Details from NCBI annotation

Gene Symbol Apoa5
Gene Name apolipoprotein A-V, transcript variant X1
Entrez Gene ID 101723166

Database interlinks

Part of NW_004624784.1 (Scaffold)

For more information consult the page for NW_004624784.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

APOA5 ENSCPOG00000014444 (Guinea pig)

Gene Details

apolipoprotein A-V

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000013010, Guinea pig)

Protein Percentage 80.43%
CDS Percentage 84.06%
Ka/Ks Ratio 0.19205 (Ka = 0.1118, Ks = 0.5821)

APOA5 ENSG00000110243 (Human)

Gene Details

apolipoprotein A-V

External Links

Gene Match (Ensembl Protein ID: ENSP00000445002, Human)

Protein Percentage 74.79%
CDS Percentage 80.37%
Ka/Ks Ratio 0.19079 (Ka = 0.1528, Ks = 0.8008)

Apoa5 ENSMUSG00000032079 (Mouse)

Gene Details

apolipoprotein A-V

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000113413, Mouse)

Protein Percentage 71.9%
CDS Percentage 75.48%
Ka/Ks Ratio 0.13336 (Ka = 0.1889, Ks = 1.4162)

Apoa5 ENSRNOG00000018436 (Rat)

Gene Details

apolipoprotein A-V (Apoa5), transcript variant 2, mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000024918, Rat)

Protein Percentage 69.97%
CDS Percentage 73.0%
Ka/Ks Ratio 0.12797 (Ka = 0.2126, Ks = 1.6615)

Genome Location

Sequence Coding sequence

Length: 1221 bp    Location: 12215809..12213748   Strand: -
>XM_004856637.1
ATGGGAGGCAGGAAGACAGAGTCCATACTGCAAGCATGGCTGCAGTCCTTACCTGGGTTCTGGTCCTGCTCTCAGGTGAGTCCACAACCTGACTTCAATGTAAGCATGTGGGTGGAGACTGGACTGAGCAGGCCTAACCACCTCATCTTCTCCACAGCGTTTTCAGTTACCCACACACGGAAAGGCTTCTGGGACTACTTCAGCCAGAGCAGTTGGGACAAAGGTGTGATGGAGCAGGTCCAACAGCAGAAGCAGGCCCAGGACCATGTGAGGCTGAAAGACAGCCTTGAGCAAGATCTCAGCAATATGAACAAATTCCTGGAGAAGCTGGGCCCCCTGAGTGGGCCGGGGAAGGAGCCCCCTCTGCGGGCCCAGGACCAGGAGGGCATGAGGCAGCAGCTGCAGGAGGAGCTGGAGCAGGTGAGGACTCGCCTGCAGCCCTACATGGCGGAGGTACACGAACTGGTGGGCTGGAACTTAGAGGATCTGCGACGGCAGCTGAAACCCTACACAGTAGAGCTAATGGAGCAGGTGGCCCTGCGTGTACAGGAGCTGCAGGAGCAGTTGCGTGTGGTAGGGGAAGGTACAAAGGCCCAGGTGCTGGGCGGCTTGGATGAGGCACTGGGCCTGCTGCAAGACATGCCTAGCCGCGTGCTGCACCACACTAGCCGCGTCAAAGAGCTCTTCCACCCCTATGCTGAGCGCCTGGTGCGTGGCATCGGGCGCCACATGCAGGAACTGCACCGCAGCGTGACTCCACATGCTGCTGCCAGCCCAGCCCGGCTCAGCCGCTGCGTGCAGGCGCTCTCGCACAAGCTCACGCTCAAGGCCAAGGCCCTGCATGCGGGCATTCAGCAGAACCTGGACCAGCTAGGCAAAGGGCTCAGTGCCTTTGTACACACTAGCGCAGACTGGGCCGAGGAGGGGGCCAGCCTGGGCCCCCACATGCTCTCTGAGGAGGTACGCCAGCGACTCCAGGCTTTTCGCCACGACACCTTTGAGCAAATCTCTCTCTTCACACAAGCCATTGACCAGGAGACTGAGGAGATCCAGCAGCAGCTGGCACCAACCCCACCCGGCCACAGTGCCTTCGCCCCTGCGTTCCCAGAAGTGGATGGCGGCAAGGCCCTGAGCAAGCTGCAGGCCCGTCTGGACGACCTGTGGGAAGACATCACCTACAGCCTTCATGACCAGAGCCATAGTGATCTAGGAGAACCCTGA

Related Sequences

XP_004856694.1 Protein

Apoa5 PREDICTED: apolipoprotein A-V isoform X1 [Heterocephalus glaber]

Length: 406 aa      View alignments
>XP_004856694.1
MGGRKTESILQAWLQSLPGFWSCSQVSPQPDFNVSMWVETGLSRPNHLIFSTAFSVTHTRKGFWDYFSQSSWDKGVMEQVQQQKQAQDHVRLKDSLEQDLSNMNKFLEKLGPLSGPGKEPPLRAQDQEGMRQQLQEELEQVRTRLQPYMAEVHELVGWNLEDLRRQLKPYTVELMEQVALRVQELQEQLRVVGEGTKAQVLGGLDEALGLLQDMPSRVLHHTSRVKELFHPYAERLVRGIGRHMQELHRSVTPHAAASPARLSRCVQALSHKLTLKAKALHAGIQQNLDQLGKGLSAFVHTSADWAEEGASLGPHMLSEEVRQRLQAFRHDTFEQISLFTQAIDQETEEIQQQLAPTPPGHSAFAPAFPEVDGGKALSKLQARLDDLWEDITYSLHDQSHSDLGEP