Details from NCBI annotation

Gene Symbol Arcn1
Gene Name archain 1
Entrez Gene ID 101717582

Database interlinks

Part of NW_004624784.1 (Scaffold)

For more information consult the page for NW_004624784.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ARCN1 ENSCPOG00000023815 (Guinea pig)

Gene Details

archain 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000019155, Guinea pig)

Protein Percentage 98.43%
CDS Percentage 96.28%
Ka/Ks Ratio 0.07247 (Ka = 0.0085, Ks = 0.1177)

ARCN1 ENSG00000095139 (Human)

Gene Details

archain 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000264028, Human)

Protein Percentage 97.65%
CDS Percentage 94.72%
Ka/Ks Ratio 0.05835 (Ka = 0.0111, Ks = 0.1903)

Arcn1 ENSMUSG00000032096 (Mouse)

Gene Details

archain 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000034607, Mouse)

Protein Percentage 98.24%
CDS Percentage 92.89%
Ka/Ks Ratio 0.027 (Ka = 0.0082, Ks = 0.3034)

Arcn1 ENSRNOG00000013843 (Rat)

Gene Details

archain 1 (Arcn1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000018598, Rat)

Protein Percentage 98.04%
CDS Percentage 92.5%
Ka/Ks Ratio 0.0289 (Ka = 0.0092, Ks = 0.3171)

Genome Location

Sequence Coding sequence

Length: 1536 bp    Location: 13973653..14011921   Strand: +
>XM_004856716.1
ATGGTGCTGTTGGCAGCCGCAGTCTGCACGAAAGCAGGAAAGGCTATTGTTTCTCGACAGTTTGTGGAAATGACCCGAACCCGGATTGAGGGCTTATTAGCAGCTTTCCCAAAGCTCATGAACACTGGAAAACAACATACATTTGTTGAAACAGAGAGTGTAAGATATGTCTACCAGCCTATGGAGAAACTGTACATGGTACTGATCACTACCAAAAACAGCAACATTTTAGAAGATTTGGAGACCTTAAGGCTTTTCTCAAGAGTGATTCCTGAATATTGCCGAGCCTTAGAAGAAAATGAAATATCTGAGCACTGTTTTGATTTGATATTTGCTTTTGATGAAATTGTTGCCTTGGGATATCGGGAGAATGTTAACCTGGCACAGATCAGAACCTTCACAGAAATGGATTCTCATGAGGAGAAAGTGTTCAGAGCAGTCAGAGAGACTCAAGAACGTGAAGCTAAGGCTGAGATGCGGCGTAAAGCAAAAGAATTACAACAGGCCCGAAGAGATGCAGAGAGACAGGGCAAAAAAGCACCAGGATTTGGGGGATTTGGTAGCTCTGCAGTTTCTGGAGGCAGCACAGCTCCCATGATCACAGAAACCATCATTGAAACTGAGAAACCAAAAGTGGCACCTGCACCAGCCAGGCCTTCAGGCCCCAGCAAAGCTTTGAAACTTGGAGCCAAAGGAAAGGAAGTAGATAACTTTGTGGACAAATTGAAATCTGAAGGTGAAACTATCATGTCCTCTAATGTGGGCAAACGTACCTCTGAGACAACCAAAGTTCATGCTCTACCTATTAATATGGAGAGTGTGCATATGAAGATTGAAGAAAAGATCACTCTAACCTGTGGACGAGATGGAGGACTACAGAATATGGAGTTGCATGGCATGATCATGCTTAGGATCTCAGATGACAAATTTGGCCGAATTCGTCTTCATGTGGAAAATGAAGATAAGAAAGGAGTGCAGCTACAAACCCATCCAAATGTGGATAAAAAACTTTTCACTTCAGAGTCCCTAATTGGCTTGAAGAATCCAGAAAAGTCATTTCCAGTCAACAGTGATGTAGGGGTGCTGAAGTGGAGACTACAAACCACAGAGGAATCTTTTATTCCAGTGACAATTAATTGCTGGCCCTCAGAAAGTGGAAATGGCTGTGATATCAACATAGAATATGAGCTACAGGAAGATAATTTAGAGCTGAATGACGTGGTTATCACCATCCCACTCCCATCGGGTGTCGGTGCTCCTGTGATTGGTGAGATCGATGGGGAGTATCGACATGACAGTCGACGAAATACCTTGGAGTGGTGCCTGCCAGTGATTGATGCCAAAAATAAGAGTGGCAGCCTGGAGTTTAGTATCGCTGGGCAGCCCAATGACTTCTTCCCTGTTCAAGTTTCCTTCATCTCCAAAAAGAATTACTGTAACATACAGGTTACCAAAGTGACCCAGGTAGATGGAAACAGTCCGGTCAGGTTTTCCACAGAGACCACTTTCCTAGTGGATAAGTATGAAATTCTGTGA

Related Sequences

XP_004856773.1 Protein

Arcn1 PREDICTED: coatomer subunit delta [Heterocephalus glaber]

Length: 511 aa      View alignments
>XP_004856773.1
MVLLAAAVCTKAGKAIVSRQFVEMTRTRIEGLLAAFPKLMNTGKQHTFVETESVRYVYQPMEKLYMVLITTKNSNILEDLETLRLFSRVIPEYCRALEENEISEHCFDLIFAFDEIVALGYRENVNLAQIRTFTEMDSHEEKVFRAVRETQEREAKAEMRRKAKELQQARRDAERQGKKAPGFGGFGSSAVSGGSTAPMITETIIETEKPKVAPAPARPSGPSKALKLGAKGKEVDNFVDKLKSEGETIMSSNVGKRTSETTKVHALPINMESVHMKIEEKITLTCGRDGGLQNMELHGMIMLRISDDKFGRIRLHVENEDKKGVQLQTHPNVDKKLFTSESLIGLKNPEKSFPVNSDVGVLKWRLQTTEESFIPVTINCWPSESGNGCDINIEYELQEDNLELNDVVITIPLPSGVGAPVIGEIDGEYRHDSRRNTLEWCLPVIDAKNKSGSLEFSIAGQPNDFFPVQVSFISKKNYCNIQVTKVTQVDGNSPVRFSTETTFLVDKYEIL