Sequence details NCBI ID: XM_004856582.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Il18
Gene Name interleukin 18 (interferon-gamma-inducing factor), transcript variant X3
Entrez Gene ID 101702804

Database interlinks

Part of NW_004624784.1 (Scaffold)

For more information consult the page for NW_004624784.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

IL-18 ENSCPOG00000003179 (Guinea pig)

Gene Details

Cavia porcellus interleukin-18 (Il-18), mRNA.

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000002879, Guinea pig)

Protein Percentage 79.79%
CDS Percentage 87.91%
Ka/Ks Ratio 0.57601 (Ka = 0.1179, Ks = 0.2047)

IL18 ENSG00000150782 (Human)

Gene Details

interleukin 18 (interferon-gamma-inducing factor)

External Links

Gene Match (Ensembl Protein ID: ENSP00000280357, Human)

Protein Percentage 70.98%
CDS Percentage 81.87%
Ka/Ks Ratio 0.68856 (Ka = 0.2024, Ks = 0.294)

Il18 ENSMUSG00000039217 (Mouse)

Gene Details

interleukin 18

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000137193, Mouse)

Protein Percentage 59.47%
CDS Percentage 71.93%
Ka/Ks Ratio 0.4936 (Ka = 0.3218, Ks = 0.652)

Il18 ENSRNOG00000009848 (Rat)

Gene Details

interleukin 18 (Il18), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000013093, Rat)

Protein Percentage 58.33%
CDS Percentage 69.62%
Ka/Ks Ratio 0.40195 (Ka = 0.3415, Ks = 0.8496)

Genome Location

Sequence Coding sequence

Length: 588 bp    Location: 7310711..7294287   Strand: -
Raw sequence   
>XM_004856582.1
ATGATGATGGCTGTTTCTGTCTCAGAAAATGATTGCATCAACTTTGTGGAAATGAAATTTATTGACAATATACTTTACTTTATACCTGAAAATGATGAAAACCTGGAATCAGATTACTTTGGCAAACTTGTACCTAAATTGTCAGTCATACGAAATTTGAAAAACCAAGTCCTCATTGTCGACCGTGAGAAGAAACCTGTGTTTGAGGATATGCCTGATGCTGACATTGCAGATAATGCACCTCAGACTACATTTAACAAATATACATATACCGATAGCCGTGGTAGAGGTATGGCTATAGTCATCTCTGTGATGTGTAACGGAAACCATACTCTCTCCTGTGAGGACAAAACCATTTCCTTTAAGGAAATCAATCCTCCTGATAATATCGTTGACACAAAAAGTGACATCATATTCTTTCAGAGACGTGTTCCAGGACATGATGATAAGATGCAATTTGAGTCTTCATTGTATGAAGGATACTTTCTAGCTTGTCAAAAAGAGAAAGACTTTTACAAACTTATTTTGAAAAAAAAGGATGAATCTGGGGATAAATCTATAATGTTCACTGTCCAAAACAAAGACTAG

Related Sequences

XP_004856639.1 Protein

Il18 PREDICTED: interleukin-18 isoform X3 [Heterocephalus glaber]

Length: 195 aa      View alignments
>XP_004856639.1
MMMAVSVSENDCINFVEMKFIDNILYFIPENDENLESDYFGKLVPKLSVIRNLKNQVLIVDREKKPVFEDMPDADIADNAPQTTFNKYTYTDSRGRGMAIVISVMCNGNHTLSCEDKTISFKEINPPDNIVDTKSDIIFFQRRVPGHDDKMQFESSLYEGYFLACQKEKDFYKLILKKKDESGDKSIMFTVQNKD