Details from NCBI annotation

Gene Symbol Amica1
Gene Name adhesion molecule, interacts with CXADR antigen 1
Entrez Gene ID 101709422

Database interlinks

Part of NW_004624784.1 (Scaffold)

For more information consult the page for NW_004624784.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

AMICA1 ENSCPOG00000010118 (Guinea pig)

Gene Details

adhesion molecule, interacts with CXADR antigen 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000009086, Guinea pig)

Protein Percentage 72.58%
CDS Percentage 80.91%
Ka/Ks Ratio 0.49613 (Ka = 0.1842, Ks = 0.3712)

AMICA1 ENSG00000160593 (Human)

Gene Details

adhesion molecule, interacts with CXADR antigen 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000348635, Human)

Protein Percentage 64.71%
CDS Percentage 77.18%
Ka/Ks Ratio 0.7014 (Ka = 0.2653, Ks = 0.3782)

Amica1 ENSMUSG00000048534 (Mouse)

Gene Details

adhesion molecule, interacts with CXADR antigen 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000052033, Mouse)

Protein Percentage 57.92%
CDS Percentage 71.31%
Ka/Ks Ratio 0.56123 (Ka = 0.3275, Ks = 0.5835)

Amica1 ENSRNOG00000026702 (Rat)

Gene Details

adhesion molecule, interacts with CXADR antigen 1

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000007588, Rat)

Protein Percentage 60.0%
CDS Percentage 72.27%
Ka/Ks Ratio 0.49145 (Ka = 0.3005, Ks = 0.6114)

Genome Location

Sequence Coding sequence

Length: 1128 bp    Location: 13623593..13601368   Strand: -
>XM_004856692.1
ATGTTTTGTCCACTGAAGCTCATCCTGATGCCAGTGTTGCTGGATTATTCCTTGGGCCTCAGTGACTTGACTGCTTTCTACCCTGAGCTAACAGTCCATGTGGGTGATTCAGCTCTAATGGGATGTGTTATCCAGAGCACTGAAGGAAAAAGCGTGACCAAGGTAGACTGGATACACTCACGGGGACAGCATGTCAAGGATGAATATGTGCTATACTATTATGCCAACATGAGTGTGCCTGCTGGACGCTTCCAGAACCGTTCACACTTGGTAGGCGATGTCTCTCACAGTGATGGTTCTCTCCTGCTCCAAGATGTGCAAGAGGCTGATCGGGGAATCTATACCTGTGAACTCTACCTTGGAAAGGAGGGCAAGGTGTTTAAAAAAGCAATGGTGCTGCATGTGCTACCAGAGGATCCCAAAGAGCTCATTGTCCGCGTGGGTGAGTCAGCTCTGATGGAATGTCATTTCCAGAGCACAGAAGAGAAACGTGTGACCAAGGTAGACTGGATGTTCTCTTCAGGACAGCATGCCAGGGAGGAGGTTGTTTTACTCTATAACCTCAACAGGCCTATGAGGTATCCCCAGTACCAGGGCCGCTTCCAGAACCGTGTAAACCTGGTGGGGGACATTGCCCACAATGATGGCGCCATCATGCTCCAGAGAGTGAAGGAGTCTGACGAGGGAAACTACACCTGTAGAATCTACTTGGGGAGCCTGATGTTCAGGAAAACCCTTGCTCTGCATGTGATCCTGGAAAAACCTCAAACAACCTCTAGACCTGAGGTCCTGGGAGGAAATCATGTGGTGATCATTGTGGGGATTGTCTGCATCACTCTCCTGCTGCTCACTGGTTTGATACTGATTCTGAAGAAGACTCACAGGAATGAGAGTTCAGGATGTTCTACGACCTTGATGAAAACTCTGGAGGACACAAAGAAGGCTAATCCAGAGAAACATGTTTACTCCTCAATAACTACATGGGAGATGACAGAAGAACCAAGTGGAAAACCAGACAGCACCTACATGATCATGCACCCAGTTCAATCCTCTCTGACGTCAGATCCAAATAACCTACTTGGAAAAAAGACAAGTTGGGAAATTCCCAAAACAGACCAAGCTTTTTGA

Related Sequences

XP_004856749.1 Protein

Amica1 PREDICTED: junctional adhesion molecule-like [Heterocephalus glaber]

Length: 375 aa      View alignments
>XP_004856749.1
MFCPLKLILMPVLLDYSLGLSDLTAFYPELTVHVGDSALMGCVIQSTEGKSVTKVDWIHSRGQHVKDEYVLYYYANMSVPAGRFQNRSHLVGDVSHSDGSLLLQDVQEADRGIYTCELYLGKEGKVFKKAMVLHVLPEDPKELIVRVGESALMECHFQSTEEKRVTKVDWMFSSGQHAREEVVLLYNLNRPMRYPQYQGRFQNRVNLVGDIAHNDGAIMLQRVKESDEGNYTCRIYLGSLMFRKTLALHVILEKPQTTSRPEVLGGNHVVIIVGIVCITLLLLTGLILILKKTHRNESSGCSTTLMKTLEDTKKANPEKHVYSSITTWEMTEEPSGKPDSTYMIMHPVQSSLTSDPNNLLGKKTSWEIPKTDQAF