Details from NCBI annotation

Gene Symbol Bco2
Gene Name beta-carotene oxygenase 2, transcript variant X1
Entrez Gene ID 101704023

Database interlinks

Part of NW_004624784.1 (Scaffold)

For more information consult the page for NW_004624784.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ENSCPOG00000009905 (Guinea pig)

Gene Details

Uncharacterized protein

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000008888, Guinea pig)

Protein Percentage 84.76%
CDS Percentage 86.99%
Ka/Ks Ratio 0.25526 (Ka = 0.0898, Ks = 0.352)

Bco2 ENSMUSG00000032066 (Mouse)

Gene Details

beta-carotene oxygenase 2

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000112727, Mouse)

Protein Percentage 84.59%
CDS Percentage 83.83%
Ka/Ks Ratio 0.16877 (Ka = 0.0938, Ks = 0.5557)

Bco2 ENSRNOG00000038746 (Rat)

Gene Details

beta-carotene oxygenase 2 (Bco2), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000055965, Rat)

Protein Percentage 83.08%
CDS Percentage 83.71%
Ka/Ks Ratio 0.18449 (Ka = 0.0988, Ks = 0.5358)

Genome Location

Sequence Coding sequence

Length: 1623 bp    Location: 7324994..7353664   Strand: +
>XM_004856584.1
ATGACATATACTGAGAAAAGAGCCATGTTGGGCCAGCAGCAGAGTCTGCCATGTATTGCACCCCTGTTGACCCCGATGGAGGAGACACCACATATTATCTCTGCTCGAGTCCAGGGAAATATTCCTAAGTGGCTCAGTGGCTATCTACTTCGAGTTGGACCTGGGAAATTTGAGTTTGGGAAGGATAAGTATAGTCACTGGTTTGATGGAATGGCTTTGCTTCACCAGTTCAGGATAGAGAAGGGTACAGTTACATATAGGAGCAAATTTCTACAGAGTGATACGTATAAGACCAATAGTGCTCACAATAGAATTGTAATCTCAGAATTTGGCACACTGGCTCTTCCTGACCCATGCAAGAATATTTTTGAACGTTTCATGTCAAAGTTTGAGATGCCTGCTATGACTGACAATACCAATGTCAACTTTGTGCAGTACAAGGATGATTACTACATGAGCACTGAGACCAATTTTATGAACAAAGTGGACATTGAAACTTTGGAAAGAACAGAAAAGGTAGATTGGAGAAAATTTATTGCTGTGAATGGAGCAACTGCACATCCTCATTATGACCCAGATGGAACAGTATACAATATGGGAAACTCCTATGGCCCACAAGGTTCCTGTTATAACGTTATTCGGGTTCCTCCAGAGAAGGTGGACCCTGGGGAGACAATCCATGGAGCCCAGGTGATATGTTCTATTGCTTCTACAGAGAAGATGAAGCCTTCCTACTACCATAGCTTTGGAATGACAAGAAACTACATAATCTTCATTGAACAGCCTCTCAAAATGAAGCTGTGGAAAATTATCACTTCTAAAATTCGGGGAAAGGCTTTTTCAGATGGAATAAGCTGGAAACCCCAGTATAATACACGGTTTCATGTGGTGAATAAATGCACTGGACAGATTCTTCCAGGGATGTATTACAGCAAACCTTTTGTTACTTTTCATCAAATCAATGCTTTTGAGGACCAGGGCTGTATTGTAATTGATTTGTGTTGTCAAGAAGATGGAAGAAGCCTAGATGTTTACCAACTACAGAATCTCAGAAAATCTGGGGAAGGGCTTGATCAGGTCTATAATTCAGTAGCCAGATCTTTTCCTCGAAGGTTTGTTTTGCCCTTAGATGTCAGTGTGAATGCTGTTGAGGGAGAGAACCTCAGTCCATTGTCCTATTCTTCAGCCAGTGCTGTGAAGCAGGCTGATGGAAAGATCTGGTGTGTCCATGAAAATTTACATCATGAAGACCTAGAGGAGGAAGGAGGCATTGAATTTCCCCAGATCAACTATGGGCAATTCAGTAGCAAAAAGTATCGTTTCTTTTATGGTTGTGGCTTTCGGCATTTAGTGGGGGATTCTCTGATCAAGGTTGATATGGTGAACAAGACACTGAAGGTTTGGAGAGAAGATGGCTTTTATCCTTCAGAACCTATTTTTGTTCCAGTACCAGGAACAAATAAAGAAGATGGTGGGGTTATTCTTTCTGTTGTGATCACTTCCAACCAGAATGAAAGCAATTTTCTCCTTGTGTTGGATGCCAGGACCTTTGAAGAACTAGGCAGAGCAGCGGTACCTGTGCGAATGCCTTATGGGTTCCATGGCACATTTTTACCCATGTGA

Related Sequences

XP_004856641.1 Protein

Bco2 PREDICTED: beta,beta-carotene 9',10'-oxygenase isoform X1 [Heterocephalus glaber]

Length: 540 aa     
>XP_004856641.1
MTYTEKRAMLGQQQSLPCIAPLLTPMEETPHIISARVQGNIPKWLSGYLLRVGPGKFEFGKDKYSHWFDGMALLHQFRIEKGTVTYRSKFLQSDTYKTNSAHNRIVISEFGTLALPDPCKNIFERFMSKFEMPAMTDNTNVNFVQYKDDYYMSTETNFMNKVDIETLERTEKVDWRKFIAVNGATAHPHYDPDGTVYNMGNSYGPQGSCYNVIRVPPEKVDPGETIHGAQVICSIASTEKMKPSYYHSFGMTRNYIIFIEQPLKMKLWKIITSKIRGKAFSDGISWKPQYNTRFHVVNKCTGQILPGMYYSKPFVTFHQINAFEDQGCIVIDLCCQEDGRSLDVYQLQNLRKSGEGLDQVYNSVARSFPRRFVLPLDVSVNAVEGENLSPLSYSSASAVKQADGKIWCVHENLHHEDLEEEGGIEFPQINYGQFSSKKYRFFYGCGFRHLVGDSLIKVDMVNKTLKVWREDGFYPSEPIFVPVPGTNKEDGGVILSVVITSNQNESNFLLVLDARTFEELGRAAVPVRMPYGFHGTFLPM