Details from NCBI annotation

Gene Symbol Htr3a
Gene Name 5-hydroxytryptamine (serotonin) receptor 3A, ionotropic, transcript variant X1
Entrez Gene ID 101714088

Database interlinks

Part of NW_004624784.1 (Scaffold)

For more information consult the page for NW_004624784.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

Htr3a ENSCPOG00000010833 (Guinea pig)

Gene Details

5-hydroxytryptamine receptor 3A precursor

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000009728, Guinea pig)

Protein Percentage 85.86%
CDS Percentage 86.95%
Ka/Ks Ratio 0.2381 (Ka = 0.0898, Ks = 0.3772)

HTR3A ENSG00000166736 (Human)

Gene Details

5-hydroxytryptamine (serotonin) receptor 3A, ionotropic

External Links

Gene Match (Ensembl Protein ID: ENSP00000347754, Human)

Protein Percentage 88.49%
CDS Percentage 87.45%
Ka/Ks Ratio 0.11516 (Ka = 0.0616, Ks = 0.5353)

Htr3a ENSMUSG00000032269 (Mouse)

Gene Details

5-hydroxytryptamine (serotonin) receptor 3A

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000003826, Mouse)

Protein Percentage 83.84%
CDS Percentage 83.03%
Ka/Ks Ratio 0.12913 (Ka = 0.0933, Ks = 0.7222)

Htr3a ENSRNOG00000006595 (Rat)

Gene Details

5-hydroxytryptamine (serotonin) receptor 3A, ionotropic (Htr3a), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000008965, Rat)

Protein Percentage 84.68%
CDS Percentage 83.78%
Ka/Ks Ratio 0.11032 (Ka = 0.0824, Ks = 0.7468)

Genome Location

Sequence Coding sequence

Length: 1473 bp    Location: 9470344..9483595   Strand: +
>XM_004856612.1
ATGTCGCTGTGGCTCCAGCAGGCGCTGCTGGCCTTGCTCCTCCCCACATTGCTGGCACAGGGAGAAGCCAGGGGGAGGGGGACAGCCCAGGCTCACAGCTTCACCAGGCCGGCTCTGCAGAGGCTGTCCGACCACCTCCTTGCTGACTACAGGAAGGGCGTCCGGCCCGTGCGAGACTGGAGGAAACCCACCACCATCTCCATCGATGTCATCGTCTATGCCATCCTCAGTGTGGATGAGAAGAATCAGGTACTGACCACCTACATCTGGTACCGGCAGTTCTGGGCTGATGAATTTCTCCAGTGGAACCCTGAGGACTTTGACAACATCACCAAGTTGTCCATTCCCACGGACAGCATCTGGGTCCCAGACATTCTCATCAACGAATTCGTGGATGTGGGGAAATCTCCGAGTATCCCATACGTTTATGTTCAGCATCAAGGTGAGGTACAGAACTACAAGCCCCTGCAGGTGGTGACTGCCTGTAGCCTCGACATCTATAACTTTCCCTTCGATGTACAGAACTGCTCGCTGACCTTCACCAGCTGGCTGCACAATATCCAGGACATCAACATCTCCCTGTGGCGCTTGCCGGAGAAAGTGAAGTCTGACAAGAGCGTCTTCATGAATCAGGGCGAGTGGGAGTTGCTGGGGGTGCTGACCCAGTTTCTGGAGTTCTGTGACAGGGAAAGCAGGGGCTGCTATGCAGAAATGAAGTTCTATGTGGTCATCCGCCGGCGGCCCCTATTCTATGCAGTCAGCTTGCTGCTGCCCAGTATTTTCCTCATGATCATGGACATTGTGGGCTTCTACCTGCCCCCGGATAGTGGTGAGAGGGTCTCCTTCAAGATCACACTCCTCCTGGGCTACTCAGTCTTCTTGATCATTGTGTCCGACACACTGCCAGCCACTGCCATCGGCACTCCCCTCATCGGTGTCTATTTTGTGGTGTGCATGGCTCTTCTGGTGATAAGTTTGGCAGAGACCATCCTCATTGTGCGGCTGGTACACAAGCAAGACCTGCAACAGCCTGTTCCTCTCTGGCTGCGGCACCTGGTTCTAGAGAGAATCGCCCAACTACTCTGCCTAGGAGAGCAGTTAACCTCCCACAGGCCCCCACCCACCTTGCAAGCCACCAAGATTGAAGACTGCTCAGGCCCTACCCTTCTTCCAGCCATGGGAAACCACTGCAGCCATTTGGGAGGACCCCAAGACTTGGAGAAGACCCCAAGGGGCAGAGGCAGTCCTCCTCCACCACCACAGGAGGCCTCCCTGGCTGTGCGTGGGCTGCTGCAGGAGCTGTCCTCCATCCGGCACTTCCTGGAGAAGCGGGATGAGATCCGGGAGGTGGCCCGGGACTGGCTGCGTGTGGGCTCTGTGCTGGACAAGCTGCTCTTCCGAGTCTACCTGCTGGCAGTGCTGACCTATAGCATCACCTTGGTCACACTCTGGTCTATCTGGCATTATTCCTGA

Related Sequences

XP_004856669.1 Protein

Htr3a PREDICTED: 5-hydroxytryptamine receptor 3A isoform X1 [Heterocephalus glaber]

Length: 490 aa      View alignments
>XP_004856669.1
MSLWLQQALLALLLPTLLAQGEARGRGTAQAHSFTRPALQRLSDHLLADYRKGVRPVRDWRKPTTISIDVIVYAILSVDEKNQVLTTYIWYRQFWADEFLQWNPEDFDNITKLSIPTDSIWVPDILINEFVDVGKSPSIPYVYVQHQGEVQNYKPLQVVTACSLDIYNFPFDVQNCSLTFTSWLHNIQDINISLWRLPEKVKSDKSVFMNQGEWELLGVLTQFLEFCDRESRGCYAEMKFYVVIRRRPLFYAVSLLLPSIFLMIMDIVGFYLPPDSGERVSFKITLLLGYSVFLIIVSDTLPATAIGTPLIGVYFVVCMALLVISLAETILIVRLVHKQDLQQPVPLWLRHLVLERIAQLLCLGEQLTSHRPPPTLQATKIEDCSGPTLLPAMGNHCSHLGGPQDLEKTPRGRGSPPPPPQEASLAVRGLLQELSSIRHFLEKRDEIREVARDWLRVGSVLDKLLFRVYLLAVLTYSITLVTLWSIWHYS