Details from NCBI annotation

Gene Symbol Pafah1b2
Gene Name platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa), transcript variant X2
Entrez Gene ID 101697537

Database interlinks

Part of NW_004624784.1 (Scaffold)

For more information consult the page for NW_004624784.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PAFAH1B2 ENSCPOG00000013622 (Guinea pig)

Gene Details

platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000012263, Guinea pig)

Protein Percentage 98.51%
CDS Percentage 95.71%
Ka/Ks Ratio 0.05673 (Ka = 0.0075, Ks = 0.1321)

PAFAH1B2 ENSG00000168092 (Human)

Gene Details

platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)

External Links

Gene Match (Ensembl Protein ID: ENSP00000435289, Human)

Protein Percentage 98.69%
CDS Percentage 93.16%
Ka/Ks Ratio 0.02455 (Ka = 0.0064, Ks = 0.2607)

Pafah1b2 ENSMUSG00000003131 (Mouse)

Gene Details

platelet-activating factor acetylhydrolase, isoform 1b, subunit 2

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000127851, Mouse)

Protein Percentage 98.25%
CDS Percentage 90.98%
Ka/Ks Ratio 0.02308 (Ka = 0.0086, Ks = 0.3731)

Pafah1b2 ENSRNOG00000018032 (Rat)

Gene Details

platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (Pafah1b2), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000024828, Rat)

Protein Percentage 98.25%
CDS Percentage 91.7%
Ka/Ks Ratio 0.02783 (Ka = 0.0088, Ks = 0.3178)

Genome Location

Sequence Coding sequence

Length: 690 bp    Location: 12583113..12619944   Strand: +
>XM_004856653.1
ATGAGCCAAGGAGATTCAAACCCAGCAGCTATTCCACATGCAGCGGAGGATGTTCAAGGAGATGACAGATGGATGTCTCAGCACAACAGATTTGTCTTGGATTGTAAAGACAAAGAACCCGATGTACTGTTTGTAGGAGACTCCATGGTACAGTTAATGCAGCAGTATGAGATATGGCGAGAGCTTTTTTCCCCACTTCATGCACTTAATTTTGGAATTGGGGGAGATACGACAAGACATGTTTTATGGAGACTAAAGAATGGAGAACTGGAAAACATTAAACCTAAGGTCATTGTTGTCTGGGTGGGAACAAACAACCATGAAAATACAGCAGAAGAAGTAGCAGGTGGTATCGAGGCCATTGTACGACTTATCAACACAAGGCAGCCACAAGCCAAAATCATTGTATTGGGTTTATTACCTCGAGGTGAGAAGCCCAACCCTTTGAGGCAAAAGAATGCCAAGGTGAACCAACTTCTCAAGGTTTCTTTGCCGAAGCTCGCCAACGTGCAGCTCCTGGATACAGATGGGGGCTTCGTGCACTCGGACGGTGCCATCTCCTGCCATGACATGTTTGATTTCCTGAATCTCACAGGAGGGGGCTATGCAAAAATCTGCAAACCCCTCCATGAACTGATCATGCAGTTGCTGGAGGAAACACCAGAGGAGAAACAGACCACCATTGCCTGA

Related Sequences

XP_004856710.1 Protein

Pafah1b2 PREDICTED: platelet-activating factor acetylhydrolase IB subunit beta isoform X2 [Heterocephalus glaber]

Length: 229 aa      View alignments
>XP_004856710.1
MSQGDSNPAAIPHAAEDVQGDDRWMSQHNRFVLDCKDKEPDVLFVGDSMVQLMQQYEIWRELFSPLHALNFGIGGDTTRHVLWRLKNGELENIKPKVIVVWVGTNNHENTAEEVAGGIEAIVRLINTRQPQAKIIVLGLLPRGEKPNPLRQKNAKVNQLLKVSLPKLANVQLLDTDGGFVHSDGAISCHDMFDFLNLTGGGYAKICKPLHELIMQLLEETPEEKQTTIA