Details from NCBI annotation

Gene Symbol Tmprss13
Gene Name transmembrane protease, serine 13, transcript variant X2
Entrez Gene ID 101705956

Database interlinks

Part of NW_004624784.1 (Scaffold)

For more information consult the page for NW_004624784.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TMPRSS13 ENSCPOG00000011938 (Guinea pig)

Gene Details

transmembrane protease, serine 13

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000010740, Guinea pig)

Protein Percentage 78.98%
CDS Percentage 82.38%
Ka/Ks Ratio 0.28731 (Ka = 0.1381, Ks = 0.4805)

TMPRSS13 ENSG00000137747 (Human)

Gene Details

transmembrane protease, serine 13

External Links

Gene Match (Ensembl Protein ID: ENSP00000434279, Human)

Protein Percentage 84.62%
CDS Percentage 85.64%
Ka/Ks Ratio 0.1848 (Ka = 0.0844, Ks = 0.457)

Tmprss13 ENSMUSG00000037129 (Mouse)

Gene Details

transmembrane protease, serine 13

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000034597, Mouse)

Protein Percentage 85.71%
CDS Percentage 85.39%
Ka/Ks Ratio 0.14406 (Ka = 0.0745, Ks = 0.517)

Tmprss13 ENSRNOG00000016397 (Rat)

Gene Details

transmembrane protease, serine 13 (Tmprss13), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000021949, Rat)

Protein Percentage 83.13%
CDS Percentage 83.93%
Ka/Ks Ratio 0.16594 (Ka = 0.0914, Ks = 0.5511)

Genome Location

Sequence Coding sequence

Length: 1563 bp    Location: 13315813..13279146   Strand: -
>XM_004856681.1
ATGGAAAGGGACAGCTGCTGGAACACCTCCCCTGCACGGACACCTCCAGCCCAGGCCTCACCAGCAAGGACACCTCCAGCCCAAGCCTCACCAGCAAGGACACCTCCAGCCCAAGTCTCACCAGCAAGGACACCTCCAGCCCAGGCCTCACCAGCAAGGACACCTCCAGCCCAAGTGTCACCAGCAAGGACATCTTCAGCTCAGGCCTCTCCTGCAAGGACATCTCCAGCCCCAACTTCTTCCACCCGGAAATCACCTTCCAGGTCATCGTCTAGCAGGTCATCTGCCAAGTCAGCCTCCACAACATCCTCCCCGACAAAAGCATATCTTGTTAGAGCAACACCAGTTGCTGTCCCAATCCAAGCATCTCCTGCCAGGTCAGCAACAGCTGCCAGGACCACCAGGCAGAGGCTAGTCTTCTTCTGGCAAGGCCACACAGGGATCAAGTATAAGGAGGCAGTAGAGAGCTGCCCCATACATGCCGTTCGCTGTGATGGGGTGCTGGACTGCAAGCTGCGGAGTGATGAGCTAGGCTGTGTGAGGTTTGACTGGGACAAATCTCTGCTTAAAGTCTACTCTGGATCCTCCCATGAGTGGCTTCCAATCTGCAGCAGCAGCTGGAATGACTCTGACTCTCAGAAGACCTGCCAGCAGCTGGGGTTTGAGAGTGCTTACCGGACAGCTGAGGTGGCTCACAGGGATTTTTCCAGCAGCTTCTCAATCTCTGAATACAACTCCACCATCCAGGAAAGCCTCCACAGGTCTGAATGCCCTTCCCAGCGGTACGTCTCTCTCCAGTGTTCCCACTGTGGACTGAGAGCCATGACTGGGAGGATCGTGGGAGGGGTGCTGACCTCAGGGAGCAAGTGGCCCTGGCAAGTGAGTCTGCACTACGGCACCACCCACATCTGCGGGGGCACACTCATCGACCCCCAGTGGGTGCTCACCGCTGCCCACTGCTTCTTTGTGACTCGGGAGAAGATGCTGGAGGGCTGGAAGGTGTATGTAGGCACCAACAACCTGAAGCAGCTGCCTGAGGCAGCCTCCATCGCCCAGATCATTATCAATAGCAATTACACCGATGAGCAGGATGACTATGACATTGCCCTCATGAGGCTCTCCAAGCCCTTGACCCTATCCACGCACATCCACCCTGTCTGCCTCCCCATGCACGGACAGACCTTTAGCCTTAACAAGACCTGTTGGATCACAGGCTTTGGCAAGACCAAAGAAACGGATGAGAAGACATCGCCCTTCCTCCGGGAGGTGCAGGTCAACCTTATCGACTTCAAGGAGTGTAATGACTACTTGGTCTATGACAACTACCTCACCCCAAGGATGATGTGTGCTGGGGACCTTCGAGGAGGAAGAGACTCCTGCCAGGGAGACAGTGGGGGGCCTCTTGTCTGTGAGCAGAACAACCGCTGGTACCTGGCAGGCGTCACCAGCTGGGGCACAGGCTGTGGTCAGAGAAACAAACCTGGTGTGTACACCAAAGTGTCAGAAGTCCTTCCCTGGATCTACACAAAGATGGAGAGTGAGGTGCGCTTCCGAAAATCCTAA

Related Sequences

XP_004856738.1 Protein

Tmprss13 PREDICTED: transmembrane protease serine 13 isoform X2 [Heterocephalus glaber]

Length: 520 aa      View alignments
>XP_004856738.1
MERDSCWNTSPARTPPAQASPARTPPAQASPARTPPAQVSPARTPPAQASPARTPPAQVSPARTSSAQASPARTSPAPTSSTRKSPSRSSSSRSSAKSASTTSSPTKAYLVRATPVAVPIQASPARSATAARTTRQRLVFFWQGHTGIKYKEAVESCPIHAVRCDGVLDCKLRSDELGCVRFDWDKSLLKVYSGSSHEWLPICSSSWNDSDSQKTCQQLGFESAYRTAEVAHRDFSSSFSISEYNSTIQESLHRSECPSQRYVSLQCSHCGLRAMTGRIVGGVLTSGSKWPWQVSLHYGTTHICGGTLIDPQWVLTAAHCFFVTREKMLEGWKVYVGTNNLKQLPEAASIAQIIINSNYTDEQDDYDIALMRLSKPLTLSTHIHPVCLPMHGQTFSLNKTCWITGFGKTKETDEKTSPFLREVQVNLIDFKECNDYLVYDNYLTPRMMCAGDLRGGRDSCQGDSGGPLVCEQNNRWYLAGVTSWGTGCGQRNKPGVYTKVSEVLPWIYTKMESEVRFRKS