = 0.3687)

Upk2 ENSMUSG00000041523 (Mouse)

Gene Details

uroplakin 2

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000040481, Mouse)

Protein Percentage 86.41%
CDS Percentage 82.43%
Ka/Ks Ratio 0.11435 (Ka = 0.0824, Ks = 0.7205)

Upk2 ENSRNOG00000043324 (Rat)

Gene Details

uroplakin 2 (Upk2), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000016303, Rat)

Protein Percentage 86.41%
CDS Percentage 82.61%
Ka/Ks Ratio 0.12009 (Ka = 0.0852, Ks = 0.7092)

Genome Location

Sequence Coding sequence

Length: 555 bp    Location: 14356600..14358689   Strand: +
>XM_004856739.1
ATGGCTTCCTTGCTGCCTGTCCACACCTTGCCCTTGATGCTGATTCTGCTGGCTATCCTGGCCCCCGGGGCTGCAGAATTCAACATCTCAAACCTGTCTGGTCTGCTGTCCCCAGCACTAGCGGAGAGCCTGCTGGTTGCCTTGCCCCCTTGTCACCTTACAGGAGGCAACGCCACGCTGATGGTCCGGAGAGCCAATGACAGCAAAGTGGTGAACTCCAGCTTCGTGGTCCCTCCATGCCGAGGGCGCAGGGAGCTGGTGAGTGTGATGGACAGTGGGGCCGGCTTCACAGTCACTAGGCTGAGTGCGTACCAGGTGACAAACCTCCATCCAGGAACCAAATACTACATTTCCTATCAAGTGCAGAAGGGGTCATCTACTGAATCCAGCCAAGAGATCCCAATGTCCACGCTTCCTCGTAAGAATATGGAGTCCATTGGGCTGGGAATGGCCCGAACAGGGGGCATGGTGGTCATCACAGTGCTGCTGTCCATCAGCATGTTCGTTCTGGTTGTGGGCCTCATCATCACCCTGGCACTGGGCACCCGGAAGTGA

Related Sequences

XP_004856796.1 Protein

Upk2 PREDICTED: uroplakin-2 isoform X2 [Heterocephalus glaber]

Length: 184 aa      View alignments
>XP_004856796.1
MASLLPVHTLPLMLILLAILAPGAAEFNISNLSGLLSPALAESLLVALPPCHLTGGNATLMVRRANDSKVVNSSFVVPPCRGRRELVSVMDSGAGFTVTRLSAYQVTNLHPGTKYYISYQVQKGSSTESSQEIPMSTLPRKNMESIGLGMARTGGMVVITVLLSISMFVLVVGLIITLALGTRK