Details from NCBI annotation

Gene Symbol Apoa1
Gene Name apolipoprotein A-I
Entrez Gene ID 101725714

Database interlinks

Part of NW_004624784.1 (Scaffold)

For more information consult the page for NW_004624784.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

APOA1 ENSCPOG00000020511 (Guinea pig)

Gene Details

apolipoprotein A-I

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000014840, Guinea pig)

Protein Percentage 63.53%
CDS Percentage 79.35%
Ka/Ks Ratio 0.46213 (Ka = 0.2197, Ks = 0.4755)

APOA1 ENSG00000118137 (Human)

Gene Details

apolipoprotein A-I

External Links

Gene Match (Ensembl Protein ID: ENSP00000236850, Human)

Protein Percentage 65.53%
CDS Percentage 77.78%
Ka/Ks Ratio 0.19242 (Ka = 0.1927, Ks = 1.0015)

Apoa1 ENSMUSG00000032083 (Mouse)

Gene Details

apolipoprotein A-I

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000034588, Mouse)

Protein Percentage 59.09%
CDS Percentage 73.23%
Ka/Ks Ratio 0.31641 (Ka = 0.2884, Ks = 0.9113)

Apoa1 ENSRNOG00000045679 (Rat)

Gene Details

apolipoprotein A-I (Apoa1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000065206, Rat)

Protein Percentage 59.85%
CDS Percentage 71.94%
Ka/Ks Ratio 0.28743 (Ka = 0.2955, Ks = 1.0279)

Genome Location

Sequence Coding sequence

Length: 795 bp    Location: 12251138..12249283   Strand: -
>XM_004856644.1
ATGAAAGCTGTGGTGCTGGCTGTGGCTGTGCTCTTCCTGACTGGGAGCCAGGCTCGGCACTTCTGGCAAGGAGATGAGCCCCAGACCTCATGGGACCGCATGAAGGATTTTGCTGCCCTGTATGTGGATGCAATCCAAGAGAGTGGCAAAGACTGTGCGGCCCAGCTGGATGCCTCTGCCTTGGGAAAACAGCTAAACCTGAATCTCCTGGCCAACTGGAACACCTTGACGTCCACTTTCAATAATCTGCGGGAGCAGCTTGGTTCGGTGACCAAGGAGTTCTGGGATAACCTGGGAGAAGACACAGTATGGCTGAGGCAGCAGATGAACAAGGATCTGGAGGAGGTAAAGCAGAAAGTGCAGTCCTACCTGGACAACTTCCAGAAGAAGGTGAACGAAGAGGTGGAGCGCTACCGTGATAAAGTACAGCCACTGGGCAAGGAGCTGCACAAAGACGCCCAACAGAAGCTGAAGGAGCTGCAGGAGAAGCTGGCCCCGCTGGGCCAGGACATCCGCCAACGCGCACGCGAATACGTGGACGCCCTGCGCACGCACCTGGGGTCCTACACCCAGGGGATGCGCCAGGGCCTGGCGAAGCGGTTGGAGGCGCTCAAGGAGAGCGCTCCCGTCTCCGAGTACCAGGTCAAGGCCAGCAAGCACCTGAAAACATTTAGCGAGAAGGCGAAGCCCGCGCTGGAGGACCTTCGCCAGGGCCTGATGCCCGTGATGGAGAGCTTGAAGGCCAGCTTCCTGAGCTCCATCGACCAGGCCTCCAAGCAGCTGAGCGCCCAGTGA

Related Sequences

XP_004856701.1 Protein

Apoa1 PREDICTED: apolipoprotein A-I [Heterocephalus glaber]

Length: 264 aa      View alignments
>XP_004856701.1
MKAVVLAVAVLFLTGSQARHFWQGDEPQTSWDRMKDFAALYVDAIQESGKDCAAQLDASALGKQLNLNLLANWNTLTSTFNNLREQLGSVTKEFWDNLGEDTVWLRQQMNKDLEEVKQKVQSYLDNFQKKVNEEVERYRDKVQPLGKELHKDAQQKLKELQEKLAPLGQDIRQRAREYVDALRTHLGSYTQGMRQGLAKRLEALKESAPVSEYQVKASKHLKTFSEKAKPALEDLRQGLMPVMESLKASFLSSIDQASKQLSAQ